RNA–Protein interactions for RNA: ENSMUST00000112366.7

Scn1a-203, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,386 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-203ENSMUST00000112366 SspoQ8CG65 4998 aa1.68□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Fat1A0A1L1SQU7 4645 aa1.67□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Dnah11E9Q7N9 4488 aa1.67□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Dnah9B1AR51 4484 aa1.66□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Dnah1E9Q8T7 4250 aa1.65□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Kmt2aP55200 3966 aa1.64□□□□□ -2.15
Scn1a-203ENSMUST00000112366 Prm1P02319 51 aa1.63□□□□□ -2.15
Scn1a-203ENSMUST00000112366 ApobE9Q414 4505 aa1.61□□□□□ -2.15
Scn1a-203ENSMUST00000112366 Pkhd1E9PZ36 4059 aa1.6□□□□□ -2.15
Scn1a-203ENSMUST00000112366 Dync2h1Q45VK7 4306 aa1.6□□□□□ -2.15
Scn1a-203ENSMUST00000112366 Gm11555B1AQ89 175 aa1.58□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Lce1kJ3QP15 125 aa1.58□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Hectd4E9Q2E4 4418 aa1.58□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Krtap4-16Q91W93 202 aa1.58□□□□□ -2.16
Scn1a-203ENSMUST00000112366 ZanO88799 5376 aa1.57□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Gm11562A0PK51 136 aa1.57□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Gm11938Q9D3H4 131 aa1.56□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Mdn1A2ANY6 5589 aaKnown RBP1.56□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Syne1Q6ZWR6 8799 aa1.56□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Pkd1O08852 4293 aa1.55□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Lce1a1Q9CQH5 143 aa1.54□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Lce1a2Q9D1K4 149 aa1.54□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Mt4P47945 62 aa1.53□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Sprr2bO70554 98 aa1.51□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Gm10061D3Z714 54 aa1.49□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Gm7735D3YX18 52 aa1.49□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Gm11569B1AQB1 180 aa1.48□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Kmt2dQ6PDK2 5588 aa1.48□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Fat2Q5F226 4351 aa1.48□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Pkhd1l1Q80ZA4 4249 aa1.47□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Gm9789Q8BIG3 52 aa1.45□□□□□ -2.18
Scn1a-203ENSMUST00000112366 Gpr98Q8VHN7 6298 aaKnown RBP1.44□□□□□ -2.18
Scn1a-203ENSMUST00000112366 Mt1P02802 61 aaKnown RBP1.41□□□□□ -2.18
Scn1a-203ENSMUST00000112366 Krtap4-6Q3V4B7 195 aa1.4□□□□□ -2.19
Scn1a-203ENSMUST00000112366 Gm39115A0A1B0GSH7 232 aa1.4□□□□□ -2.19
Scn1a-203ENSMUST00000112366 Gm45618A0A1B0GSA0 219 aa1.39□□□□□ -2.19
Scn1a-203ENSMUST00000112366 2300003K06RikA2A4M0 262 aa1.38□□□□□ -2.19
Scn1a-203ENSMUST00000112366 ObscnA2AAJ9 8891 aaKnown RBP1.36□□□□□ -2.19
Scn1a-203ENSMUST00000112366 Gm11596B1AQB0 205 aa1.32□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Hmcn1D3YXG0 5634 aa1.31□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Fsip2A2ARZ3 6995 aa1.31□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Gm11564A2A4L9 201 aa1.3□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Gm11595B1AQA7 289 aa1.3□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Krtap4-8B1AQA8 209 aa1.3□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Krtap4-9B1AQA9 244 aa1.3□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Eppk1Q8R0W0 6548 aa1.3□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Syne2Q6ZWQ0 6874 aaKnown RBP1.29□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Krtap4-13Q9D7P3 165 aa1.28□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Gm11639A0A1D5RLM8 5808 aa1.28□□□□□ -2.21
Scn1a-203ENSMUST00000112366 DstQ91ZU6 7393 aaKnown RBP1.27□□□□□ -2.21
Scn1a-203ENSMUST00000112366 Macf1Q9QXZ0 7354 aaKnown RBP1.26□□□□□ -2.21
Scn1a-203ENSMUST00000112366 Gm11554B1AQB2 190 aa1.21□□□□□ -2.22
Scn1a-203ENSMUST00000112366 Krtap6-3A0A087WQL6 57 aa1.19□□□□□ -2.22
Scn1a-203ENSMUST00000112366 Gm11559Q9D3H7 191 aa1.17□□□□□ -2.22
Scn1a-203ENSMUST00000112366 Muc16A0A140LJ72 8478 aa1.16□□□□□ -2.22
Scn1a-203ENSMUST00000112366 Gm45337A0A1B0GS71 263 aa1.14□□□□□ -2.23
Scn1a-203ENSMUST00000112366 1110025L11RikO09048 78 aa1.13□□□□□ -2.23
Scn1a-203ENSMUST00000112366 Krtap6-5Q925H3 78 aa1.13□□□□□ -2.23
Scn1a-203ENSMUST00000112366 Phgr1Q8K0G7 91 aa1.11□□□□□ -2.23
Scn1a-203ENSMUST00000112366 Gm10229O08631 77 aa1.11□□□□□ -2.23
Scn1a-203ENSMUST00000112366 Krtap20-2E9Q0A8 60 aa1.1□□□□□ -2.23
Scn1a-203ENSMUST00000112366 Gm11567Q9D141 195 aa1.06□□□□□ -2.24
Scn1a-203ENSMUST00000112366 NebE9Q1W3 7152 aa1.05□□□□□ -2.24
Scn1a-203ENSMUST00000112366 Gm11568A2A4M2 211 aa1.05□□□□□ -2.24
Scn1a-203ENSMUST00000112366 Krtap9-1Q64526 186 aa1.05□□□□□ -2.24
Scn1a-203ENSMUST00000112366 AhnakE9Q616 5656 aaKnown RBP1.05□□□□□ -2.24
Scn1a-203ENSMUST00000112366 Krtap5-2Q9D5Z7 189 aa1.03□□□□□ -2.24
Scn1a-203ENSMUST00000112366 Krtap5-1Q64507 230 aa0.97□□□□□ -2.25
Scn1a-203ENSMUST00000112366 Muc19Q6PZE0 7524 aa0.95□□□□□ -2.26
Scn1a-203ENSMUST00000112366 Gm2431E9Q8S1 172 aa0.88□□□□□ -2.27
Scn1a-203ENSMUST00000112366 Gm4553A0A1B0GSA9 284 aa0.87□□□□□ -2.27
Scn1a-203ENSMUST00000112366 Gm29735A0A1B0GT06 219 aa0.87□□□□□ -2.27
Scn1a-203ENSMUST00000112366 Gm10153A0A1B0GRL1 320 aa0.86□□□□□ -2.27
Scn1a-203ENSMUST00000112366 Krtap6-2O08884 159 aa0.85□□□□□ -2.27
Scn1a-203ENSMUST00000112366 Gm40460A0A1B0GR10 244 aa0.82□□□□□ -2.28
Scn1a-203ENSMUST00000112366 Gm7579A0A1B0GRJ4 243 aa0.82□□□□□ -2.28
Scn1a-203ENSMUST00000112366 Krtap5-5Q2TA51 241 aa0.82□□□□□ -2.28
Scn1a-203ENSMUST00000112366 Krtap5-4Q62220 223 aa0.82□□□□□ -2.28
Scn1a-203ENSMUST00000112366 Krtap21-1Q925H4 128 aa0.74□□□□□ -2.29
Scn1a-203ENSMUST00000112366 Gm4559A4IF42 199 aa0.73□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 1300.9 ms