RNA–Protein interactions for RNA: ENSMUST00000112366.7

Scn1a-203, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-203ENSMUST00000112366 SspoQ8CG65 4998 aa1.68□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Fat1A0A1L1SQU7 4645 aa1.67□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Dnah11E9Q7N9 4488 aa1.67□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Dnah9B1AR51 4484 aa1.66□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Dnah1E9Q8T7 4250 aa1.65□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Kmt2aP55200 3966 aa1.64□□□□□ -2.15
Scn1a-203ENSMUST00000112366 Prm1P02319 51 aa1.63□□□□□ -2.15
Scn1a-203ENSMUST00000112366 ApobE9Q414 4505 aa1.61□□□□□ -2.15
Scn1a-203ENSMUST00000112366 Pkhd1E9PZ36 4059 aa1.6□□□□□ -2.15
Scn1a-203ENSMUST00000112366 Dync2h1Q45VK7 4306 aa1.6□□□□□ -2.15
Scn1a-203ENSMUST00000112366 Gm11555B1AQ89 175 aa1.58□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Lce1kJ3QP15 125 aa1.58□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Hectd4E9Q2E4 4418 aa1.58□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Krtap4-16Q91W93 202 aa1.58□□□□□ -2.16
Scn1a-203ENSMUST00000112366 ZanO88799 5376 aa1.57□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Gm11562A0PK51 136 aa1.57□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Gm11938Q9D3H4 131 aa1.56□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Mdn1A2ANY6 5589 aaKnown RBP1.56□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Syne1Q6ZWR6 8799 aa1.56□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Pkd1O08852 4293 aa1.55□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Lce1a1Q9CQH5 143 aa1.54□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Lce1a2Q9D1K4 149 aa1.54□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Mt4P47945 62 aa1.53□□□□□ -2.16
Scn1a-203ENSMUST00000112366 Sprr2bO70554 98 aa1.51□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Gm10061D3Z714 54 aa1.49□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Gm7735D3YX18 52 aa1.49□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Gm11569B1AQB1 180 aa1.48□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Kmt2dQ6PDK2 5588 aa1.48□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Fat2Q5F226 4351 aa1.48□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Pkhd1l1Q80ZA4 4249 aa1.47□□□□□ -2.17
Scn1a-203ENSMUST00000112366 Gm9789Q8BIG3 52 aa1.45□□□□□ -2.18
Scn1a-203ENSMUST00000112366 Gpr98Q8VHN7 6298 aaKnown RBP1.44□□□□□ -2.18
Scn1a-203ENSMUST00000112366 Mt1P02802 61 aaKnown RBP1.41□□□□□ -2.18
Scn1a-203ENSMUST00000112366 Krtap4-6Q3V4B7 195 aa1.4□□□□□ -2.19
Scn1a-203ENSMUST00000112366 Gm39115A0A1B0GSH7 232 aa1.4□□□□□ -2.19
Scn1a-203ENSMUST00000112366 Gm45618A0A1B0GSA0 219 aa1.39□□□□□ -2.19
Scn1a-203ENSMUST00000112366 2300003K06RikA2A4M0 262 aa1.38□□□□□ -2.19
Scn1a-203ENSMUST00000112366 ObscnA2AAJ9 8891 aaKnown RBP1.36□□□□□ -2.19
Scn1a-203ENSMUST00000112366 Gm11596B1AQB0 205 aa1.32□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Hmcn1D3YXG0 5634 aa1.31□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Fsip2A2ARZ3 6995 aa1.31□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Gm11564A2A4L9 201 aa1.3□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Gm11595B1AQA7 289 aa1.3□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Krtap4-8B1AQA8 209 aa1.3□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Krtap4-9B1AQA9 244 aa1.3□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Eppk1Q8R0W0 6548 aa1.3□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Syne2Q6ZWQ0 6874 aaKnown RBP1.29□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Krtap4-13Q9D7P3 165 aa1.28□□□□□ -2.2
Scn1a-203ENSMUST00000112366 Gm11639A0A1D5RLM8 5808 aa1.28□□□□□ -2.21
Scn1a-203ENSMUST00000112366 DstQ91ZU6 7393 aaKnown RBP1.27□□□□□ -2.21
Scn1a-203ENSMUST00000112366 Macf1Q9QXZ0 7354 aaKnown RBP1.26□□□□□ -2.21
Scn1a-203ENSMUST00000112366 Gm11554B1AQB2 190 aa1.21□□□□□ -2.22
Scn1a-203ENSMUST00000112366 Krtap6-3A0A087WQL6 57 aa1.19□□□□□ -2.22
Scn1a-203ENSMUST00000112366 Gm11559Q9D3H7 191 aa1.17□□□□□ -2.22
Scn1a-203ENSMUST00000112366 Muc16A0A140LJ72 8478 aa1.16□□□□□ -2.22
Scn1a-203ENSMUST00000112366 Gm45337A0A1B0GS71 263 aa1.14□□□□□ -2.23
Scn1a-203ENSMUST00000112366 1110025L11RikO09048 78 aa1.13□□□□□ -2.23
Scn1a-203ENSMUST00000112366 Krtap6-5Q925H3 78 aa1.13□□□□□ -2.23
Scn1a-203ENSMUST00000112366 Phgr1Q8K0G7 91 aa1.11□□□□□ -2.23
Scn1a-203ENSMUST00000112366 Gm10229O08631 77 aa1.11□□□□□ -2.23
Scn1a-203ENSMUST00000112366 Krtap20-2E9Q0A8 60 aa1.1□□□□□ -2.23
Scn1a-203ENSMUST00000112366 Gm11567Q9D141 195 aa1.06□□□□□ -2.24
Scn1a-203ENSMUST00000112366 NebE9Q1W3 7152 aa1.05□□□□□ -2.24
Scn1a-203ENSMUST00000112366 Gm11568A2A4M2 211 aa1.05□□□□□ -2.24
Scn1a-203ENSMUST00000112366 Krtap9-1Q64526 186 aa1.05□□□□□ -2.24
Scn1a-203ENSMUST00000112366 AhnakE9Q616 5656 aaKnown RBP1.05□□□□□ -2.24
Scn1a-203ENSMUST00000112366 Krtap5-2Q9D5Z7 189 aa1.03□□□□□ -2.24
Scn1a-203ENSMUST00000112366 Krtap5-1Q64507 230 aa0.97□□□□□ -2.25
Scn1a-203ENSMUST00000112366 Muc19Q6PZE0 7524 aa0.95□□□□□ -2.26
Scn1a-203ENSMUST00000112366 Gm2431E9Q8S1 172 aa0.88□□□□□ -2.27
Scn1a-203ENSMUST00000112366 Gm4553A0A1B0GSA9 284 aa0.87□□□□□ -2.27
Scn1a-203ENSMUST00000112366 Gm29735A0A1B0GT06 219 aa0.87□□□□□ -2.27
Scn1a-203ENSMUST00000112366 Gm10153A0A1B0GRL1 320 aa0.86□□□□□ -2.27
Scn1a-203ENSMUST00000112366 Krtap6-2O08884 159 aa0.85□□□□□ -2.27
Scn1a-203ENSMUST00000112366 Gm40460A0A1B0GR10 244 aa0.82□□□□□ -2.28
Scn1a-203ENSMUST00000112366 Gm7579A0A1B0GRJ4 243 aa0.82□□□□□ -2.28
Scn1a-203ENSMUST00000112366 Krtap5-5Q2TA51 241 aa0.82□□□□□ -2.28
Scn1a-203ENSMUST00000112366 Krtap5-4Q62220 223 aa0.82□□□□□ -2.28
Scn1a-203ENSMUST00000112366 Krtap21-1Q925H4 128 aa0.74□□□□□ -2.29
Scn1a-203ENSMUST00000112366 Gm4559A4IF42 199 aa0.73□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 264.9 ms