RNA–Protein interactions for RNA: ENSMUST00000106550.10

Knop1-204, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Knop1, Length 5,524 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-204ENSMUST00000106550 Gm11596B1AQB0 205 aa4.1□□□□□ -1.75
Knop1-204ENSMUST00000106550 Sprr2hO70559 108 aa4.1□□□□□ -1.75
Knop1-204ENSMUST00000106550 Gm11562A0PK51 136 aa4.09□□□□□ -1.75
Knop1-204ENSMUST00000106550 Krtap31-1Q9D644 177 aa4.09□□□□□ -1.75
Knop1-204ENSMUST00000106550 2300003K06RikA2A4M0 262 aa4.09□□□□□ -1.76
Knop1-204ENSMUST00000106550 Hmcn2A2AJ76 5100 aa4.08□□□□□ -1.76
Knop1-204ENSMUST00000106550 Gm11564A2A4L9 201 aa4.08□□□□□ -1.76
Knop1-204ENSMUST00000106550 Gm11563B1AQ90 168 aa4.08□□□□□ -1.76
Knop1-204ENSMUST00000106550 Gm11595B1AQA7 289 aa4.08□□□□□ -1.76
Knop1-204ENSMUST00000106550 Krtap4-8B1AQA8 209 aa4.08□□□□□ -1.76
Knop1-204ENSMUST00000106550 Krtap4-9B1AQA9 244 aa4.04□□□□□ -1.76
Knop1-204ENSMUST00000106550 Muc5bE9Q5I3 4800 aa4.03□□□□□ -1.76
Knop1-204ENSMUST00000106550 Krtap4-7Q9D732 168 aa4.03□□□□□ -1.76
Knop1-204ENSMUST00000106550 Gm11938Q9D3H4 131 aa4.02□□□□□ -1.77
Knop1-204ENSMUST00000106550 Lce1kJ3QP15 125 aa3.97□□□□□ -1.77
Knop1-204ENSMUST00000106550 Krtap4-13Q9D7P3 165 aa3.95□□□□□ -1.78
Knop1-204ENSMUST00000106550 Rnf213E9Q555 5152 aaKnown RBP3.93□□□□□ -1.78
Knop1-204ENSMUST00000106550 Mt3P28184 68 aa3.87□□□□□ -1.79
Knop1-204ENSMUST00000106550 Ush2AQ2QI47 5193 aa3.85□□□□□ -1.79
Knop1-204ENSMUST00000106550 Syne1Q6ZWR6 8799 aa3.83□□□□□ -1.8
Knop1-204ENSMUST00000106550 Krtap4-16Q91W93 202 aa3.75□□□□□ -1.81
Knop1-204ENSMUST00000106550 Fsip2A2ARZ3 6995 aa3.73□□□□□ -1.81
Knop1-204ENSMUST00000106550 Syne2Q6ZWQ0 6874 aaKnown RBP3.72□□□□□ -1.81
Knop1-204ENSMUST00000106550 SspoQ8CG65 4998 aa3.7□□□□□ -1.82
Knop1-204ENSMUST00000106550 Lce1a1Q9CQH5 143 aa3.66□□□□□ -1.82
Knop1-204ENSMUST00000106550 Krtap6-3A0A087WQL6 57 aa3.62□□□□□ -1.83
Knop1-204ENSMUST00000106550 Mt1P02802 61 aaKnown RBP3.56□□□□□ -1.84
Knop1-204ENSMUST00000106550 Gm11554B1AQB2 190 aa3.54□□□□□ -1.84
Knop1-204ENSMUST00000106550 Krtap20-2E9Q0A8 60 aa3.44□□□□□ -1.86
Knop1-204ENSMUST00000106550 Sprr2bO70554 98 aa3.39□□□□□ -1.87
Knop1-204ENSMUST00000106550 ObscnA2AAJ9 8891 aaKnown RBP3.25□□□□□ -1.89
Knop1-204ENSMUST00000106550 Muc16A0A140LJ72 8478 aa3.22□□□□□ -1.89
Knop1-204ENSMUST00000106550 Eppk1Q8R0W0 6548 aa3.11□□□□□ -1.91
Knop1-204ENSMUST00000106550 Gm11555B1AQ89 175 aa3.1□□□□□ -1.91
Knop1-204ENSMUST00000106550 Krtap31-2Q8CAY5 177 aa3.06□□□□□ -1.92
Knop1-204ENSMUST00000106550 Macf1Q9QXZ0 7354 aaKnown RBP3.04□□□□□ -1.92
Knop1-204ENSMUST00000106550 Kmt2dQ6PDK2 5588 aa2.99□□□□□ -1.93
Knop1-204ENSMUST00000106550 1110025L11RikO09048 78 aa2.94□□□□□ -1.94
Knop1-204ENSMUST00000106550 Krtap6-5Q925H3 78 aa2.94□□□□□ -1.94
Knop1-204ENSMUST00000106550 DstQ91ZU6 7393 aaKnown RBP2.94□□□□□ -1.94
Knop1-204ENSMUST00000106550 NebE9Q1W3 7152 aa2.89□□□□□ -1.95
Knop1-204ENSMUST00000106550 Gm10229O08631 77 aa2.79□□□□□ -1.96
Knop1-204ENSMUST00000106550 Gm11568A2A4M2 211 aa2.77□□□□□ -1.97
Knop1-204ENSMUST00000106550 Krtap9-1Q64526 186 aa2.77□□□□□ -1.97
Knop1-204ENSMUST00000106550 Gm11559Q9D3H7 191 aa2.76□□□□□ -1.97
Knop1-204ENSMUST00000106550 Muc19Q6PZE0 7524 aa2.64□□□□□ -1.99
Knop1-204ENSMUST00000106550 Phgr1Q8K0G7 91 aa2.61□□□□□ -1.99
Knop1-204ENSMUST00000106550 Gm11639A0A1D5RLM8 5808 aa2.54□□□□□ -2
Knop1-204ENSMUST00000106550 Gpr98Q8VHN7 6298 aaKnown RBP2.49□□□□□ -2.01
Knop1-204ENSMUST00000106550 Krtap5-2Q9D5Z7 189 aa2.44□□□□□ -2.02
Knop1-204ENSMUST00000106550 Hmcn1D3YXG0 5634 aa2.33□□□□□ -2.04
Knop1-204ENSMUST00000106550 Gm4553A0A1B0GSA9 284 aa2.28□□□□□ -2.05
Knop1-204ENSMUST00000106550 Krtap6-2O08884 159 aa2.23□□□□□ -2.05
Knop1-204ENSMUST00000106550 Gm2431E9Q8S1 172 aa2.16□□□□□ -2.06
Knop1-204ENSMUST00000106550 AhnakE9Q616 5656 aaKnown RBP2.1□□□□□ -2.07
Knop1-204ENSMUST00000106550 Gm10153A0A1B0GRL1 320 aa2.09□□□□□ -2.08
Knop1-204ENSMUST00000106550 Krtap21-1Q925H4 128 aa2.09□□□□□ -2.08
Knop1-204ENSMUST00000106550 A030005L19RikA0A1Y7VIU2 113 aa2.07□□□□□ -2.08
Knop1-204ENSMUST00000106550 A0A1Y7VJH8 109 aa2.03□□□□□ -2.08
Knop1-204ENSMUST00000106550 Gm45337A0A1B0GS71 263 aa1.96□□□□□ -2.1
Knop1-204ENSMUST00000106550 Gm40460A0A1B0GR10 244 aa1.94□□□□□ -2.1
Knop1-204ENSMUST00000106550 Gm7579A0A1B0GRJ4 243 aa1.94□□□□□ -2.1
Knop1-204ENSMUST00000106550 Krtap5-5Q2TA51 241 aa1.94□□□□□ -2.1
Knop1-204ENSMUST00000106550 Krtap5-4Q62220 223 aa1.94□□□□□ -2.1
Knop1-204ENSMUST00000106550 Krtap28-10A0A1Y7VP58 119 aa1.92□□□□□ -2.1
Knop1-204ENSMUST00000106550 A0A1Y7VLE6 161 aa1.89□□□□□ -2.11
Knop1-204ENSMUST00000106550 Gm11567Q9D141 195 aa1.84□□□□□ -2.11
Knop1-204ENSMUST00000106550 Krtap28-13A0A087WQP5 138 aa1.81□□□□□ -2.12
Knop1-204ENSMUST00000106550 Gm7544A0A1Y7VJ58 118 aa1.8□□□□□ -2.12
Knop1-204ENSMUST00000106550 Gm39115A0A1B0GSH7 232 aa1.79□□□□□ -2.12
Knop1-204ENSMUST00000106550 A030005K14RikA0A1Y7VNY1 122 aa1.77□□□□□ -2.13
Knop1-204ENSMUST00000106550 A030003K21RikA0A1Y7VIM3 128 aa1.67□□□□□ -2.14
Knop1-204ENSMUST00000106550 A0A1Y7VJ07 166 aa1.59□□□□□ -2.15
Knop1-204ENSMUST00000106550 Gm6217A0A1Y7VJK9 128 aa1.57□□□□□ -2.16
Knop1-204ENSMUST00000106550 Gm45618A0A1B0GSA0 219 aa1.52□□□□□ -2.17
Knop1-204ENSMUST00000106550 A0A286YCP9 139 aa1.51□□□□□ -2.17
Knop1-204ENSMUST00000106550 Gm29735A0A1B0GT06 219 aa1.47□□□□□ -2.17
Knop1-204ENSMUST00000106550 A030014E15RikA0A1Y7VJV2 120 aa1.47□□□□□ -2.17
Knop1-204ENSMUST00000106550 Krtap5-1Q64507 230 aa1.18□□□□□ -2.22
Knop1-204ENSMUST00000106550 Gm4559A4IF42 199 aa0.76□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 90.9 ms