RNA–Protein interactions for RNA: ENSMUST00000105840.7

Usp48-205, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp48, Length 5,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-205ENSMUST00000105840 Gm11562A0PK51 136 aa6,17□□□□□ -1,42
Usp48-205ENSMUST00000105840 4932415D10RikA0A1W2P6U8 4986 aa6,16□□□□□ -1,42
Usp48-205ENSMUST00000105840 Krtap4-16Q91W93 202 aa6,12□□□□□ -1,43
Usp48-205ENSMUST00000105840 Fat4Q2PZL6 4981 aa6,06□□□□□ -1,44
Usp48-205ENSMUST00000105840 Krtap4-2B1AQ85 167 aa5,99□□□□□ -1,45
Usp48-205ENSMUST00000105840 ZanO88799 5376 aa5,99□□□□□ -1,45
Usp48-205ENSMUST00000105840 Krtap4-1Q3UUY3 169 aa5,91□□□□□ -1,46
Usp48-205ENSMUST00000105840 2300003K06RikA2A4M0 262 aa5,88□□□□□ -1,47
Usp48-205ENSMUST00000105840 Lce1kJ3QP15 125 aa5,85□□□□□ -1,47
Usp48-205ENSMUST00000105840 Rnf213E9Q555 5152 aaKnown RBP5,78□□□□□ -1,48
Usp48-205ENSMUST00000105840 Ush2AQ2QI47 5193 aa5,77□□□□□ -1,49
Usp48-205ENSMUST00000105840 Krtap4-7Q9D732 168 aa5,77□□□□□ -1,49
Usp48-205ENSMUST00000105840 Gm11564A2A4L9 201 aa5,76□□□□□ -1,49
Usp48-205ENSMUST00000105840 Gm11563B1AQ90 168 aa5,76□□□□□ -1,49
Usp48-205ENSMUST00000105840 Gm11595B1AQA7 289 aa5,76□□□□□ -1,49
Usp48-205ENSMUST00000105840 Krtap4-8B1AQA8 209 aa5,76□□□□□ -1,49
Usp48-205ENSMUST00000105840 Krtap4-9B1AQA9 244 aa5,75□□□□□ -1,49
Usp48-205ENSMUST00000105840 Muc5bE9Q5I3 4800 aa5,74□□□□□ -1,49
Usp48-205ENSMUST00000105840 Mt3P28184 68 aa5,73□□□□□ -1,49
Usp48-205ENSMUST00000105840 Lce1a1Q9CQH5 143 aa5,73□□□□□ -1,49
Usp48-205ENSMUST00000105840 Gm11596B1AQB0 205 aa5,69□□□□□ -1,5
Usp48-205ENSMUST00000105840 Krtap4-13Q9D7P3 165 aa5,63□□□□□ -1,51
Usp48-205ENSMUST00000105840 Fsip2A2ARZ3 6995 aa5,53□□□□□ -1,52
Usp48-205ENSMUST00000105840 Mt1P02802 61 aaKnown RBP5,44□□□□□ -1,54
Usp48-205ENSMUST00000105840 Syne2Q6ZWQ0 6874 aaKnown RBP5,41□□□□□ -1,54
Usp48-205ENSMUST00000105840 Muc16A0A140LJ72 8478 aa5,39□□□□□ -1,55
Usp48-205ENSMUST00000105840 SspoQ8CG65 4998 aa5,36□□□□□ -1,55
Usp48-205ENSMUST00000105840 ObscnA2AAJ9 8891 aaKnown RBP5,13□□□□□ -1,59
Usp48-205ENSMUST00000105840 Gm11554B1AQB2 190 aa5,06□□□□□ -1,6
Usp48-205ENSMUST00000105840 Sprr2bO70554 98 aa5,05□□□□□ -1,6
Usp48-205ENSMUST00000105840 Krtap20-2E9Q0A8 60 aa4,97□□□□□ -1,61
Usp48-205ENSMUST00000105840 Krtap6-3A0A087WQL6 57 aa4,96□□□□□ -1,62
Usp48-205ENSMUST00000105840 Krtap31-2Q8CAY5 177 aa4,84□□□□□ -1,63
Usp48-205ENSMUST00000105840 Macf1Q9QXZ0 7354 aaKnown RBP4,63□□□□□ -1,67
Usp48-205ENSMUST00000105840 Gm11555B1AQ89 175 aa4,55□□□□□ -1,68
Usp48-205ENSMUST00000105840 1110025L11RikO09048 78 aa4,48□□□□□ -1,69
Usp48-205ENSMUST00000105840 Krtap6-5Q925H3 78 aa4,48□□□□□ -1,69
Usp48-205ENSMUST00000105840 Kmt2dQ6PDK2 5588 aa4,44□□□□□ -1,7
Usp48-205ENSMUST00000105840 DstQ91ZU6 7393 aaKnown RBP4,36□□□□□ -1,71
Usp48-205ENSMUST00000105840 Eppk1Q8R0W0 6548 aa4,3□□□□□ -1,72
Usp48-205ENSMUST00000105840 NebE9Q1W3 7152 aa4,25□□□□□ -1,73
Usp48-205ENSMUST00000105840 Gm10229O08631 77 aa4,22□□□□□ -1,73
Usp48-205ENSMUST00000105840 Muc19Q6PZE0 7524 aa4,18□□□□□ -1,74
Usp48-205ENSMUST00000105840 Phgr1Q8K0G7 91 aa4,16□□□□□ -1,74
Usp48-205ENSMUST00000105840 Gm11568A2A4M2 211 aa4,03□□□□□ -1,76
Usp48-205ENSMUST00000105840 Krtap9-1Q64526 186 aa4,03□□□□□ -1,76
Usp48-205ENSMUST00000105840 Gm11559Q9D3H7 191 aa3,86□□□□□ -1,79
Usp48-205ENSMUST00000105840 Gpr98Q8VHN7 6298 aaKnown RBP3,64□□□□□ -1,83
Usp48-205ENSMUST00000105840 Gm11639A0A1D5RLM8 5808 aa3,61□□□□□ -1,83
Usp48-205ENSMUST00000105840 Krtap5-2Q9D5Z7 189 aa3,54□□□□□ -1,84
Usp48-205ENSMUST00000105840 A0A1Y7VLE6 161 aa3,51□□□□□ -1,85
Usp48-205ENSMUST00000105840 Hmcn1D3YXG0 5634 aa3,46□□□□□ -1,86
Usp48-205ENSMUST00000105840 Krtap6-2O08884 159 aa3,35□□□□□ -1,87
Usp48-205ENSMUST00000105840 Gm4553A0A1B0GSA9 284 aa3,33□□□□□ -1,88
Usp48-205ENSMUST00000105840 A0A1Y7VJH8 109 aa3,26□□□□□ -1,89
Usp48-205ENSMUST00000105840 Gm11567Q9D141 195 aa3,24□□□□□ -1,89
Usp48-205ENSMUST00000105840 A030003K21RikA0A1Y7VIM3 128 aa3,22□□□□□ -1,89
Usp48-205ENSMUST00000105840 Krtap21-1Q925H4 128 aa3,19□□□□□ -1,9
Usp48-205ENSMUST00000105840 Krtap28-10A0A1Y7VP58 119 aa3,16□□□□□ -1,9
Usp48-205ENSMUST00000105840 Gm2431E9Q8S1 172 aa3,16□□□□□ -1,9
Usp48-205ENSMUST00000105840 Krtap28-13A0A087WQP5 138 aa3,09□□□□□ -1,91
Usp48-205ENSMUST00000105840 AhnakE9Q616 5656 aaKnown RBP3,06□□□□□ -1,92
Usp48-205ENSMUST00000105840 A030005K14RikA0A1Y7VNY1 122 aa3,06□□□□□ -1,92
Usp48-205ENSMUST00000105840 Gm10153A0A1B0GRL1 320 aa3,05□□□□□ -1,92
Usp48-205ENSMUST00000105840 A030005L19RikA0A1Y7VIU2 113 aa3,03□□□□□ -1,92
Usp48-205ENSMUST00000105840 Gm6217A0A1Y7VJK9 128 aa3,03□□□□□ -1,92
Usp48-205ENSMUST00000105840 A0A1Y7VJ07 166 aa2,99□□□□□ -1,93
Usp48-205ENSMUST00000105840 Gm45337A0A1B0GS71 263 aa2,93□□□□□ -1,94
Usp48-205ENSMUST00000105840 Gm7544A0A1Y7VJ58 118 aa2,9□□□□□ -1,94
Usp48-205ENSMUST00000105840 Gm40460A0A1B0GR10 244 aa2,88□□□□□ -1,95
Usp48-205ENSMUST00000105840 Gm7579A0A1B0GRJ4 243 aa2,88□□□□□ -1,95
Usp48-205ENSMUST00000105840 Krtap5-5Q2TA51 241 aa2,88□□□□□ -1,95
Usp48-205ENSMUST00000105840 Krtap5-4Q62220 223 aa2,88□□□□□ -1,95
Usp48-205ENSMUST00000105840 A030014E15RikA0A1Y7VJV2 120 aa2,73□□□□□ -1,97
Usp48-205ENSMUST00000105840 Gm39115A0A1B0GSH7 232 aa2,68□□□□□ -1,98
Usp48-205ENSMUST00000105840 Gm45618A0A1B0GSA0 219 aa2,28□□□□□ -2,04
Usp48-205ENSMUST00000105840 A0A286YCP9 139 aa2,26□□□□□ -2,05
Usp48-205ENSMUST00000105840 Gm29735A0A1B0GT06 219 aa2,16□□□□□ -2,06
Usp48-205ENSMUST00000105840 Krtap5-1Q64507 230 aa1,71□□□□□ -2,14
Usp48-205ENSMUST00000105840 Gm4559A4IF42 199 aa1,1□□□□□ -2,23
Retrieved 80 of 22,080 RNA–protein pairs in 53,4 ms