RNA–Protein interactions for RNA: ENSMUST00000101164.10

Limch1-202, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Limch1, Length 5,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-202ENSMUST00000101164 Krtap4-8B1AQA8 209 aa3.25□□□□□ -1.89
Limch1-202ENSMUST00000101164 Muc5bE9Q5I3 4800 aa3.24□□□□□ -1.89
Limch1-202ENSMUST00000101164 Krtap4-9B1AQA9 244 aa3.23□□□□□ -1.89
Limch1-202ENSMUST00000101164 Krtap19-4Q925H7 84 aa3.21□□□□□ -1.9
Limch1-202ENSMUST00000101164 A0A1Y7VLE6 161 aa3.2□□□□□ -1.9
Limch1-202ENSMUST00000101164 Gm10024A0A0A0MQA4 119 aa3.19□□□□□ -1.9
Limch1-202ENSMUST00000101164 Gm11562A0PK51 136 aa3.19□□□□□ -1.9
Limch1-202ENSMUST00000101164 Sprr2eO70556 76 aa3.19□□□□□ -1.9
Limch1-202ENSMUST00000101164 Lce1eQ9D139 143 aa3.19□□□□□ -1.9
Limch1-202ENSMUST00000101164 Syne1Q6ZWR6 8799 aa3.15□□□□□ -1.9
Limch1-202ENSMUST00000101164 Fsip2A2ARZ3 6995 aa3.15□□□□□ -1.91
Limch1-202ENSMUST00000101164 2300003K06RikA2A4M0 262 aa3.14□□□□□ -1.91
Limch1-202ENSMUST00000101164 Krtap4-7Q9D732 168 aa3.13□□□□□ -1.91
Limch1-202ENSMUST00000101164 Krtap4-13Q9D7P3 165 aa3.13□□□□□ -1.91
Limch1-202ENSMUST00000101164 Syne2Q6ZWQ0 6874 aaKnown RBP3.12□□□□□ -1.91
Limch1-202ENSMUST00000101164 Krtap17-1A2A5X6 109 aa3.11□□□□□ -1.91
Limch1-202ENSMUST00000101164 Krtap31-2Q8CAY5 177 aa3.1□□□□□ -1.91
Limch1-202ENSMUST00000101164 Lce1a2Q9D1K4 149 aa3.07□□□□□ -1.92
Limch1-202ENSMUST00000101164 Sprr2hO70559 108 aa3.05□□□□□ -1.92
Limch1-202ENSMUST00000101164 SspoQ8CG65 4998 aa3.01□□□□□ -1.93
Limch1-202ENSMUST00000101164 Krtap6-3A0A087WQL6 57 aa3□□□□□ -1.93
Limch1-202ENSMUST00000101164 Sprr2dO70555 85 aa2.97□□□□□ -1.93
Limch1-202ENSMUST00000101164 Hmcn2A2AJ76 5100 aa2.96□□□□□ -1.93
Limch1-202ENSMUST00000101164 Gm11938Q9D3H4 131 aa2.96□□□□□ -1.94
Limch1-202ENSMUST00000101164 Lce1a1Q9CQH5 143 aa2.94□□□□□ -1.94
Limch1-202ENSMUST00000101164 Lce1kJ3QP15 125 aa2.93□□□□□ -1.94
Limch1-202ENSMUST00000101164 Macf1Q9QXZ0 7354 aaKnown RBP2.87□□□□□ -1.95
Limch1-202ENSMUST00000101164 Eppk1Q8R0W0 6548 aa2.86□□□□□ -1.95
Limch1-202ENSMUST00000101164 Krtap4-16Q91W93 202 aa2.85□□□□□ -1.95
Limch1-202ENSMUST00000101164 A0A1Y7VJ07 166 aa2.83□□□□□ -1.96
Limch1-202ENSMUST00000101164 Muc16A0A140LJ72 8478 aa2.82□□□□□ -1.96
Limch1-202ENSMUST00000101164 Gm11554B1AQB2 190 aa2.78□□□□□ -1.96
Limch1-202ENSMUST00000101164 Mt3P28184 68 aa2.78□□□□□ -1.96
Limch1-202ENSMUST00000101164 DstQ91ZU6 7393 aaKnown RBP2.75□□□□□ -1.97
Limch1-202ENSMUST00000101164 ObscnA2AAJ9 8891 aaKnown RBP2.72□□□□□ -1.97
Limch1-202ENSMUST00000101164 Gm11555B1AQ89 175 aa2.71□□□□□ -1.98
Limch1-202ENSMUST00000101164 Krtap20-2E9Q0A8 60 aa2.7□□□□□ -1.98
Limch1-202ENSMUST00000101164 NebE9Q1W3 7152 aa2.62□□□□□ -1.99
Limch1-202ENSMUST00000101164 Kmt2dQ6PDK2 5588 aa2.56□□□□□ -2
Limch1-202ENSMUST00000101164 Mt1P02802 61 aaKnown RBP2.52□□□□□ -2.01
Limch1-202ENSMUST00000101164 A030005K14RikA0A1Y7VNY1 122 aa2.45□□□□□ -2.02
Limch1-202ENSMUST00000101164 Sprr2bO70554 98 aa2.45□□□□□ -2.02
Limch1-202ENSMUST00000101164 Gpr98Q8VHN7 6298 aaKnown RBP2.44□□□□□ -2.02
Limch1-202ENSMUST00000101164 Krtap28-13A0A087WQP5 138 aa2.4□□□□□ -2.03
Limch1-202ENSMUST00000101164 A0A1Y7VJH8 109 aa2.39□□□□□ -2.03
Limch1-202ENSMUST00000101164 A030003K21RikA0A1Y7VIM3 128 aa2.36□□□□□ -2.03
Limch1-202ENSMUST00000101164 Krtap28-10A0A1Y7VP58 119 aa2.34□□□□□ -2.04
Limch1-202ENSMUST00000101164 Muc19Q6PZE0 7524 aa2.32□□□□□ -2.04
Limch1-202ENSMUST00000101164 A030014E15RikA0A1Y7VJV2 120 aa2.31□□□□□ -2.04
Limch1-202ENSMUST00000101164 Gm11639A0A1D5RLM8 5808 aa2.31□□□□□ -2.04
Limch1-202ENSMUST00000101164 Gm7544A0A1Y7VJ58 118 aa2.28□□□□□ -2.05
Limch1-202ENSMUST00000101164 Gm11559Q9D3H7 191 aa2.27□□□□□ -2.05
Limch1-202ENSMUST00000101164 Gm6217A0A1Y7VJK9 128 aa2.25□□□□□ -2.05
Limch1-202ENSMUST00000101164 A030005L19RikA0A1Y7VIU2 113 aa2.18□□□□□ -2.06
Limch1-202ENSMUST00000101164 Gm11568A2A4M2 211 aa2.13□□□□□ -2.07
Limch1-202ENSMUST00000101164 Krtap9-1Q64526 186 aa2.13□□□□□ -2.07
Limch1-202ENSMUST00000101164 Hmcn1D3YXG0 5634 aa2.11□□□□□ -2.07
Limch1-202ENSMUST00000101164 1110025L11RikO09048 78 aa2.06□□□□□ -2.08
Limch1-202ENSMUST00000101164 Krtap6-5Q925H3 78 aa2.06□□□□□ -2.08
Limch1-202ENSMUST00000101164 Krtap5-2Q9D5Z7 189 aa2.03□□□□□ -2.08
Limch1-202ENSMUST00000101164 A0A286YCP9 139 aa1.98□□□□□ -2.09
Limch1-202ENSMUST00000101164 Gm4553A0A1B0GSA9 284 aa1.96□□□□□ -2.1
Limch1-202ENSMUST00000101164 Gm10229O08631 77 aa1.94□□□□□ -2.1
Limch1-202ENSMUST00000101164 Phgr1Q8K0G7 91 aa1.91□□□□□ -2.1
Limch1-202ENSMUST00000101164 Gm11567Q9D141 195 aa1.88□□□□□ -2.11
Limch1-202ENSMUST00000101164 AhnakE9Q616 5656 aaKnown RBP1.85□□□□□ -2.11
Limch1-202ENSMUST00000101164 Gm2431E9Q8S1 172 aa1.82□□□□□ -2.12
Limch1-202ENSMUST00000101164 Gm45337A0A1B0GS71 263 aa1.69□□□□□ -2.14
Limch1-202ENSMUST00000101164 Gm10153A0A1B0GRL1 320 aa1.67□□□□□ -2.14
Limch1-202ENSMUST00000101164 Gm40460A0A1B0GR10 244 aa1.67□□□□□ -2.14
Limch1-202ENSMUST00000101164 Gm7579A0A1B0GRJ4 243 aa1.67□□□□□ -2.14
Limch1-202ENSMUST00000101164 Krtap5-5Q2TA51 241 aa1.67□□□□□ -2.14
Limch1-202ENSMUST00000101164 Krtap5-4Q62220 223 aa1.67□□□□□ -2.14
Limch1-202ENSMUST00000101164 Krtap6-2O08884 159 aa1.62□□□□□ -2.15
Limch1-202ENSMUST00000101164 Gm39115A0A1B0GSH7 232 aa1.6□□□□□ -2.15
Limch1-202ENSMUST00000101164 Krtap21-1Q925H4 128 aa1.46□□□□□ -2.18
Limch1-202ENSMUST00000101164 Gm45618A0A1B0GSA0 219 aa1.44□□□□□ -2.18
Limch1-202ENSMUST00000101164 Gm29735A0A1B0GT06 219 aa1.23□□□□□ -2.21
Limch1-202ENSMUST00000101164 Krtap5-1Q64507 230 aa1.04□□□□□ -2.24
Limch1-202ENSMUST00000101164 Gm4559A4IF42 199 aa0.93□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 90.5 ms