RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Krtap4-1Q3UUY3 169 aa5,58□□□□□ -1,52
Sdc3-201ENSMUST00000070478 Krtap17-1A2A5X6 109 aa5,56□□□□□ -1,52
Sdc3-201ENSMUST00000070478 Hmcn2A2AJ76 5100 aa5,55□□□□□ -1,52
Sdc3-201ENSMUST00000070478 Muc5bE9Q5I3 4800 aa5,5□□□□□ -1,53
Sdc3-201ENSMUST00000070478 Gm11596B1AQB0 205 aa5,5□□□□□ -1,53
Sdc3-201ENSMUST00000070478 Gm11564A2A4L9 201 aa5,46□□□□□ -1,54
Sdc3-201ENSMUST00000070478 Gm11563B1AQ90 168 aa5,46□□□□□ -1,54
Sdc3-201ENSMUST00000070478 Gm11595B1AQA7 289 aa5,46□□□□□ -1,54
Sdc3-201ENSMUST00000070478 Krtap4-8B1AQA8 209 aa5,46□□□□□ -1,54
Sdc3-201ENSMUST00000070478 Krtap4-9B1AQA9 244 aa5,44□□□□□ -1,54
Sdc3-201ENSMUST00000070478 2300003K06RikA2A4M0 262 aa5,4□□□□□ -1,54
Sdc3-201ENSMUST00000070478 Krtap4-7Q9D732 168 aa5,34□□□□□ -1,55
Sdc3-201ENSMUST00000070478 Fsip2A2ARZ3 6995 aa5,33□□□□□ -1,56
Sdc3-201ENSMUST00000070478 Krtap4-13Q9D7P3 165 aa5,29□□□□□ -1,56
Sdc3-201ENSMUST00000070478 Gm11562A0PK51 136 aa5,26□□□□□ -1,57
Sdc3-201ENSMUST00000070478 Sprr2dO70555 85 aa5,25□□□□□ -1,57
Sdc3-201ENSMUST00000070478 Lce1kJ3QP15 125 aa5,21□□□□□ -1,58
Sdc3-201ENSMUST00000070478 Gm11938Q9D3H4 131 aa5,17□□□□□ -1,58
Sdc3-201ENSMUST00000070478 Sprr2hO70559 108 aa5,14□□□□□ -1,59
Sdc3-201ENSMUST00000070478 Syne2Q6ZWQ0 6874 aaKnown RBP5,12□□□□□ -1,59
Sdc3-201ENSMUST00000070478 SspoQ8CG65 4998 aa5,11□□□□□ -1,59
Sdc3-201ENSMUST00000070478 Krtap31-1Q9D644 177 aa5,07□□□□□ -1,6
Sdc3-201ENSMUST00000070478 Muc16A0A140LJ72 8478 aa5,06□□□□□ -1,6
Sdc3-201ENSMUST00000070478 Mt3P28184 68 aa4,97□□□□□ -1,61
Sdc3-201ENSMUST00000070478 Lce1a1Q9CQH5 143 aa4,88□□□□□ -1,63
Sdc3-201ENSMUST00000070478 Krtap6-3A0A087WQL6 57 aa4,86□□□□□ -1,63
Sdc3-201ENSMUST00000070478 Gm11554B1AQB2 190 aa4,72□□□□□ -1,65
Sdc3-201ENSMUST00000070478 Krtap4-16Q91W93 202 aa4,66□□□□□ -1,66
Sdc3-201ENSMUST00000070478 ObscnA2AAJ9 8891 aaKnown RBP4,66□□□□□ -1,66
Sdc3-201ENSMUST00000070478 Macf1Q9QXZ0 7354 aaKnown RBP4,65□□□□□ -1,66
Sdc3-201ENSMUST00000070478 Krtap20-2E9Q0A8 60 aa4,63□□□□□ -1,67
Sdc3-201ENSMUST00000070478 Mt1P02802 61 aaKnown RBP4,62□□□□□ -1,67
Sdc3-201ENSMUST00000070478 DstQ91ZU6 7393 aaKnown RBP4,37□□□□□ -1,71
Sdc3-201ENSMUST00000070478 Gm11555B1AQ89 175 aa4,37□□□□□ -1,71
Sdc3-201ENSMUST00000070478 Eppk1Q8R0W0 6548 aa4,32□□□□□ -1,72
Sdc3-201ENSMUST00000070478 Kmt2dQ6PDK2 5588 aa4,31□□□□□ -1,72
Sdc3-201ENSMUST00000070478 Sprr2bO70554 98 aa4,31□□□□□ -1,72
Sdc3-201ENSMUST00000070478 NebE9Q1W3 7152 aa4,27□□□□□ -1,73
Sdc3-201ENSMUST00000070478 Muc19Q6PZE0 7524 aa4,03□□□□□ -1,76
Sdc3-201ENSMUST00000070478 Krtap31-2Q8CAY5 177 aa3,87□□□□□ -1,79
Sdc3-201ENSMUST00000070478 1110025L11RikO09048 78 aa3,81□□□□□ -1,8
Sdc3-201ENSMUST00000070478 Krtap6-5Q925H3 78 aa3,81□□□□□ -1,8
Sdc3-201ENSMUST00000070478 Gm11559Q9D3H7 191 aa3,75□□□□□ -1,81
Sdc3-201ENSMUST00000070478 Gm11568A2A4M2 211 aa3,74□□□□□ -1,81
Sdc3-201ENSMUST00000070478 Krtap9-1Q64526 186 aa3,74□□□□□ -1,81
Sdc3-201ENSMUST00000070478 Gpr98Q8VHN7 6298 aaKnown RBP3,69□□□□□ -1,82
Sdc3-201ENSMUST00000070478 Gm11639A0A1D5RLM8 5808 aa3,68□□□□□ -1,82
Sdc3-201ENSMUST00000070478 Gm10229O08631 77 aa3,58□□□□□ -1,84
Sdc3-201ENSMUST00000070478 Hmcn1D3YXG0 5634 aa3,44□□□□□ -1,86
Sdc3-201ENSMUST00000070478 Krtap5-2Q9D5Z7 189 aa3,4□□□□□ -1,86
Sdc3-201ENSMUST00000070478 Phgr1Q8K0G7 91 aa3,26□□□□□ -1,89
Sdc3-201ENSMUST00000070478 Gm4553A0A1B0GSA9 284 aa3,21□□□□□ -1,9
Sdc3-201ENSMUST00000070478 AhnakE9Q616 5656 aaKnown RBP3,03□□□□□ -1,92
Sdc3-201ENSMUST00000070478 Gm2431E9Q8S1 172 aa3,02□□□□□ -1,93
Sdc3-201ENSMUST00000070478 Gm10153A0A1B0GRL1 320 aa3,01□□□□□ -1,93
Sdc3-201ENSMUST00000070478 A030005L19RikA0A1Y7VIU2 113 aa2,92□□□□□ -1,94
Sdc3-201ENSMUST00000070478 Krtap6-2O08884 159 aa2,92□□□□□ -1,94
Sdc3-201ENSMUST00000070478 Gm45337A0A1B0GS71 263 aa2,85□□□□□ -1,95
Sdc3-201ENSMUST00000070478 A0A1Y7VJH8 109 aa2,81□□□□□ -1,96
Sdc3-201ENSMUST00000070478 Gm40460A0A1B0GR10 244 aa2,8□□□□□ -1,96
Sdc3-201ENSMUST00000070478 Gm7579A0A1B0GRJ4 243 aa2,8□□□□□ -1,96
Sdc3-201ENSMUST00000070478 Krtap5-5Q2TA51 241 aa2,8□□□□□ -1,96
Sdc3-201ENSMUST00000070478 Krtap5-4Q62220 223 aa2,8□□□□□ -1,96
Sdc3-201ENSMUST00000070478 Krtap21-1Q925H4 128 aa2,73□□□□□ -1,97
Sdc3-201ENSMUST00000070478 Gm39115A0A1B0GSH7 232 aa2,57□□□□□ -2
Sdc3-201ENSMUST00000070478 Gm11567Q9D141 195 aa2,42□□□□□ -2,02
Sdc3-201ENSMUST00000070478 A0A1Y7VLE6 161 aa2,34□□□□□ -2,03
Sdc3-201ENSMUST00000070478 Gm45618A0A1B0GSA0 219 aa2,17□□□□□ -2,06
Sdc3-201ENSMUST00000070478 Gm29735A0A1B0GT06 219 aa2,11□□□□□ -2,07
Sdc3-201ENSMUST00000070478 Krtap5-1Q64507 230 aa1,64□□□□□ -2,15
Sdc3-201ENSMUST00000070478 A0A1Y7VJ07 166 aa1,45□□□□□ -2,18
Sdc3-201ENSMUST00000070478 A030003K21RikA0A1Y7VIM3 128 aa1,4□□□□□ -2,19
Sdc3-201ENSMUST00000070478 Gm6217A0A1Y7VJK9 128 aa1,33□□□□□ -2,2
Sdc3-201ENSMUST00000070478 A0A286YCP9 139 aa1,24□□□□□ -2,21
Sdc3-201ENSMUST00000070478 Krtap28-10A0A1Y7VP58 119 aa1,21□□□□□ -2,21
Sdc3-201ENSMUST00000070478 A030005K14RikA0A1Y7VNY1 122 aa1,19□□□□□ -2,22
Sdc3-201ENSMUST00000070478 Krtap28-13A0A087WQP5 138 aa1,15□□□□□ -2,23
Sdc3-201ENSMUST00000070478 Gm7544A0A1Y7VJ58 118 aa1,13□□□□□ -2,23
Sdc3-201ENSMUST00000070478 Gm4559A4IF42 199 aa1,1□□□□□ -2,23
Sdc3-201ENSMUST00000070478 A030014E15RikA0A1Y7VJV2 120 aa1,04□□□□□ -2,24
Retrieved 80 of 22,080 RNA–protein pairs in 57,7 ms