RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Krtap19-9bQ99NG9 58 aa7.32□□□□□ -1.24
Vti1b-201ENSMUST00000055262 Gm12216A0A1W2P827 62 aa7.3□□□□□ -1.24
Vti1b-201ENSMUST00000055262 2300003K06RikA2A4M0 262 aa7.23□□□□□ -1.25
Vti1b-201ENSMUST00000055262 Romo1P60603 79 aa7.19□□□□□ -1.26
Vti1b-201ENSMUST00000055262 Sprr2gO70558 76 aa6.86□□□□□ -1.31
Vti1b-201ENSMUST00000055262 Lce1kJ3QP15 125 aa6.83□□□□□ -1.32
Vti1b-201ENSMUST00000055262 Lce1eQ9D139 143 aa6.76□□□□□ -1.33
Vti1b-201ENSMUST00000055262 Krtap7-1Q9D3I6 87 aa6.73□□□□□ -1.33
Vti1b-201ENSMUST00000055262 Krtap20-2E9Q0A8 60 aa6.72□□□□□ -1.33
Vti1b-201ENSMUST00000055262 Lce1cQ9D1C5 147 aa6.71□□□□□ -1.34
Vti1b-201ENSMUST00000055262 Gm45618A0A1B0GSA0 219 aa6.68□□□□□ -1.34
Vti1b-201ENSMUST00000055262 Gm11559Q9D3H7 191 aa6.65□□□□□ -1.35
Vti1b-201ENSMUST00000055262 Lce1fB9EJP6 147 aa6.63□□□□□ -1.35
Vti1b-201ENSMUST00000055262 Gm11554B1AQB2 190 aa6.6□□□□□ -1.35
Vti1b-201ENSMUST00000055262 Gm2431E9Q8S1 172 aa6.6□□□□□ -1.35
Vti1b-201ENSMUST00000055262 2310046K23RikA0A0A6YVW6 87 aa6.59□□□□□ -1.36
Vti1b-201ENSMUST00000055262 Gm40193A0A1B0GT39 78 aa6.58□□□□□ -1.36
Vti1b-201ENSMUST00000055262 Tnp1P10856 55 aa6.56□□□□□ -1.36
Vti1b-201ENSMUST00000055262 Gm39115A0A1B0GSH7 232 aa6.54□□□□□ -1.36
Vti1b-201ENSMUST00000055262 SvipQ3UZP4 77 aa6.53□□□□□ -1.36
Vti1b-201ENSMUST00000055262 Gm11567Q9D141 195 aa6.53□□□□□ -1.36
Vti1b-201ENSMUST00000055262 Sprr2iO70560 76 aa6.46□□□□□ -1.38
Vti1b-201ENSMUST00000055262 Gm10100J3QK64 120 aa6.44□□□□□ -1.38
Vti1b-201ENSMUST00000055262 Krtap5-2Q9D5Z7 189 aa6.42□□□□□ -1.38
Vti1b-201ENSMUST00000055262 Gm10272F7CZ33 110 aa6.41□□□□□ -1.38
Vti1b-201ENSMUST00000055262 Lce3bQ9CQM7 98 aa6.38□□□□□ -1.39
Vti1b-201ENSMUST00000055262 Gm29735A0A1B0GT06 219 aa6.35□□□□□ -1.39
Vti1b-201ENSMUST00000055262 Krtap31-1Q9D644 177 aa6.35□□□□□ -1.39
Vti1b-201ENSMUST00000055262 Syne1Q6ZWR6 8799 aa6.25□□□□□ -1.41
Vti1b-201ENSMUST00000055262 Gm11568A2A4M2 211 aa6.22□□□□□ -1.41
Vti1b-201ENSMUST00000055262 Krtap9-1Q64526 186 aa6.22□□□□□ -1.41
Vti1b-201ENSMUST00000055262 Gm4553A0A1B0GSA9 284 aa6.11□□□□□ -1.43
Vti1b-201ENSMUST00000055262 Eppk1Q8R0W0 6548 aa6.11□□□□□ -1.43
Vti1b-201ENSMUST00000055262 Gm11938Q9D3H4 131 aa6.08□□□□□ -1.44
Vti1b-201ENSMUST00000055262 Mp68P56379 58 aa6.06□□□□□ -1.44
Vti1b-201ENSMUST00000055262 Macf1Q9QXZ0 7354 aaKnown RBP5.95□□□□□ -1.46
Vti1b-201ENSMUST00000055262 Kmt2dQ6PDK2 5588 aa5.91□□□□□ -1.46
Vti1b-201ENSMUST00000055262 Gm45337A0A1B0GS71 263 aa5.87□□□□□ -1.47
Vti1b-201ENSMUST00000055262 Mt1P02802 61 aaKnown RBP5.85□□□□□ -1.47
Vti1b-201ENSMUST00000055262 Krtap19-4Q925H7 84 aa5.78□□□□□ -1.48
Vti1b-201ENSMUST00000055262 Gm10153A0A1B0GRL1 320 aa5.77□□□□□ -1.49
Vti1b-201ENSMUST00000055262 Lce3cQ91V05 98 aa5.75□□□□□ -1.49
Vti1b-201ENSMUST00000055262 Gm40460A0A1B0GR10 244 aa5.67□□□□□ -1.5
Vti1b-201ENSMUST00000055262 Gm7579A0A1B0GRJ4 243 aa5.67□□□□□ -1.5
Vti1b-201ENSMUST00000055262 Krtap5-5Q2TA51 241 aa5.67□□□□□ -1.5
Vti1b-201ENSMUST00000055262 Krtap5-4Q62220 223 aa5.67□□□□□ -1.5
Vti1b-201ENSMUST00000055262 Lce3dE9Q8V1 98 aa5.66□□□□□ -1.5
Vti1b-201ENSMUST00000055262 Sprr2dO70555 85 aa5.66□□□□□ -1.5
Vti1b-201ENSMUST00000055262 Gm11639A0A1D5RLM8 5808 aa5.65□□□□□ -1.5
Vti1b-201ENSMUST00000055262 Hmcn1D3YXG0 5634 aa5.6□□□□□ -1.51
Vti1b-201ENSMUST00000055262 Lce3eF8VQJ0 98 aa5.55□□□□□ -1.52
Vti1b-201ENSMUST00000055262 Lce3fQ6PAI4 98 aa5.55□□□□□ -1.52
Vti1b-201ENSMUST00000055262 Gm20538F6Z9R1 75 aa5.54□□□□□ -1.52
Vti1b-201ENSMUST00000055262 Muc19Q6PZE0 7524 aa5.53□□□□□ -1.52
Vti1b-201ENSMUST00000055262 ObscnA2AAJ9 8891 aaKnown RBP5.45□□□□□ -1.54
Vti1b-201ENSMUST00000055262 Mt3P28184 68 aa5.4□□□□□ -1.54
Vti1b-201ENSMUST00000055262 4933428G20RikQ9D3X4 101 aa5.39□□□□□ -1.55
Vti1b-201ENSMUST00000055262 Gpr98Q8VHN7 6298 aaKnown RBP5.35□□□□□ -1.55
Vti1b-201ENSMUST00000055262 DstQ91ZU6 7393 aaKnown RBP5.32□□□□□ -1.56
Vti1b-201ENSMUST00000055262 Lce3aQ497I5 98 aa5.31□□□□□ -1.56
Vti1b-201ENSMUST00000055262 Sprr2fO70557 76 aa5.2□□□□□ -1.58
Vti1b-201ENSMUST00000055262 Krtap4-16Q91W93 202 aa5.19□□□□□ -1.58
Vti1b-201ENSMUST00000055262 Gm10142J3KMP7 120 aa5.18□□□□□ -1.58
Vti1b-201ENSMUST00000055262 NebE9Q1W3 7152 aa5.1□□□□□ -1.59
Vti1b-201ENSMUST00000055262 AhnakE9Q616 5656 aaKnown RBP4.98□□□□□ -1.61
Vti1b-201ENSMUST00000055262 Sprr2hO70559 108 aa4.87□□□□□ -1.63
Vti1b-201ENSMUST00000055262 Sprr2eO70556 76 aa4.81□□□□□ -1.64
Vti1b-201ENSMUST00000055262 Ndufaf8A2AMZ4 74 aa4.8□□□□□ -1.64
Vti1b-201ENSMUST00000055262 Gm10024A0A0A0MQA4 119 aa4.63□□□□□ -1.67
Vti1b-201ENSMUST00000055262 Krtap5-1Q64507 230 aa4.38□□□□□ -1.71
Vti1b-201ENSMUST00000055262 1110025L11RikO09048 78 aa4.26□□□□□ -1.73
Vti1b-201ENSMUST00000055262 Krtap6-5Q925H3 78 aa4.26□□□□□ -1.73
Vti1b-201ENSMUST00000055262 Gm4559A4IF42 199 aa4.19□□□□□ -1.74
Vti1b-201ENSMUST00000055262 Muc16A0A140LJ72 8478 aa4.11□□□□□ -1.75
Vti1b-201ENSMUST00000055262 Gm9112A2AI92 75 aa3.87□□□□□ -1.79
Vti1b-201ENSMUST00000055262 Gm10229O08631 77 aa3.81□□□□□ -1.8
Vti1b-201ENSMUST00000055262 Sprr2bO70554 98 aa3.49□□□□□ -1.85
Vti1b-201ENSMUST00000055262 Krtap21-1Q925H4 128 aa3.45□□□□□ -1.86
Vti1b-201ENSMUST00000055262 Krtap6-2O08884 159 aa3.35□□□□□ -1.87
Vti1b-201ENSMUST00000055262 Phgr1Q8K0G7 91 aa2.92□□□□□ -1.94
Retrieved 80 of 22,080 RNA–protein pairs in 104.8 ms