RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Sprr2iO70560 76 aa4.06□□□□□ -1.76
Sdf4-201ENSMUST00000050078 Lce1cQ9D1C5 147 aa4.06□□□□□ -1.76
Sdf4-201ENSMUST00000050078 Lce1lQ9D1G7 135 aa4.06□□□□□ -1.76
Sdf4-201ENSMUST00000050078 Lce1dQ9D731 133 aa4.06□□□□□ -1.76
Sdf4-201ENSMUST00000050078 Lce1bQ9D149 137 aa4.06□□□□□ -1.76
Sdf4-201ENSMUST00000050078 Hmcn2A2AJ76 5100 aa4.05□□□□□ -1.76
Sdf4-201ENSMUST00000050078 Lce1eQ9D139 143 aa4□□□□□ -1.77
Sdf4-201ENSMUST00000050078 Krtap19-4Q925H7 84 aa3.98□□□□□ -1.77
Sdf4-201ENSMUST00000050078 Mt4P47945 62 aa3.93□□□□□ -1.78
Sdf4-201ENSMUST00000050078 Krtap4-6Q3V4B7 195 aa3.92□□□□□ -1.78
Sdf4-201ENSMUST00000050078 Gm10024A0A0A0MQA4 119 aa3.91□□□□□ -1.78
Sdf4-201ENSMUST00000050078 Fsip2A2ARZ3 6995 aa3.89□□□□□ -1.79
Sdf4-201ENSMUST00000050078 Sprr2eO70556 76 aa3.85□□□□□ -1.79
Sdf4-201ENSMUST00000050078 Krtap4-1Q3UUY3 169 aa3.85□□□□□ -1.79
Sdf4-201ENSMUST00000050078 Krtap4-2B1AQ85 167 aa3.8□□□□□ -1.8
Sdf4-201ENSMUST00000050078 Gm11938Q9D3H4 131 aa3.8□□□□□ -1.8
Sdf4-201ENSMUST00000050078 Sprr2dO70555 85 aa3.77□□□□□ -1.81
Sdf4-201ENSMUST00000050078 Muc5bE9Q5I3 4800 aa3.75□□□□□ -1.81
Sdf4-201ENSMUST00000050078 Krtap31-1Q9D644 177 aa3.69□□□□□ -1.82
Sdf4-201ENSMUST00000050078 Krtap31-2Q8CAY5 177 aa3.68□□□□□ -1.82
Sdf4-201ENSMUST00000050078 Krtap4-9B1AQA9 244 aa3.66□□□□□ -1.82
Sdf4-201ENSMUST00000050078 Sprr2fO70557 76 aa3.65□□□□□ -1.82
Sdf4-201ENSMUST00000050078 Syne2Q6ZWQ0 6874 aaKnown RBP3.65□□□□□ -1.83
Sdf4-201ENSMUST00000050078 Gm11562A0PK51 136 aa3.65□□□□□ -1.83
Sdf4-201ENSMUST00000050078 ObscnA2AAJ9 8891 aaKnown RBP3.64□□□□□ -1.83
Sdf4-201ENSMUST00000050078 Gm11564A2A4L9 201 aa3.64□□□□□ -1.83
Sdf4-201ENSMUST00000050078 Gm11563B1AQ90 168 aa3.64□□□□□ -1.83
Sdf4-201ENSMUST00000050078 Gm11595B1AQA7 289 aa3.64□□□□□ -1.83
Sdf4-201ENSMUST00000050078 Krtap4-8B1AQA8 209 aa3.64□□□□□ -1.83
Sdf4-201ENSMUST00000050078 2300003K06RikA2A4M0 262 aa3.63□□□□□ -1.83
Sdf4-201ENSMUST00000050078 Sprr2hO70559 108 aa3.63□□□□□ -1.83
Sdf4-201ENSMUST00000050078 Gm11596B1AQB0 205 aa3.61□□□□□ -1.83
Sdf4-201ENSMUST00000050078 SspoQ8CG65 4998 aa3.6□□□□□ -1.83
Sdf4-201ENSMUST00000050078 Lce1kJ3QP15 125 aa3.58□□□□□ -1.84
Sdf4-201ENSMUST00000050078 Macf1Q9QXZ0 7354 aaKnown RBP3.57□□□□□ -1.84
Sdf4-201ENSMUST00000050078 Krtap4-13Q9D7P3 165 aa3.57□□□□□ -1.84
Sdf4-201ENSMUST00000050078 Gm11555B1AQ89 175 aa3.57□□□□□ -1.84
Sdf4-201ENSMUST00000050078 Krtap4-7Q9D732 168 aa3.57□□□□□ -1.84
Sdf4-201ENSMUST00000050078 Krtap4-16Q91W93 202 aa3.52□□□□□ -1.85
Sdf4-201ENSMUST00000050078 Lce1a1Q9CQH5 143 aa3.46□□□□□ -1.86
Sdf4-201ENSMUST00000050078 A0A286YCP9 139 aa3.37□□□□□ -1.87
Sdf4-201ENSMUST00000050078 Mt3P28184 68 aa3.31□□□□□ -1.88
Sdf4-201ENSMUST00000050078 Muc19Q6PZE0 7524 aa3.21□□□□□ -1.89
Sdf4-201ENSMUST00000050078 DstQ91ZU6 7393 aaKnown RBP3.21□□□□□ -1.9
Sdf4-201ENSMUST00000050078 Mt1P02802 61 aaKnown RBP3.19□□□□□ -1.9
Sdf4-201ENSMUST00000050078 Gm11554B1AQB2 190 aa3.17□□□□□ -1.9
Sdf4-201ENSMUST00000050078 Krtap20-2E9Q0A8 60 aa3.16□□□□□ -1.9
Sdf4-201ENSMUST00000050078 NebE9Q1W3 7152 aa3.09□□□□□ -1.91
Sdf4-201ENSMUST00000050078 Krtap6-3A0A087WQL6 57 aa3.07□□□□□ -1.92
Sdf4-201ENSMUST00000050078 Kmt2dQ6PDK2 5588 aa3.01□□□□□ -1.93
Sdf4-201ENSMUST00000050078 Eppk1Q8R0W0 6548 aa2.94□□□□□ -1.94
Sdf4-201ENSMUST00000050078 Sprr2bO70554 98 aa2.82□□□□□ -1.96
Sdf4-201ENSMUST00000050078 1110025L11RikO09048 78 aa2.63□□□□□ -1.99
Sdf4-201ENSMUST00000050078 Krtap6-5Q925H3 78 aa2.63□□□□□ -1.99
Sdf4-201ENSMUST00000050078 Gm11568A2A4M2 211 aa2.63□□□□□ -1.99
Sdf4-201ENSMUST00000050078 Krtap9-1Q64526 186 aa2.63□□□□□ -1.99
Sdf4-201ENSMUST00000050078 Gpr98Q8VHN7 6298 aaKnown RBP2.52□□□□□ -2.01
Sdf4-201ENSMUST00000050078 Gm11559Q9D3H7 191 aa2.47□□□□□ -2.01
Sdf4-201ENSMUST00000050078 Gm11639A0A1D5RLM8 5808 aa2.47□□□□□ -2.01
Sdf4-201ENSMUST00000050078 Hmcn1D3YXG0 5634 aa2.47□□□□□ -2.01
Sdf4-201ENSMUST00000050078 Gm10229O08631 77 aa2.44□□□□□ -2.02
Sdf4-201ENSMUST00000050078 Phgr1Q8K0G7 91 aa2.34□□□□□ -2.03
Sdf4-201ENSMUST00000050078 Krtap5-2Q9D5Z7 189 aa2.31□□□□□ -2.04
Sdf4-201ENSMUST00000050078 Gm4553A0A1B0GSA9 284 aa2.14□□□□□ -2.07
Sdf4-201ENSMUST00000050078 AhnakE9Q616 5656 aaKnown RBP2.11□□□□□ -2.07
Sdf4-201ENSMUST00000050078 Gm45618A0A1B0GSA0 219 aa2.07□□□□□ -2.08
Sdf4-201ENSMUST00000050078 Gm10153A0A1B0GRL1 320 aa2.06□□□□□ -2.08
Sdf4-201ENSMUST00000050078 Gm2431E9Q8S1 172 aa2.06□□□□□ -2.08
Sdf4-201ENSMUST00000050078 Krtap6-2O08884 159 aa2□□□□□ -2.09
Sdf4-201ENSMUST00000050078 Gm39115A0A1B0GSH7 232 aa1.98□□□□□ -2.09
Sdf4-201ENSMUST00000050078 Gm45337A0A1B0GS71 263 aa1.94□□□□□ -2.1
Sdf4-201ENSMUST00000050078 Krtap21-1Q925H4 128 aa1.93□□□□□ -2.1
Sdf4-201ENSMUST00000050078 Gm29735A0A1B0GT06 219 aa1.92□□□□□ -2.1
Sdf4-201ENSMUST00000050078 Gm40460A0A1B0GR10 244 aa1.85□□□□□ -2.11
Sdf4-201ENSMUST00000050078 Gm7579A0A1B0GRJ4 243 aa1.85□□□□□ -2.11
Sdf4-201ENSMUST00000050078 Krtap5-5Q2TA51 241 aa1.85□□□□□ -2.11
Sdf4-201ENSMUST00000050078 Krtap5-4Q62220 223 aa1.85□□□□□ -2.11
Sdf4-201ENSMUST00000050078 Gm11567Q9D141 195 aa1.73□□□□□ -2.13
Sdf4-201ENSMUST00000050078 Krtap5-1Q64507 230 aa1.54□□□□□ -2.16
Sdf4-201ENSMUST00000050078 Gm4559A4IF42 199 aa1.29□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 97.1 ms