RNA–Protein interactions for RNA: ENSMUST00000047677.8

Ccdc18-201, Transcript of Coiled-coil domain-containing protein 18, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc18, Length 5,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc18-201ENSMUST00000047677 Eppk1Q8R0W0 6548 aa1.52□□□□□ -2.17
Ccdc18-201ENSMUST00000047677 Gm11639A0A1D5RLM8 5808 aa1.51□□□□□ -2.17
Ccdc18-201ENSMUST00000047677 Krtap9-3Q3V2C1 136 aa1.51□□□□□ -2.17
Ccdc18-201ENSMUST00000047677 2310079G19RikQ9D6L6 185 aa1.5□□□□□ -2.17
Ccdc18-201ENSMUST00000047677 Krtap31-2Q8CAY5 177 aa1.5□□□□□ -2.17
Ccdc18-201ENSMUST00000047677 Gm4559A4IF42 199 aa1.49□□□□□ -2.17
Ccdc18-201ENSMUST00000047677 B930094E09RikQ8C4T2 136 aa1.49□□□□□ -2.17
Ccdc18-201ENSMUST00000047677 Krtap20-2E9Q0A8 60 aa1.49□□□□□ -2.17
Ccdc18-201ENSMUST00000047677 Krtap3-1A2A591 98 aa1.48□□□□□ -2.17
Ccdc18-201ENSMUST00000047677 Lce1cQ9D1C5 147 aa1.47□□□□□ -2.17
Ccdc18-201ENSMUST00000047677 Gm11568A2A4M2 211 aa1.46□□□□□ -2.18
Ccdc18-201ENSMUST00000047677 Krtap9-1Q64526 186 aa1.46□□□□□ -2.18
Ccdc18-201ENSMUST00000047677 4933428G20RikQ9D3X4 101 aa1.46□□□□□ -2.18
Ccdc18-201ENSMUST00000047677 Crct1Q6PAI5 102 aa1.43□□□□□ -2.18
Ccdc18-201ENSMUST00000047677 Krtap9-5A2A5X3 358 aa1.42□□□□□ -2.18
Ccdc18-201ENSMUST00000047677 Syne1Q6ZWR6 8799 aa1.41□□□□□ -2.18
Ccdc18-201ENSMUST00000047677 Gm5965D3Z724 196 aa1.41□□□□□ -2.18
Ccdc18-201ENSMUST00000047677 2310057N15RikQ9D6T8 200 aa1.4□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 Krtap13-1Q8K198 168 aa1.4□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 Kmt2dQ6PDK2 5588 aa1.39□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 Fsip2A2ARZ3 6995 aa1.38□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 HrnrQ8VHD8 2496 aa1.38□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 Gpr98Q8VHN7 6298 aaKnown RBP1.38□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 Lce1fB9EJP6 147 aa1.37□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 Krtap31-1Q9D644 177 aa1.37□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 Krtap12-1Q9Z287 130 aa1.36□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 2300003K06RikA2A4M0 262 aa1.34□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 Gm9112A2AI92 75 aa1.34□□□□□ -2.19
Ccdc18-201ENSMUST00000047677 Prm2P07978 107 aa1.33□□□□□ -2.2
Ccdc18-201ENSMUST00000047677 Mt4P47945 62 aa1.33□□□□□ -2.2
Ccdc18-201ENSMUST00000047677 Hmcn1D3YXG0 5634 aa1.32□□□□□ -2.2
Ccdc18-201ENSMUST00000047677 Sprr2a3Q4KL71 83 aa1.32□□□□□ -2.2
Ccdc18-201ENSMUST00000047677 Sprr2a1Q9CQK8 83 aa1.32□□□□□ -2.2
Ccdc18-201ENSMUST00000047677 Gm11559Q9D3H7 191 aa1.3□□□□□ -2.2
Ccdc18-201ENSMUST00000047677 Gm10318A0A1W2P728 225 aa1.29□□□□□ -2.2
Ccdc18-201ENSMUST00000047677 Krtap19-9aF8WH65 55 aa1.27□□□□□ -2.21
Ccdc18-201ENSMUST00000047677 Muc19Q6PZE0 7524 aa1.26□□□□□ -2.21
Ccdc18-201ENSMUST00000047677 Macf1Q9QXZ0 7354 aaKnown RBP1.26□□□□□ -2.21
Ccdc18-201ENSMUST00000047677 Krtap19-9bQ99NG9 58 aa1.25□□□□□ -2.21
Ccdc18-201ENSMUST00000047677 Lce1kJ3QP15 125 aa1.25□□□□□ -2.21
Ccdc18-201ENSMUST00000047677 Mt2P02798 61 aa1.25□□□□□ -2.21
Ccdc18-201ENSMUST00000047677 Gm11567Q9D141 195 aa1.22□□□□□ -2.21
Ccdc18-201ENSMUST00000047677 AhnakE9Q616 5656 aaKnown RBP1.21□□□□□ -2.22
Ccdc18-201ENSMUST00000047677 2310046K23RikA0A0A6YVW6 87 aa1.2□□□□□ -2.22
Ccdc18-201ENSMUST00000047677 Krtap8-1O08633 61 aa1.19□□□□□ -2.22
Ccdc18-201ENSMUST00000047677 Gm10100J3QK64 120 aa1.18□□□□□ -2.22
Ccdc18-201ENSMUST00000047677 Krtap7-1Q9D3I6 87 aa1.17□□□□□ -2.22
Ccdc18-201ENSMUST00000047677 Gm11938Q9D3H4 131 aa1.16□□□□□ -2.22
Ccdc18-201ENSMUST00000047677 Krtap4-16Q91W93 202 aa1.14□□□□□ -2.23
Ccdc18-201ENSMUST00000047677 Sprr2kO70562 68 aa1.12□□□□□ -2.23
Ccdc18-201ENSMUST00000047677 DstQ91ZU6 7393 aaKnown RBP1.11□□□□□ -2.23
Ccdc18-201ENSMUST00000047677 Mt1P02802 61 aaKnown RBP1.09□□□□□ -2.23
Ccdc18-201ENSMUST00000047677 ObscnA2AAJ9 8891 aaKnown RBP1.08□□□□□ -2.24
Ccdc18-201ENSMUST00000047677 Krtap19-4Q925H7 84 aa1.08□□□□□ -2.24
Ccdc18-201ENSMUST00000047677 NebE9Q1W3 7152 aa1.06□□□□□ -2.24
Ccdc18-201ENSMUST00000047677 Krtap22-2J3QNX6 67 aa1.05□□□□□ -2.24
Ccdc18-201ENSMUST00000047677 Mt3P28184 68 aa1.05□□□□□ -2.24
Ccdc18-201ENSMUST00000047677 Sprr2gO70558 76 aa1.04□□□□□ -2.24
Ccdc18-201ENSMUST00000047677 Sprr2dO70555 85 aa1.03□□□□□ -2.24
Ccdc18-201ENSMUST00000047677 Gm10142J3KMP7 120 aa1.02□□□□□ -2.25
Ccdc18-201ENSMUST00000047677 Gm10272F7CZ33 110 aa1.01□□□□□ -2.25
Ccdc18-201ENSMUST00000047677 Lce3bQ9CQM7 98 aa1.01□□□□□ -2.25
Ccdc18-201ENSMUST00000047677 Lce3dE9Q8V1 98 aa1.01□□□□□ -2.25
Ccdc18-201ENSMUST00000047677 Sprr2iO70560 76 aa0.98□□□□□ -2.25
Ccdc18-201ENSMUST00000047677 Sprr2hO70559 108 aa0.97□□□□□ -2.25
Ccdc18-201ENSMUST00000047677 Lce3cQ91V05 98 aa0.96□□□□□ -2.26
Ccdc18-201ENSMUST00000047677 Lce3eF8VQJ0 98 aa0.94□□□□□ -2.26
Ccdc18-201ENSMUST00000047677 Lce3fQ6PAI4 98 aa0.94□□□□□ -2.26
Ccdc18-201ENSMUST00000047677 Lce3aQ497I5 98 aa0.94□□□□□ -2.26
Ccdc18-201ENSMUST00000047677 Sprr2bO70554 98 aa0.94□□□□□ -2.26
Ccdc18-201ENSMUST00000047677 Sprr2eO70556 76 aa0.93□□□□□ -2.26
Ccdc18-201ENSMUST00000047677 Sprr2fO70557 76 aa0.93□□□□□ -2.26
Ccdc18-201ENSMUST00000047677 Gm10024A0A0A0MQA4 119 aa0.91□□□□□ -2.26
Ccdc18-201ENSMUST00000047677 Muc16A0A140LJ72 8478 aa0.77□□□□□ -2.29
Ccdc18-201ENSMUST00000047677 Krtap21-1Q925H4 128 aa0.7□□□□□ -2.3
Ccdc18-201ENSMUST00000047677 1110025L11RikO09048 78 aa0.68□□□□□ -2.3
Ccdc18-201ENSMUST00000047677 Krtap6-5Q925H3 78 aa0.68□□□□□ -2.3
Ccdc18-201ENSMUST00000047677 Gm10229O08631 77 aa0.61□□□□□ -2.31
Ccdc18-201ENSMUST00000047677 Phgr1Q8K0G7 91 aa0.53□□□□□ -2.33
Ccdc18-201ENSMUST00000047677 Krtap6-2O08884 159 aa0.51□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 81 ms