RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Gm10024A0A0A0MQA4 119 aa2.24□□□□□ -2.05
Smc1a-201ENSMUST00000045312 Sprr2iO70560 76 aa2.24□□□□□ -2.05
Smc1a-201ENSMUST00000045312 Gm11938Q9D3H4 131 aa2.23□□□□□ -2.05
Smc1a-201ENSMUST00000045312 Lce1a2Q9D1K4 149 aa2.23□□□□□ -2.05
Smc1a-201ENSMUST00000045312 Hmcn2A2AJ76 5100 aa2.23□□□□□ -2.05
Smc1a-201ENSMUST00000045312 Krtap4-6Q3V4B7 195 aa2.21□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Rnf213E9Q555 5152 aaKnown RBP2.21□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Sprr2fO70557 76 aa2.21□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Lce1dQ9D731 133 aa2.18□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Sprr2dO70555 85 aa2.18□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Lce1fB9EJP6 147 aa2.17□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Lce1cQ9D1C5 147 aa2.17□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Lce1lQ9D1G7 135 aa2.17□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Gm11564A2A4L9 201 aa2.15□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Gm11595B1AQA7 289 aa2.15□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Krtap4-8B1AQA8 209 aa2.15□□□□□ -2.06
Smc1a-201ENSMUST00000045312 Krtap6-3A0A087WQL6 57 aa2.15□□□□□ -2.07
Smc1a-201ENSMUST00000045312 Muc5bE9Q5I3 4800 aa2.14□□□□□ -2.07
Smc1a-201ENSMUST00000045312 Mt4P47945 62 aa2.14□□□□□ -2.07
Smc1a-201ENSMUST00000045312 Krtap4-16Q91W93 202 aa2.14□□□□□ -2.07
Smc1a-201ENSMUST00000045312 Sprr2hO70559 108 aa2.14□□□□□ -2.07
Smc1a-201ENSMUST00000045312 A0A1Y7VLE6 161 aa2.09□□□□□ -2.07
Smc1a-201ENSMUST00000045312 Sprr2eO70556 76 aa2.09□□□□□ -2.07
Smc1a-201ENSMUST00000045312 Eppk1Q8R0W0 6548 aa2.09□□□□□ -2.08
Smc1a-201ENSMUST00000045312 ObscnA2AAJ9 8891 aaKnown RBP2.08□□□□□ -2.08
Smc1a-201ENSMUST00000045312 Krtap4-9B1AQA9 244 aa2.08□□□□□ -2.08
Smc1a-201ENSMUST00000045312 SspoQ8CG65 4998 aa2.05□□□□□ -2.08
Smc1a-201ENSMUST00000045312 DstQ91ZU6 7393 aaKnown RBP2.02□□□□□ -2.09
Smc1a-201ENSMUST00000045312 2300003K06RikA2A4M0 262 aa2□□□□□ -2.09
Smc1a-201ENSMUST00000045312 Krtap4-13Q9D7P3 165 aa1.99□□□□□ -2.09
Smc1a-201ENSMUST00000045312 A030003K21RikA0A1Y7VIM3 128 aa1.98□□□□□ -2.09
Smc1a-201ENSMUST00000045312 A0A1Y7VJH8 109 aa1.98□□□□□ -2.09
Smc1a-201ENSMUST00000045312 Lce1a1Q9CQH5 143 aa1.98□□□□□ -2.09
Smc1a-201ENSMUST00000045312 Mt3P28184 68 aa1.95□□□□□ -2.1
Smc1a-201ENSMUST00000045312 Fsip2A2ARZ3 6995 aa1.95□□□□□ -2.1
Smc1a-201ENSMUST00000045312 Krtap20-2E9Q0A8 60 aa1.94□□□□□ -2.1
Smc1a-201ENSMUST00000045312 Lce1kJ3QP15 125 aa1.93□□□□□ -2.1
Smc1a-201ENSMUST00000045312 Krtap28-10A0A1Y7VP58 119 aa1.88□□□□□ -2.11
Smc1a-201ENSMUST00000045312 Macf1Q9QXZ0 7354 aaKnown RBP1.88□□□□□ -2.11
Smc1a-201ENSMUST00000045312 Gpr98Q8VHN7 6298 aaKnown RBP1.87□□□□□ -2.11
Smc1a-201ENSMUST00000045312 Gm6217A0A1Y7VJK9 128 aa1.86□□□□□ -2.11
Smc1a-201ENSMUST00000045312 A0A1Y7VJ07 166 aa1.84□□□□□ -2.12
Smc1a-201ENSMUST00000045312 Krtap28-13A0A087WQP5 138 aa1.82□□□□□ -2.12
Smc1a-201ENSMUST00000045312 A030005K14RikA0A1Y7VNY1 122 aa1.82□□□□□ -2.12
Smc1a-201ENSMUST00000045312 Mt1P02802 61 aaKnown RBP1.79□□□□□ -2.12
Smc1a-201ENSMUST00000045312 Gm7544A0A1Y7VJ58 118 aa1.77□□□□□ -2.13
Smc1a-201ENSMUST00000045312 A030005L19RikA0A1Y7VIU2 113 aa1.75□□□□□ -2.13
Smc1a-201ENSMUST00000045312 NebE9Q1W3 7152 aa1.74□□□□□ -2.13
Smc1a-201ENSMUST00000045312 Gm11639A0A1D5RLM8 5808 aa1.73□□□□□ -2.13
Smc1a-201ENSMUST00000045312 Muc19Q6PZE0 7524 aa1.71□□□□□ -2.13
Smc1a-201ENSMUST00000045312 Gm11554B1AQB2 190 aa1.71□□□□□ -2.14
Smc1a-201ENSMUST00000045312 Krtap9-1Q64526 186 aa1.67□□□□□ -2.14
Smc1a-201ENSMUST00000045312 Kmt2dQ6PDK2 5588 aa1.62□□□□□ -2.15
Smc1a-201ENSMUST00000045312 A030014E15RikA0A1Y7VJV2 120 aa1.61□□□□□ -2.15
Smc1a-201ENSMUST00000045312 Sprr2bO70554 98 aa1.57□□□□□ -2.16
Smc1a-201ENSMUST00000045312 Hmcn1D3YXG0 5634 aa1.53□□□□□ -2.16
Smc1a-201ENSMUST00000045312 Krtap5-2Q9D5Z7 189 aa1.51□□□□□ -2.17
Smc1a-201ENSMUST00000045312 Gm4553A0A1B0GSA9 284 aa1.51□□□□□ -2.17
Smc1a-201ENSMUST00000045312 Gm11568A2A4M2 211 aa1.5□□□□□ -2.17
Smc1a-201ENSMUST00000045312 A0A286YCP9 139 aa1.48□□□□□ -2.17
Smc1a-201ENSMUST00000045312 1110025L11RikO09048 78 aa1.45□□□□□ -2.18
Smc1a-201ENSMUST00000045312 Krtap6-5Q925H3 78 aa1.45□□□□□ -2.18
Smc1a-201ENSMUST00000045312 Gm2431E9Q8S1 172 aa1.42□□□□□ -2.18
Smc1a-201ENSMUST00000045312 Phgr1Q8K0G7 91 aa1.39□□□□□ -2.19
Smc1a-201ENSMUST00000045312 Gm39115A0A1B0GSH7 232 aa1.36□□□□□ -2.19
Smc1a-201ENSMUST00000045312 Gm45337A0A1B0GS71 263 aa1.36□□□□□ -2.19
Smc1a-201ENSMUST00000045312 Gm45618A0A1B0GSA0 219 aa1.35□□□□□ -2.19
Smc1a-201ENSMUST00000045312 Gm10229O08631 77 aa1.34□□□□□ -2.19
Smc1a-201ENSMUST00000045312 Gm40460A0A1B0GR10 244 aa1.31□□□□□ -2.2
Smc1a-201ENSMUST00000045312 Gm7579A0A1B0GRJ4 243 aa1.31□□□□□ -2.2
Smc1a-201ENSMUST00000045312 Krtap5-5Q2TA51 241 aa1.31□□□□□ -2.2
Smc1a-201ENSMUST00000045312 Krtap5-4Q62220 223 aa1.31□□□□□ -2.2
Smc1a-201ENSMUST00000045312 AhnakE9Q616 5656 aaKnown RBP1.31□□□□□ -2.2
Smc1a-201ENSMUST00000045312 Gm10153A0A1B0GRL1 320 aa1.27□□□□□ -2.21
Smc1a-201ENSMUST00000045312 Gm11567Q9D141 195 aa1.27□□□□□ -2.21
Smc1a-201ENSMUST00000045312 Krtap6-2O08884 159 aa1.11□□□□□ -2.23
Smc1a-201ENSMUST00000045312 Krtap21-1Q925H4 128 aa1.07□□□□□ -2.24
Smc1a-201ENSMUST00000045312 Gm29735A0A1B0GT06 219 aa0.95□□□□□ -2.26
Smc1a-201ENSMUST00000045312 Gm4559A4IF42 199 aa0.92□□□□□ -2.26
Smc1a-201ENSMUST00000045312 Krtap5-1Q64507 230 aa0.88□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 168.1 ms