RNA–Protein interactions for RNA: ENSMUST00000044565.14

Col16a1-201, Transcript of Collagen alpha-1(XVI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col16a1, Length 5,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1-201ENSMUST00000044565 Muc5bE9Q5I3 4800 aa4.9□□□□□ -1.62
Col16a1-201ENSMUST00000044565 Gm11564A2A4L9 201 aa4.83□□□□□ -1.64
Col16a1-201ENSMUST00000044565 Gm11563B1AQ90 168 aa4.83□□□□□ -1.64
Col16a1-201ENSMUST00000044565 Gm11595B1AQA7 289 aa4.83□□□□□ -1.64
Col16a1-201ENSMUST00000044565 Krtap4-8B1AQA8 209 aa4.83□□□□□ -1.64
Col16a1-201ENSMUST00000044565 Rnf213E9Q555 5152 aaKnown RBP4.83□□□□□ -1.64
Col16a1-201ENSMUST00000044565 Krtap17-1A2A5X6 109 aa4.76□□□□□ -1.65
Col16a1-201ENSMUST00000044565 Krtap4-9B1AQA9 244 aa4.76□□□□□ -1.65
Col16a1-201ENSMUST00000044565 Hmcn2A2AJ76 5100 aa4.73□□□□□ -1.65
Col16a1-201ENSMUST00000044565 2300003K06RikA2A4M0 262 aa4.69□□□□□ -1.66
Col16a1-201ENSMUST00000044565 Gm11562A0PK51 136 aa4.66□□□□□ -1.66
Col16a1-201ENSMUST00000044565 Krtap4-7Q9D732 168 aa4.65□□□□□ -1.66
Col16a1-201ENSMUST00000044565 SspoQ8CG65 4998 aa4.61□□□□□ -1.67
Col16a1-201ENSMUST00000044565 Gm11938Q9D3H4 131 aa4.61□□□□□ -1.67
Col16a1-201ENSMUST00000044565 Krtap4-13Q9D7P3 165 aa4.6□□□□□ -1.67
Col16a1-201ENSMUST00000044565 Syne2Q6ZWQ0 6874 aaKnown RBP4.6□□□□□ -1.67
Col16a1-201ENSMUST00000044565 Sprr2dO70555 85 aa4.6□□□□□ -1.67
Col16a1-201ENSMUST00000044565 Sprr2hO70559 108 aa4.51□□□□□ -1.69
Col16a1-201ENSMUST00000044565 Lce1kJ3QP15 125 aa4.49□□□□□ -1.69
Col16a1-201ENSMUST00000044565 Syne1Q6ZWR6 8799 aa4.45□□□□□ -1.7
Col16a1-201ENSMUST00000044565 Krtap6-3A0A087WQL6 57 aa4.43□□□□□ -1.7
Col16a1-201ENSMUST00000044565 Mt3P28184 68 aa4.42□□□□□ -1.7
Col16a1-201ENSMUST00000044565 Fsip2A2ARZ3 6995 aa4.4□□□□□ -1.71
Col16a1-201ENSMUST00000044565 Krtap31-1Q9D644 177 aa4.29□□□□□ -1.72
Col16a1-201ENSMUST00000044565 Lce1a1Q9CQH5 143 aa4.28□□□□□ -1.72
Col16a1-201ENSMUST00000044565 Gm11555B1AQ89 175 aa4.17□□□□□ -1.74
Col16a1-201ENSMUST00000044565 Mt1P02802 61 aaKnown RBP4.12□□□□□ -1.75
Col16a1-201ENSMUST00000044565 Krtap20-2E9Q0A8 60 aa4.04□□□□□ -1.76
Col16a1-201ENSMUST00000044565 Gm11554B1AQB2 190 aa4.03□□□□□ -1.76
Col16a1-201ENSMUST00000044565 Eppk1Q8R0W0 6548 aa4□□□□□ -1.77
Col16a1-201ENSMUST00000044565 Muc16A0A140LJ72 8478 aa3.95□□□□□ -1.78
Col16a1-201ENSMUST00000044565 ObscnA2AAJ9 8891 aaKnown RBP3.83□□□□□ -1.8
Col16a1-201ENSMUST00000044565 Krtap4-16Q91W93 202 aa3.78□□□□□ -1.8
Col16a1-201ENSMUST00000044565 Sprr2bO70554 98 aa3.74□□□□□ -1.81
Col16a1-201ENSMUST00000044565 Kmt2dQ6PDK2 5588 aa3.55□□□□□ -1.84
Col16a1-201ENSMUST00000044565 Macf1Q9QXZ0 7354 aaKnown RBP3.53□□□□□ -1.84
Col16a1-201ENSMUST00000044565 DstQ91ZU6 7393 aaKnown RBP3.5□□□□□ -1.85
Col16a1-201ENSMUST00000044565 Krtap31-2Q8CAY5 177 aa3.48□□□□□ -1.85
Col16a1-201ENSMUST00000044565 Gm11559Q9D3H7 191 aa3.47□□□□□ -1.85
Col16a1-201ENSMUST00000044565 Gm11568A2A4M2 211 aa3.4□□□□□ -1.86
Col16a1-201ENSMUST00000044565 Krtap9-1Q64526 186 aa3.4□□□□□ -1.86
Col16a1-201ENSMUST00000044565 1110025L11RikO09048 78 aa3.35□□□□□ -1.87
Col16a1-201ENSMUST00000044565 Krtap6-5Q925H3 78 aa3.35□□□□□ -1.87
Col16a1-201ENSMUST00000044565 NebE9Q1W3 7152 aa3.34□□□□□ -1.88
Col16a1-201ENSMUST00000044565 Krtap5-2Q9D5Z7 189 aa3.26□□□□□ -1.89
Col16a1-201ENSMUST00000044565 Gm10229O08631 77 aa3.15□□□□□ -1.91
Col16a1-201ENSMUST00000044565 Gm11639A0A1D5RLM8 5808 aa3.15□□□□□ -1.91
Col16a1-201ENSMUST00000044565 Gpr98Q8VHN7 6298 aaKnown RBP3.12□□□□□ -1.91
Col16a1-201ENSMUST00000044565 Gm4553A0A1B0GSA9 284 aa3.09□□□□□ -1.92
Col16a1-201ENSMUST00000044565 Muc19Q6PZE0 7524 aa3□□□□□ -1.93
Col16a1-201ENSMUST00000044565 Hmcn1D3YXG0 5634 aa2.99□□□□□ -1.93
Col16a1-201ENSMUST00000044565 A030005L19RikA0A1Y7VIU2 113 aa2.91□□□□□ -1.94
Col16a1-201ENSMUST00000044565 Gm2431E9Q8S1 172 aa2.9□□□□□ -1.95
Col16a1-201ENSMUST00000044565 Gm10153A0A1B0GRL1 320 aa2.81□□□□□ -1.96
Col16a1-201ENSMUST00000044565 Gm45337A0A1B0GS71 263 aa2.77□□□□□ -1.97
Col16a1-201ENSMUST00000044565 Phgr1Q8K0G7 91 aa2.75□□□□□ -1.97
Col16a1-201ENSMUST00000044565 AhnakE9Q616 5656 aaKnown RBP2.74□□□□□ -1.97
Col16a1-201ENSMUST00000044565 Gm40460A0A1B0GR10 244 aa2.74□□□□□ -1.97
Col16a1-201ENSMUST00000044565 Gm7579A0A1B0GRJ4 243 aa2.74□□□□□ -1.97
Col16a1-201ENSMUST00000044565 Krtap5-5Q2TA51 241 aa2.74□□□□□ -1.97
Col16a1-201ENSMUST00000044565 Krtap5-4Q62220 223 aa2.74□□□□□ -1.97
Col16a1-201ENSMUST00000044565 A0A1Y7VJH8 109 aa2.67□□□□□ -1.98
Col16a1-201ENSMUST00000044565 Gm39115A0A1B0GSH7 232 aa2.57□□□□□ -2
Col16a1-201ENSMUST00000044565 Krtap6-2O08884 159 aa2.56□□□□□ -2
Col16a1-201ENSMUST00000044565 Krtap21-1Q925H4 128 aa2.4□□□□□ -2.03
Col16a1-201ENSMUST00000044565 Gm45618A0A1B0GSA0 219 aa2.27□□□□□ -2.05
Col16a1-201ENSMUST00000044565 Gm11567Q9D141 195 aa2.14□□□□□ -2.07
Col16a1-201ENSMUST00000044565 A0A1Y7VLE6 161 aa2.08□□□□□ -2.08
Col16a1-201ENSMUST00000044565 Gm29735A0A1B0GT06 219 aa2.06□□□□□ -2.08
Col16a1-201ENSMUST00000044565 Krtap5-1Q64507 230 aa1.56□□□□□ -2.16
Col16a1-201ENSMUST00000044565 A0A286YCP9 139 aa1.4□□□□□ -2.19
Col16a1-201ENSMUST00000044565 A0A1Y7VJ07 166 aa1.38□□□□□ -2.19
Col16a1-201ENSMUST00000044565 Gm4559A4IF42 199 aa1.08□□□□□ -2.24
Col16a1-201ENSMUST00000044565 A030014E15RikA0A1Y7VJV2 120 aa1.07□□□□□ -2.24
Col16a1-201ENSMUST00000044565 Krtap28-13A0A087WQP5 138 aa1.06□□□□□ -2.24
Col16a1-201ENSMUST00000044565 A030003K21RikA0A1Y7VIM3 128 aa1.03□□□□□ -2.24
Col16a1-201ENSMUST00000044565 Gm6217A0A1Y7VJK9 128 aa0.86□□□□□ -2.27
Col16a1-201ENSMUST00000044565 Krtap28-10A0A1Y7VP58 119 aa0.63□□□□□ -2.31
Col16a1-201ENSMUST00000044565 A030005K14RikA0A1Y7VNY1 122 aa0.56□□□□□ -2.32
Col16a1-201ENSMUST00000044565 Gm7544A0A1Y7VJ58 118 aa0.14□□□□□ -2.39
Retrieved 80 of 22,080 RNA–protein pairs in 180.8 ms