RNA–Protein interactions for RNA: ENSMUST00000042857.13

Satb2-201, Transcript of DNA-binding protein SATB2, mousemouse

TSL 1 (best) BASIC

Gene Satb2, Length 6,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Satb2-201ENSMUST00000042857 Krtap31-1Q9D644 177 aa4.26□□□□□ -1.73
Satb2-201ENSMUST00000042857 Sprr2dO70555 85 aa4.25□□□□□ -1.73
Satb2-201ENSMUST00000042857 Krtap4-1Q3UUY3 169 aa4.23□□□□□ -1.73
Satb2-201ENSMUST00000042857 Ush2AQ2QI47 5193 aa4.2□□□□□ -1.74
Satb2-201ENSMUST00000042857 Gm11596B1AQB0 205 aa4.14□□□□□ -1.75
Satb2-201ENSMUST00000042857 Gm11564A2A4L9 201 aa4.11□□□□□ -1.75
Satb2-201ENSMUST00000042857 Gm11563B1AQ90 168 aa4.11□□□□□ -1.75
Satb2-201ENSMUST00000042857 Gm11595B1AQA7 289 aa4.11□□□□□ -1.75
Satb2-201ENSMUST00000042857 Krtap4-8B1AQA8 209 aa4.11□□□□□ -1.75
Satb2-201ENSMUST00000042857 2300003K06RikA2A4M0 262 aa4.09□□□□□ -1.75
Satb2-201ENSMUST00000042857 Krtap4-16Q91W93 202 aa4.09□□□□□ -1.75
Satb2-201ENSMUST00000042857 Krtap4-9B1AQA9 244 aa4.09□□□□□ -1.76
Satb2-201ENSMUST00000042857 Rnf213E9Q555 5152 aaKnown RBP4.06□□□□□ -1.76
Satb2-201ENSMUST00000042857 Sprr2hO70559 108 aa4.02□□□□□ -1.77
Satb2-201ENSMUST00000042857 Krtap4-7Q9D732 168 aa4.01□□□□□ -1.77
Satb2-201ENSMUST00000042857 Muc5bE9Q5I3 4800 aa4.01□□□□□ -1.77
Satb2-201ENSMUST00000042857 Krtap4-13Q9D7P3 165 aa4□□□□□ -1.77
Satb2-201ENSMUST00000042857 Fsip2A2ARZ3 6995 aa3.98□□□□□ -1.77
Satb2-201ENSMUST00000042857 Gm11562A0PK51 136 aa3.96□□□□□ -1.78
Satb2-201ENSMUST00000042857 Lce1kJ3QP15 125 aa3.94□□□□□ -1.78
Satb2-201ENSMUST00000042857 Gm11938Q9D3H4 131 aa3.93□□□□□ -1.78
Satb2-201ENSMUST00000042857 Lce1a1Q9CQH5 143 aa3.87□□□□□ -1.79
Satb2-201ENSMUST00000042857 Syne2Q6ZWQ0 6874 aaKnown RBP3.83□□□□□ -1.8
Satb2-201ENSMUST00000042857 SspoQ8CG65 4998 aa3.8□□□□□ -1.8
Satb2-201ENSMUST00000042857 Sprr2bO70554 98 aa3.8□□□□□ -1.8
Satb2-201ENSMUST00000042857 Mt3P28184 68 aa3.72□□□□□ -1.81
Satb2-201ENSMUST00000042857 Muc16A0A140LJ72 8478 aa3.7□□□□□ -1.82
Satb2-201ENSMUST00000042857 Krtap31-2Q8CAY5 177 aa3.64□□□□□ -1.83
Satb2-201ENSMUST00000042857 Gm11554B1AQB2 190 aa3.55□□□□□ -1.84
Satb2-201ENSMUST00000042857 A0A1Y7VLE6 161 aa3.54□□□□□ -1.84
Satb2-201ENSMUST00000042857 Krtap6-3A0A087WQL6 57 aa3.53□□□□□ -1.84
Satb2-201ENSMUST00000042857 Mt1P02802 61 aaKnown RBP3.5□□□□□ -1.85
Satb2-201ENSMUST00000042857 Krtap20-2E9Q0A8 60 aa3.49□□□□□ -1.85
Satb2-201ENSMUST00000042857 ObscnA2AAJ9 8891 aaKnown RBP3.47□□□□□ -1.85
Satb2-201ENSMUST00000042857 A0A1Y7VJH8 109 aa3.28□□□□□ -1.88
Satb2-201ENSMUST00000042857 Krtap28-10A0A1Y7VP58 119 aa3.27□□□□□ -1.89
Satb2-201ENSMUST00000042857 Gm11555B1AQ89 175 aa3.25□□□□□ -1.89
Satb2-201ENSMUST00000042857 A030003K21RikA0A1Y7VIM3 128 aa3.16□□□□□ -1.9
Satb2-201ENSMUST00000042857 Krtap28-13A0A087WQP5 138 aa3.1□□□□□ -1.91
Satb2-201ENSMUST00000042857 Macf1Q9QXZ0 7354 aaKnown RBP3.09□□□□□ -1.91
Satb2-201ENSMUST00000042857 A030005L19RikA0A1Y7VIU2 113 aa3.07□□□□□ -1.92
Satb2-201ENSMUST00000042857 Gm7544A0A1Y7VJ58 118 aa3.03□□□□□ -1.92
Satb2-201ENSMUST00000042857 A030005K14RikA0A1Y7VNY1 122 aa3□□□□□ -1.93
Satb2-201ENSMUST00000042857 NebE9Q1W3 7152 aa2.99□□□□□ -1.93
Satb2-201ENSMUST00000042857 DstQ91ZU6 7393 aaKnown RBP2.97□□□□□ -1.93
Satb2-201ENSMUST00000042857 Gm6217A0A1Y7VJK9 128 aa2.95□□□□□ -1.94
Satb2-201ENSMUST00000042857 A0A1Y7VJ07 166 aa2.9□□□□□ -1.94
Satb2-201ENSMUST00000042857 Muc19Q6PZE0 7524 aa2.9□□□□□ -1.94
Satb2-201ENSMUST00000042857 Gm11568A2A4M2 211 aa2.89□□□□□ -1.95
Satb2-201ENSMUST00000042857 Krtap9-1Q64526 186 aa2.89□□□□□ -1.95
Satb2-201ENSMUST00000042857 Kmt2dQ6PDK2 5588 aa2.84□□□□□ -1.95
Satb2-201ENSMUST00000042857 1110025L11RikO09048 78 aa2.83□□□□□ -1.96
Satb2-201ENSMUST00000042857 Krtap6-5Q925H3 78 aa2.83□□□□□ -1.96
Satb2-201ENSMUST00000042857 Eppk1Q8R0W0 6548 aa2.79□□□□□ -1.96
Satb2-201ENSMUST00000042857 Gm11559Q9D3H7 191 aa2.79□□□□□ -1.96
Satb2-201ENSMUST00000042857 Phgr1Q8K0G7 91 aa2.75□□□□□ -1.97
Satb2-201ENSMUST00000042857 A030014E15RikA0A1Y7VJV2 120 aa2.68□□□□□ -1.98
Satb2-201ENSMUST00000042857 Gm10229O08631 77 aa2.68□□□□□ -1.98
Satb2-201ENSMUST00000042857 Gm11639A0A1D5RLM8 5808 aa2.56□□□□□ -2
Satb2-201ENSMUST00000042857 Gpr98Q8VHN7 6298 aaKnown RBP2.56□□□□□ -2
Satb2-201ENSMUST00000042857 Krtap5-2Q9D5Z7 189 aa2.51□□□□□ -2.01
Satb2-201ENSMUST00000042857 Hmcn1D3YXG0 5634 aa2.42□□□□□ -2.02
Satb2-201ENSMUST00000042857 Gm11567Q9D141 195 aa2.36□□□□□ -2.03
Satb2-201ENSMUST00000042857 Gm4553A0A1B0GSA9 284 aa2.33□□□□□ -2.04
Satb2-201ENSMUST00000042857 Gm2431E9Q8S1 172 aa2.28□□□□□ -2.05
Satb2-201ENSMUST00000042857 Gm10153A0A1B0GRL1 320 aa2.21□□□□□ -2.06
Satb2-201ENSMUST00000042857 AhnakE9Q616 5656 aaKnown RBP2.16□□□□□ -2.06
Satb2-201ENSMUST00000042857 Krtap6-2O08884 159 aa2.15□□□□□ -2.06
Satb2-201ENSMUST00000042857 Gm45337A0A1B0GS71 263 aa2.13□□□□□ -2.07
Satb2-201ENSMUST00000042857 Gm40460A0A1B0GR10 244 aa2.09□□□□□ -2.08
Satb2-201ENSMUST00000042857 Gm7579A0A1B0GRJ4 243 aa2.09□□□□□ -2.08
Satb2-201ENSMUST00000042857 Krtap5-5Q2TA51 241 aa2.09□□□□□ -2.08
Satb2-201ENSMUST00000042857 Krtap5-4Q62220 223 aa2.09□□□□□ -2.08
Satb2-201ENSMUST00000042857 A0A286YCP9 139 aa2.07□□□□□ -2.08
Satb2-201ENSMUST00000042857 Krtap21-1Q925H4 128 aa2.05□□□□□ -2.08
Satb2-201ENSMUST00000042857 Gm39115A0A1B0GSH7 232 aa1.97□□□□□ -2.09
Satb2-201ENSMUST00000042857 Gm45618A0A1B0GSA0 219 aa1.78□□□□□ -2.13
Satb2-201ENSMUST00000042857 Gm29735A0A1B0GT06 219 aa1.56□□□□□ -2.16
Satb2-201ENSMUST00000042857 Krtap5-1Q64507 230 aa1.24□□□□□ -2.21
Satb2-201ENSMUST00000042857 Gm4559A4IF42 199 aa1.01□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 56.7 ms