RNA–Protein interactions for RNA: ENSMUST00000042824.12

Herc1-201, Transcript of HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Herc1, Length 15,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1-201ENSMUST00000042824 Lce1a2Q9D1K4 149 aa1.84□□□□□ -2.12
Herc1-201ENSMUST00000042824 Ush2AQ2QI47 5193 aa1.83□□□□□ -2.12
Herc1-201ENSMUST00000042824 Krtap4-1Q3UUY3 169 aa1.82□□□□□ -2.12
Herc1-201ENSMUST00000042824 Eppk1Q8R0W0 6548 aa1.82□□□□□ -2.12
Herc1-201ENSMUST00000042824 Sprr2dO70555 85 aa1.81□□□□□ -2.12
Herc1-201ENSMUST00000042824 Hmcn2A2AJ76 5100 aa1.81□□□□□ -2.12
Herc1-201ENSMUST00000042824 Gm11564A2A4L9 201 aa1.8□□□□□ -2.12
Herc1-201ENSMUST00000042824 Gm11563B1AQ90 168 aa1.8□□□□□ -2.12
Herc1-201ENSMUST00000042824 Gm11595B1AQA7 289 aa1.8□□□□□ -2.12
Herc1-201ENSMUST00000042824 Krtap4-8B1AQA8 209 aa1.8□□□□□ -2.12
Herc1-201ENSMUST00000042824 Syne2Q6ZWQ0 6874 aaKnown RBP1.8□□□□□ -2.12
Herc1-201ENSMUST00000042824 Fsip2A2ARZ3 6995 aa1.8□□□□□ -2.12
Herc1-201ENSMUST00000042824 Gm11938Q9D3H4 131 aa1.8□□□□□ -2.12
Herc1-201ENSMUST00000042824 Krtap4-9B1AQA9 244 aa1.78□□□□□ -2.12
Herc1-201ENSMUST00000042824 Krtap4-7Q9D732 168 aa1.75□□□□□ -2.13
Herc1-201ENSMUST00000042824 2300003K06RikA2A4M0 262 aa1.75□□□□□ -2.13
Herc1-201ENSMUST00000042824 Syne1Q6ZWR6 8799 aa1.75□□□□□ -2.13
Herc1-201ENSMUST00000042824 Sprr2hO70559 108 aa1.75□□□□□ -2.13
Herc1-201ENSMUST00000042824 SspoQ8CG65 4998 aa1.75□□□□□ -2.13
Herc1-201ENSMUST00000042824 Krtap6-3A0A087WQL6 57 aa1.73□□□□□ -2.13
Herc1-201ENSMUST00000042824 Krtap4-13Q9D7P3 165 aa1.7□□□□□ -2.14
Herc1-201ENSMUST00000042824 Krtap31-1Q9D644 177 aa1.7□□□□□ -2.14
Herc1-201ENSMUST00000042824 Krtap31-2Q8CAY5 177 aa1.7□□□□□ -2.14
Herc1-201ENSMUST00000042824 Mt3P28184 68 aa1.69□□□□□ -2.14
Herc1-201ENSMUST00000042824 Lce1kJ3QP15 125 aa1.68□□□□□ -2.14
Herc1-201ENSMUST00000042824 Mt1P02802 61 aaKnown RBP1.65□□□□□ -2.14
Herc1-201ENSMUST00000042824 Lce1a1Q9CQH5 143 aa1.62□□□□□ -2.15
Herc1-201ENSMUST00000042824 Krtap17-1A2A5X6 109 aa1.61□□□□□ -2.15
Herc1-201ENSMUST00000042824 Gm11555B1AQ89 175 aa1.58□□□□□ -2.16
Herc1-201ENSMUST00000042824 ObscnA2AAJ9 8891 aaKnown RBP1.57□□□□□ -2.16
Herc1-201ENSMUST00000042824 Macf1Q9QXZ0 7354 aaKnown RBP1.56□□□□□ -2.16
Herc1-201ENSMUST00000042824 Krtap20-2E9Q0A8 60 aa1.54□□□□□ -2.16
Herc1-201ENSMUST00000042824 DstQ91ZU6 7393 aaKnown RBP1.53□□□□□ -2.16
Herc1-201ENSMUST00000042824 Krtap4-16Q91W93 202 aa1.53□□□□□ -2.16
Herc1-201ENSMUST00000042824 Sprr2bO70554 98 aa1.5□□□□□ -2.17
Herc1-201ENSMUST00000042824 Gm11554B1AQB2 190 aa1.48□□□□□ -2.17
Herc1-201ENSMUST00000042824 Muc16A0A140LJ72 8478 aa1.47□□□□□ -2.17
Herc1-201ENSMUST00000042824 NebE9Q1W3 7152 aa1.41□□□□□ -2.18
Herc1-201ENSMUST00000042824 Gpr98Q8VHN7 6298 aaKnown RBP1.4□□□□□ -2.18
Herc1-201ENSMUST00000042824 Kmt2dQ6PDK2 5588 aa1.39□□□□□ -2.19
Herc1-201ENSMUST00000042824 Gm11639A0A1D5RLM8 5808 aa1.34□□□□□ -2.2
Herc1-201ENSMUST00000042824 Gm11559Q9D3H7 191 aa1.34□□□□□ -2.2
Herc1-201ENSMUST00000042824 1110025L11RikO09048 78 aa1.3□□□□□ -2.2
Herc1-201ENSMUST00000042824 Krtap6-5Q925H3 78 aa1.3□□□□□ -2.2
Herc1-201ENSMUST00000042824 Krtap5-2Q9D5Z7 189 aa1.28□□□□□ -2.2
Herc1-201ENSMUST00000042824 Gm11568A2A4M2 211 aa1.27□□□□□ -2.21
Herc1-201ENSMUST00000042824 Krtap9-1Q64526 186 aa1.27□□□□□ -2.21
Herc1-201ENSMUST00000042824 Muc19Q6PZE0 7524 aa1.25□□□□□ -2.21
Herc1-201ENSMUST00000042824 Gm4553A0A1B0GSA9 284 aa1.22□□□□□ -2.21
Herc1-201ENSMUST00000042824 Gm10229O08631 77 aa1.21□□□□□ -2.22
Herc1-201ENSMUST00000042824 A030005L19RikA0A1Y7VIU2 113 aa1.2□□□□□ -2.22
Herc1-201ENSMUST00000042824 Hmcn1D3YXG0 5634 aa1.19□□□□□ -2.22
Herc1-201ENSMUST00000042824 AhnakE9Q616 5656 aaKnown RBP1.14□□□□□ -2.23
Herc1-201ENSMUST00000042824 Gm45337A0A1B0GS71 263 aa1.1□□□□□ -2.23
Herc1-201ENSMUST00000042824 Gm40460A0A1B0GR10 244 aa1.1□□□□□ -2.23
Herc1-201ENSMUST00000042824 Gm7579A0A1B0GRJ4 243 aa1.1□□□□□ -2.23
Herc1-201ENSMUST00000042824 Krtap5-5Q2TA51 241 aa1.1□□□□□ -2.23
Herc1-201ENSMUST00000042824 Krtap5-4Q62220 223 aa1.1□□□□□ -2.23
Herc1-201ENSMUST00000042824 Gm10153A0A1B0GRL1 320 aa1.08□□□□□ -2.24
Herc1-201ENSMUST00000042824 Gm2431E9Q8S1 172 aa1.08□□□□□ -2.24
Herc1-201ENSMUST00000042824 Phgr1Q8K0G7 91 aa1.06□□□□□ -2.24
Herc1-201ENSMUST00000042824 A0A1Y7VJH8 109 aa1.05□□□□□ -2.24
Herc1-201ENSMUST00000042824 Gm39115A0A1B0GSH7 232 aa1.04□□□□□ -2.24
Herc1-201ENSMUST00000042824 A0A1Y7VLE6 161 aa1.03□□□□□ -2.24
Herc1-201ENSMUST00000042824 Krtap6-2O08884 159 aa0.99□□□□□ -2.25
Herc1-201ENSMUST00000042824 Gm11567Q9D141 195 aa0.98□□□□□ -2.25
Herc1-201ENSMUST00000042824 Krtap21-1Q925H4 128 aa0.94□□□□□ -2.26
Herc1-201ENSMUST00000042824 Gm45618A0A1B0GSA0 219 aa0.93□□□□□ -2.26
Herc1-201ENSMUST00000042824 Gm29735A0A1B0GT06 219 aa0.84□□□□□ -2.28
Herc1-201ENSMUST00000042824 A0A1Y7VJ07 166 aa0.82□□□□□ -2.28
Herc1-201ENSMUST00000042824 A0A286YCP9 139 aa0.81□□□□□ -2.28
Herc1-201ENSMUST00000042824 Krtap28-13A0A087WQP5 138 aa0.63□□□□□ -2.31
Herc1-201ENSMUST00000042824 Krtap5-1Q64507 230 aa0.58□□□□□ -2.32
Herc1-201ENSMUST00000042824 A030014E15RikA0A1Y7VJV2 120 aa0.5□□□□□ -2.33
Herc1-201ENSMUST00000042824 Krtap28-10A0A1Y7VP58 119 aa0.46□□□□□ -2.34
Herc1-201ENSMUST00000042824 A030005K14RikA0A1Y7VNY1 122 aa0.45□□□□□ -2.34
Herc1-201ENSMUST00000042824 Gm4559A4IF42 199 aa0.41□□□□□ -2.34
Herc1-201ENSMUST00000042824 A030003K21RikA0A1Y7VIM3 128 aa0.41□□□□□ -2.34
Herc1-201ENSMUST00000042824 Gm6217A0A1Y7VJK9 128 aa0.39□□□□□ -2.35
Herc1-201ENSMUST00000042824 Gm7544A0A1Y7VJ58 118 aa0.38□□□□□ -2.35
Retrieved 80 of 22,080 RNA–protein pairs in 12.7 ms