RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Fsip2A2ARZ3 6995 aa5.01□□□□□ -1.61
Ubfd1-201ENSMUST00000033158 Krtap17-1A2A5X6 109 aa4.99□□□□□ -1.61
Ubfd1-201ENSMUST00000033158 Hmcn2A2AJ76 5100 aa4.97□□□□□ -1.61
Ubfd1-201ENSMUST00000033158 Krtap4-1Q3UUY3 169 aa4.97□□□□□ -1.61
Ubfd1-201ENSMUST00000033158 Sprr2dO70555 85 aa4.96□□□□□ -1.62
Ubfd1-201ENSMUST00000033158 Muc5bE9Q5I3 4800 aa4.95□□□□□ -1.62
Ubfd1-201ENSMUST00000033158 Gm11596B1AQB0 205 aa4.93□□□□□ -1.62
Ubfd1-201ENSMUST00000033158 Sprr2hO70559 108 aa4.91□□□□□ -1.62
Ubfd1-201ENSMUST00000033158 Gm11562A0PK51 136 aa4.86□□□□□ -1.63
Ubfd1-201ENSMUST00000033158 Gm11564A2A4L9 201 aa4.86□□□□□ -1.63
Ubfd1-201ENSMUST00000033158 Gm11563B1AQ90 168 aa4.86□□□□□ -1.63
Ubfd1-201ENSMUST00000033158 Gm11595B1AQA7 289 aa4.86□□□□□ -1.63
Ubfd1-201ENSMUST00000033158 Krtap4-8B1AQA8 209 aa4.86□□□□□ -1.63
Ubfd1-201ENSMUST00000033158 Krtap4-9B1AQA9 244 aa4.86□□□□□ -1.63
Ubfd1-201ENSMUST00000033158 2300003K06RikA2A4M0 262 aa4.85□□□□□ -1.63
Ubfd1-201ENSMUST00000033158 Gm11938Q9D3H4 131 aa4.85□□□□□ -1.63
Ubfd1-201ENSMUST00000033158 Krtap31-1Q9D644 177 aa4.84□□□□□ -1.63
Ubfd1-201ENSMUST00000033158 Muc16A0A140LJ72 8478 aa4.8□□□□□ -1.64
Ubfd1-201ENSMUST00000033158 Krtap4-7Q9D732 168 aa4.79□□□□□ -1.64
Ubfd1-201ENSMUST00000033158 Syne2Q6ZWQ0 6874 aaKnown RBP4.75□□□□□ -1.65
Ubfd1-201ENSMUST00000033158 Lce1kJ3QP15 125 aa4.74□□□□□ -1.65
Ubfd1-201ENSMUST00000033158 Krtap4-13Q9D7P3 165 aa4.72□□□□□ -1.65
Ubfd1-201ENSMUST00000033158 SspoQ8CG65 4998 aa4.63□□□□□ -1.67
Ubfd1-201ENSMUST00000033158 Mt3P28184 68 aa4.58□□□□□ -1.68
Ubfd1-201ENSMUST00000033158 Macf1Q9QXZ0 7354 aaKnown RBP4.54□□□□□ -1.68
Ubfd1-201ENSMUST00000033158 Krtap4-16Q91W93 202 aa4.44□□□□□ -1.7
Ubfd1-201ENSMUST00000033158 ObscnA2AAJ9 8891 aaKnown RBP4.4□□□□□ -1.71
Ubfd1-201ENSMUST00000033158 Lce1a1Q9CQH5 143 aa4.35□□□□□ -1.71
Ubfd1-201ENSMUST00000033158 Mt1P02802 61 aaKnown RBP4.32□□□□□ -1.72
Ubfd1-201ENSMUST00000033158 Krtap6-3A0A087WQL6 57 aa4.3□□□□□ -1.72
Ubfd1-201ENSMUST00000033158 Gm11554B1AQB2 190 aa4.23□□□□□ -1.73
Ubfd1-201ENSMUST00000033158 A0A1Y7VJH8 109 aa4.18□□□□□ -1.74
Ubfd1-201ENSMUST00000033158 Krtap20-2E9Q0A8 60 aa4.15□□□□□ -1.74
Ubfd1-201ENSMUST00000033158 DstQ91ZU6 7393 aaKnown RBP4.12□□□□□ -1.75
Ubfd1-201ENSMUST00000033158 Gm11555B1AQ89 175 aa4.06□□□□□ -1.76
Ubfd1-201ENSMUST00000033158 NebE9Q1W3 7152 aa4.03□□□□□ -1.76
Ubfd1-201ENSMUST00000033158 Krtap28-10A0A1Y7VP58 119 aa3.99□□□□□ -1.77
Ubfd1-201ENSMUST00000033158 Sprr2bO70554 98 aa3.98□□□□□ -1.77
Ubfd1-201ENSMUST00000033158 A0A1Y7VLE6 161 aa3.96□□□□□ -1.78
Ubfd1-201ENSMUST00000033158 Kmt2dQ6PDK2 5588 aa3.96□□□□□ -1.78
Ubfd1-201ENSMUST00000033158 Eppk1Q8R0W0 6548 aa3.86□□□□□ -1.79
Ubfd1-201ENSMUST00000033158 Muc19Q6PZE0 7524 aa3.86□□□□□ -1.79
Ubfd1-201ENSMUST00000033158 Gm7544A0A1Y7VJ58 118 aa3.78□□□□□ -1.8
Ubfd1-201ENSMUST00000033158 A030005L19RikA0A1Y7VIU2 113 aa3.74□□□□□ -1.81
Ubfd1-201ENSMUST00000033158 Krtap28-13A0A087WQP5 138 aa3.73□□□□□ -1.81
Ubfd1-201ENSMUST00000033158 A030005K14RikA0A1Y7VNY1 122 aa3.67□□□□□ -1.82
Ubfd1-201ENSMUST00000033158 A030003K21RikA0A1Y7VIM3 128 aa3.66□□□□□ -1.82
Ubfd1-201ENSMUST00000033158 Krtap31-2Q8CAY5 177 aa3.57□□□□□ -1.84
Ubfd1-201ENSMUST00000033158 1110025L11RikO09048 78 aa3.53□□□□□ -1.84
Ubfd1-201ENSMUST00000033158 Krtap6-5Q925H3 78 aa3.53□□□□□ -1.84
Ubfd1-201ENSMUST00000033158 Gpr98Q8VHN7 6298 aaKnown RBP3.46□□□□□ -1.86
Ubfd1-201ENSMUST00000033158 Gm6217A0A1Y7VJK9 128 aa3.45□□□□□ -1.86
Ubfd1-201ENSMUST00000033158 Gm11639A0A1D5RLM8 5808 aa3.43□□□□□ -1.86
Ubfd1-201ENSMUST00000033158 Gm11559Q9D3H7 191 aa3.35□□□□□ -1.87
Ubfd1-201ENSMUST00000033158 Gm11568A2A4M2 211 aa3.34□□□□□ -1.87
Ubfd1-201ENSMUST00000033158 Krtap9-1Q64526 186 aa3.34□□□□□ -1.87
Ubfd1-201ENSMUST00000033158 Gm10229O08631 77 aa3.32□□□□□ -1.88
Ubfd1-201ENSMUST00000033158 A0A1Y7VJ07 166 aa3.29□□□□□ -1.88
Ubfd1-201ENSMUST00000033158 Hmcn1D3YXG0 5634 aa3.21□□□□□ -1.9
Ubfd1-201ENSMUST00000033158 A0A286YCP9 139 aa3.17□□□□□ -1.9
Ubfd1-201ENSMUST00000033158 Phgr1Q8K0G7 91 aa3.09□□□□□ -1.91
Ubfd1-201ENSMUST00000033158 Krtap5-2Q9D5Z7 189 aa3.06□□□□□ -1.92
Ubfd1-201ENSMUST00000033158 A030014E15RikA0A1Y7VJV2 120 aa3.01□□□□□ -1.93
Ubfd1-201ENSMUST00000033158 Gm4553A0A1B0GSA9 284 aa2.9□□□□□ -1.95
Ubfd1-201ENSMUST00000033158 Gm2431E9Q8S1 172 aa2.78□□□□□ -1.96
Ubfd1-201ENSMUST00000033158 AhnakE9Q616 5656 aaKnown RBP2.77□□□□□ -1.97
Ubfd1-201ENSMUST00000033158 Krtap6-2O08884 159 aa2.69□□□□□ -1.98
Ubfd1-201ENSMUST00000033158 Gm10153A0A1B0GRL1 320 aa2.63□□□□□ -1.99
Ubfd1-201ENSMUST00000033158 Gm45337A0A1B0GS71 263 aa2.54□□□□□ -2
Ubfd1-201ENSMUST00000033158 Krtap21-1Q925H4 128 aa2.52□□□□□ -2.01
Ubfd1-201ENSMUST00000033158 Gm40460A0A1B0GR10 244 aa2.47□□□□□ -2.01
Ubfd1-201ENSMUST00000033158 Gm7579A0A1B0GRJ4 243 aa2.47□□□□□ -2.01
Ubfd1-201ENSMUST00000033158 Krtap5-5Q2TA51 241 aa2.47□□□□□ -2.01
Ubfd1-201ENSMUST00000033158 Krtap5-4Q62220 223 aa2.47□□□□□ -2.01
Ubfd1-201ENSMUST00000033158 Gm39115A0A1B0GSH7 232 aa2.34□□□□□ -2.03
Ubfd1-201ENSMUST00000033158 Gm45618A0A1B0GSA0 219 aa2.18□□□□□ -2.06
Ubfd1-201ENSMUST00000033158 Gm11567Q9D141 195 aa2.14□□□□□ -2.07
Ubfd1-201ENSMUST00000033158 Gm29735A0A1B0GT06 219 aa1.83□□□□□ -2.12
Ubfd1-201ENSMUST00000033158 Krtap5-1Q64507 230 aa1.57□□□□□ -2.16
Ubfd1-201ENSMUST00000033158 Gm4559A4IF42 199 aa1.48□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 12.9 ms