RNA–Protein interactions for RNA: ENSMUST00000028224.14

Gapvd1-201, Transcript of GTPase-activating protein and VPS9 domain-containing protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gapvd1, Length 5,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gapvd1-201ENSMUST00000028224 Fat4Q2PZL6 4981 aa5,35□□□□□ -1,55
Gapvd1-201ENSMUST00000028224 2300003K06RikA2A4M0 262 aa5,35□□□□□ -1,55
Gapvd1-201ENSMUST00000028224 Gm11596B1AQB0 205 aa5,32□□□□□ -1,56
Gapvd1-201ENSMUST00000028224 Gm11564A2A4L9 201 aa5,32□□□□□ -1,56
Gapvd1-201ENSMUST00000028224 Gm11563B1AQ90 168 aa5,32□□□□□ -1,56
Gapvd1-201ENSMUST00000028224 Gm11595B1AQA7 289 aa5,32□□□□□ -1,56
Gapvd1-201ENSMUST00000028224 Krtap4-8B1AQA8 209 aa5,32□□□□□ -1,56
Gapvd1-201ENSMUST00000028224 Krtap4-9B1AQA9 244 aa5,3□□□□□ -1,56
Gapvd1-201ENSMUST00000028224 Krtap4-7Q9D732 168 aa5,29□□□□□ -1,56
Gapvd1-201ENSMUST00000028224 ZanO88799 5376 aa5,29□□□□□ -1,56
Gapvd1-201ENSMUST00000028224 Abca13Q5SSE9 5034 aa5,28□□□□□ -1,56
Gapvd1-201ENSMUST00000028224 Krtap17-1A2A5X6 109 aa5,28□□□□□ -1,56
Gapvd1-201ENSMUST00000028224 Gm11938Q9D3H4 131 aa5,27□□□□□ -1,57
Gapvd1-201ENSMUST00000028224 Hmcn2A2AJ76 5100 aa5,22□□□□□ -1,57
Gapvd1-201ENSMUST00000028224 Muc5bE9Q5I3 4800 aa5,22□□□□□ -1,57
Gapvd1-201ENSMUST00000028224 Lce1kJ3QP15 125 aa5,22□□□□□ -1,57
Gapvd1-201ENSMUST00000028224 Krtap4-13Q9D7P3 165 aa5,17□□□□□ -1,58
Gapvd1-201ENSMUST00000028224 Mt3P28184 68 aa5,11□□□□□ -1,59
Gapvd1-201ENSMUST00000028224 Rnf213E9Q555 5152 aaKnown RBP5,06□□□□□ -1,6
Gapvd1-201ENSMUST00000028224 Fsip2A2ARZ3 6995 aa5,02□□□□□ -1,61
Gapvd1-201ENSMUST00000028224 Krtap4-16Q91W93 202 aa4,98□□□□□ -1,61
Gapvd1-201ENSMUST00000028224 Syne2Q6ZWQ0 6874 aaKnown RBP4,9□□□□□ -1,62
Gapvd1-201ENSMUST00000028224 Ush2AQ2QI47 5193 aa4,89□□□□□ -1,63
Gapvd1-201ENSMUST00000028224 Lce1a1Q9CQH5 143 aa4,81□□□□□ -1,64
Gapvd1-201ENSMUST00000028224 SspoQ8CG65 4998 aa4,74□□□□□ -1,65
Gapvd1-201ENSMUST00000028224 Krtap6-3A0A087WQL6 57 aa4,71□□□□□ -1,66
Gapvd1-201ENSMUST00000028224 Mt1P02802 61 aaKnown RBP4,69□□□□□ -1,66
Gapvd1-201ENSMUST00000028224 Gm11554B1AQB2 190 aa4,68□□□□□ -1,66
Gapvd1-201ENSMUST00000028224 Muc16A0A140LJ72 8478 aa4,65□□□□□ -1,66
Gapvd1-201ENSMUST00000028224 Sprr2bO70554 98 aa4,61□□□□□ -1,67
Gapvd1-201ENSMUST00000028224 ObscnA2AAJ9 8891 aaKnown RBP4,52□□□□□ -1,69
Gapvd1-201ENSMUST00000028224 Krtap20-2E9Q0A8 60 aa4,5□□□□□ -1,69
Gapvd1-201ENSMUST00000028224 Krtap31-2Q8CAY5 177 aa4,44□□□□□ -1,7
Gapvd1-201ENSMUST00000028224 Macf1Q9QXZ0 7354 aaKnown RBP4,14□□□□□ -1,75
Gapvd1-201ENSMUST00000028224 Eppk1Q8R0W0 6548 aa4,11□□□□□ -1,75
Gapvd1-201ENSMUST00000028224 Kmt2dQ6PDK2 5588 aa4,11□□□□□ -1,75
Gapvd1-201ENSMUST00000028224 DstQ91ZU6 7393 aaKnown RBP4,04□□□□□ -1,76
Gapvd1-201ENSMUST00000028224 NebE9Q1W3 7152 aa4□□□□□ -1,77
Gapvd1-201ENSMUST00000028224 Gm11555B1AQ89 175 aa3,92□□□□□ -1,78
Gapvd1-201ENSMUST00000028224 1110025L11RikO09048 78 aa3,87□□□□□ -1,79
Gapvd1-201ENSMUST00000028224 Krtap6-5Q925H3 78 aa3,87□□□□□ -1,79
Gapvd1-201ENSMUST00000028224 Muc19Q6PZE0 7524 aa3,7□□□□□ -1,82
Gapvd1-201ENSMUST00000028224 Gm10229O08631 77 aa3,67□□□□□ -1,82
Gapvd1-201ENSMUST00000028224 Gm11559Q9D3H7 191 aa3,54□□□□□ -1,84
Gapvd1-201ENSMUST00000028224 Gm11568A2A4M2 211 aa3,52□□□□□ -1,85
Gapvd1-201ENSMUST00000028224 Krtap9-1Q64526 186 aa3,52□□□□□ -1,85
Gapvd1-201ENSMUST00000028224 Phgr1Q8K0G7 91 aa3,48□□□□□ -1,85
Gapvd1-201ENSMUST00000028224 Gm11639A0A1D5RLM8 5808 aa3,42□□□□□ -1,86
Gapvd1-201ENSMUST00000028224 Gpr98Q8VHN7 6298 aaKnown RBP3,25□□□□□ -1,89
Gapvd1-201ENSMUST00000028224 Krtap5-2Q9D5Z7 189 aa3,07□□□□□ -1,92
Gapvd1-201ENSMUST00000028224 Hmcn1D3YXG0 5634 aa3,07□□□□□ -1,92
Gapvd1-201ENSMUST00000028224 Krtap6-2O08884 159 aa2,94□□□□□ -1,94
Gapvd1-201ENSMUST00000028224 Gm4553A0A1B0GSA9 284 aa2,88□□□□□ -1,95
Gapvd1-201ENSMUST00000028224 Gm11567Q9D141 195 aa2,75□□□□□ -1,97
Gapvd1-201ENSMUST00000028224 AhnakE9Q616 5656 aaKnown RBP2,73□□□□□ -1,97
Gapvd1-201ENSMUST00000028224 Gm2431E9Q8S1 172 aa2,71□□□□□ -1,98
Gapvd1-201ENSMUST00000028224 Krtap21-1Q925H4 128 aa2,71□□□□□ -1,98
Gapvd1-201ENSMUST00000028224 Gm10153A0A1B0GRL1 320 aa2,58□□□□□ -2
Gapvd1-201ENSMUST00000028224 A030005L19RikA0A1Y7VIU2 113 aa2,53□□□□□ -2
Gapvd1-201ENSMUST00000028224 Gm45337A0A1B0GS71 263 aa2,43□□□□□ -2,02
Gapvd1-201ENSMUST00000028224 Gm40460A0A1B0GR10 244 aa2,41□□□□□ -2,02
Gapvd1-201ENSMUST00000028224 Gm7579A0A1B0GRJ4 243 aa2,41□□□□□ -2,02
Gapvd1-201ENSMUST00000028224 Krtap5-5Q2TA51 241 aa2,41□□□□□ -2,02
Gapvd1-201ENSMUST00000028224 Krtap5-4Q62220 223 aa2,41□□□□□ -2,02
Gapvd1-201ENSMUST00000028224 A0A1Y7VLE6 161 aa2,3□□□□□ -2,04
Gapvd1-201ENSMUST00000028224 Gm39115A0A1B0GSH7 232 aa2,2□□□□□ -2,06
Gapvd1-201ENSMUST00000028224 A0A1Y7VJH8 109 aa2,1□□□□□ -2,07
Gapvd1-201ENSMUST00000028224 Krtap28-10A0A1Y7VP58 119 aa2,1□□□□□ -2,07
Gapvd1-201ENSMUST00000028224 A030003K21RikA0A1Y7VIM3 128 aa2,07□□□□□ -2,08
Gapvd1-201ENSMUST00000028224 Krtap28-13A0A087WQP5 138 aa2□□□□□ -2,09
Gapvd1-201ENSMUST00000028224 Gm6217A0A1Y7VJK9 128 aa1,94□□□□□ -2,1
Gapvd1-201ENSMUST00000028224 A030005K14RikA0A1Y7VNY1 122 aa1,94□□□□□ -2,1
Gapvd1-201ENSMUST00000028224 Gm7544A0A1Y7VJ58 118 aa1,94□□□□□ -2,1
Gapvd1-201ENSMUST00000028224 A0A1Y7VJ07 166 aa1,91□□□□□ -2,1
Gapvd1-201ENSMUST00000028224 Gm29735A0A1B0GT06 219 aa1,82□□□□□ -2,12
Gapvd1-201ENSMUST00000028224 Gm45618A0A1B0GSA0 219 aa1,81□□□□□ -2,12
Gapvd1-201ENSMUST00000028224 A030014E15RikA0A1Y7VJV2 120 aa1,77□□□□□ -2,13
Gapvd1-201ENSMUST00000028224 Krtap5-1Q64507 230 aa1,5□□□□□ -2,17
Gapvd1-201ENSMUST00000028224 A0A286YCP9 139 aa1,46□□□□□ -2,17
Gapvd1-201ENSMUST00000028224 Gm4559A4IF42 199 aa0,93□□□□□ -2,26
Retrieved 80 of 22,080 RNA–protein pairs in 40,9 ms