RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Mt4P47945 62 aa5,17□□□□□ -1,58
Col17a1-201ENSMUST00000026045 Krtap4-6Q3V4B7 195 aa5,16□□□□□ -1,58
Col17a1-201ENSMUST00000026045 Sprr2dO70555 85 aa5,16□□□□□ -1,58
Col17a1-201ENSMUST00000026045 Sprr2hO70559 108 aa5,15□□□□□ -1,58
Col17a1-201ENSMUST00000026045 Rnf213E9Q555 5152 aaKnown RBP5,1□□□□□ -1,59
Col17a1-201ENSMUST00000026045 Krtap4-2B1AQ85 167 aa5,07□□□□□ -1,6
Col17a1-201ENSMUST00000026045 Sprr2eO70556 76 aa4,98□□□□□ -1,61
Col17a1-201ENSMUST00000026045 Krtap4-1Q3UUY3 169 aa4,96□□□□□ -1,62
Col17a1-201ENSMUST00000026045 Krtap4-16Q91W93 202 aa4,94□□□□□ -1,62
Col17a1-201ENSMUST00000026045 Muc5bE9Q5I3 4800 aa4,93□□□□□ -1,62
Col17a1-201ENSMUST00000026045 Gm11596B1AQB0 205 aa4,83□□□□□ -1,64
Col17a1-201ENSMUST00000026045 Gm11564A2A4L9 201 aa4,82□□□□□ -1,64
Col17a1-201ENSMUST00000026045 Gm11563B1AQ90 168 aa4,82□□□□□ -1,64
Col17a1-201ENSMUST00000026045 Gm11595B1AQA7 289 aa4,82□□□□□ -1,64
Col17a1-201ENSMUST00000026045 Krtap4-8B1AQA8 209 aa4,82□□□□□ -1,64
Col17a1-201ENSMUST00000026045 Gm11562A0PK51 136 aa4,8□□□□□ -1,64
Col17a1-201ENSMUST00000026045 Krtap4-9B1AQA9 244 aa4,8□□□□□ -1,64
Col17a1-201ENSMUST00000026045 Fsip2A2ARZ3 6995 aa4,79□□□□□ -1,64
Col17a1-201ENSMUST00000026045 2300003K06RikA2A4M0 262 aa4,79□□□□□ -1,64
Col17a1-201ENSMUST00000026045 SspoQ8CG65 4998 aa4,73□□□□□ -1,65
Col17a1-201ENSMUST00000026045 Krtap4-7Q9D732 168 aa4,69□□□□□ -1,66
Col17a1-201ENSMUST00000026045 Krtap4-13Q9D7P3 165 aa4,68□□□□□ -1,66
Col17a1-201ENSMUST00000026045 Lce1kJ3QP15 125 aa4,67□□□□□ -1,66
Col17a1-201ENSMUST00000026045 Muc16A0A140LJ72 8478 aa4,55□□□□□ -1,68
Col17a1-201ENSMUST00000026045 Syne2Q6ZWQ0 6874 aaKnown RBP4,55□□□□□ -1,68
Col17a1-201ENSMUST00000026045 Lce1a1Q9CQH5 143 aa4,48□□□□□ -1,69
Col17a1-201ENSMUST00000026045 Mt3P28184 68 aa4,39□□□□□ -1,71
Col17a1-201ENSMUST00000026045 Mt1P02802 61 aaKnown RBP4,25□□□□□ -1,73
Col17a1-201ENSMUST00000026045 ObscnA2AAJ9 8891 aaKnown RBP4,17□□□□□ -1,74
Col17a1-201ENSMUST00000026045 Krtap6-3A0A087WQL6 57 aa4,16□□□□□ -1,74
Col17a1-201ENSMUST00000026045 Krtap20-2E9Q0A8 60 aa4,15□□□□□ -1,75
Col17a1-201ENSMUST00000026045 Gm11554B1AQB2 190 aa4,12□□□□□ -1,75
Col17a1-201ENSMUST00000026045 Gm11555B1AQ89 175 aa3,96□□□□□ -1,77
Col17a1-201ENSMUST00000026045 Macf1Q9QXZ0 7354 aaKnown RBP3,96□□□□□ -1,78
Col17a1-201ENSMUST00000026045 Sprr2bO70554 98 aa3,92□□□□□ -1,78
Col17a1-201ENSMUST00000026045 DstQ91ZU6 7393 aaKnown RBP3,68□□□□□ -1,82
Col17a1-201ENSMUST00000026045 Eppk1Q8R0W0 6548 aa3,66□□□□□ -1,82
Col17a1-201ENSMUST00000026045 Kmt2dQ6PDK2 5588 aa3,62□□□□□ -1,83
Col17a1-201ENSMUST00000026045 Muc19Q6PZE0 7524 aa3,59□□□□□ -1,83
Col17a1-201ENSMUST00000026045 NebE9Q1W3 7152 aa3,59□□□□□ -1,84
Col17a1-201ENSMUST00000026045 Gm11568A2A4M2 211 aa3,52□□□□□ -1,85
Col17a1-201ENSMUST00000026045 Krtap9-1Q64526 186 aa3,52□□□□□ -1,85
Col17a1-201ENSMUST00000026045 1110025L11RikO09048 78 aa3,46□□□□□ -1,86
Col17a1-201ENSMUST00000026045 Krtap6-5Q925H3 78 aa3,46□□□□□ -1,86
Col17a1-201ENSMUST00000026045 Gm11559Q9D3H7 191 aa3,34□□□□□ -1,87
Col17a1-201ENSMUST00000026045 Phgr1Q8K0G7 91 aa3,28□□□□□ -1,88
Col17a1-201ENSMUST00000026045 Gm10229O08631 77 aa3,22□□□□□ -1,89
Col17a1-201ENSMUST00000026045 Krtap5-2Q9D5Z7 189 aa3,15□□□□□ -1,91
Col17a1-201ENSMUST00000026045 Hmcn1D3YXG0 5634 aa3,05□□□□□ -1,92
Col17a1-201ENSMUST00000026045 Gm11639A0A1D5RLM8 5808 aa2,99□□□□□ -1,93
Col17a1-201ENSMUST00000026045 Gpr98Q8VHN7 6298 aaKnown RBP2,95□□□□□ -1,94
Col17a1-201ENSMUST00000026045 Gm4553A0A1B0GSA9 284 aa2,92□□□□□ -1,94
Col17a1-201ENSMUST00000026045 Gm11567Q9D141 195 aa2,91□□□□□ -1,94
Col17a1-201ENSMUST00000026045 Gm10153A0A1B0GRL1 320 aa2,82□□□□□ -1,96
Col17a1-201ENSMUST00000026045 Gm2431E9Q8S1 172 aa2,8□□□□□ -1,96
Col17a1-201ENSMUST00000026045 AhnakE9Q616 5656 aaKnown RBP2,65□□□□□ -1,98
Col17a1-201ENSMUST00000026045 Gm45337A0A1B0GS71 263 aa2,62□□□□□ -1,99
Col17a1-201ENSMUST00000026045 Krtap6-2O08884 159 aa2,62□□□□□ -1,99
Col17a1-201ENSMUST00000026045 A0A1Y7VJH8 109 aa2,59□□□□□ -1,99
Col17a1-201ENSMUST00000026045 Gm40460A0A1B0GR10 244 aa2,57□□□□□ -2
Col17a1-201ENSMUST00000026045 Gm7579A0A1B0GRJ4 243 aa2,57□□□□□ -2
Col17a1-201ENSMUST00000026045 Krtap5-5Q2TA51 241 aa2,57□□□□□ -2
Col17a1-201ENSMUST00000026045 Krtap5-4Q62220 223 aa2,57□□□□□ -2
Col17a1-201ENSMUST00000026045 Krtap21-1Q925H4 128 aa2,55□□□□□ -2
Col17a1-201ENSMUST00000026045 A030005L19RikA0A1Y7VIU2 113 aa2,52□□□□□ -2,01
Col17a1-201ENSMUST00000026045 Gm39115A0A1B0GSH7 232 aa2,35□□□□□ -2,03
Col17a1-201ENSMUST00000026045 A0A1Y7VLE6 161 aa2,23□□□□□ -2,05
Col17a1-201ENSMUST00000026045 Gm29735A0A1B0GT06 219 aa1,93□□□□□ -2,1
Col17a1-201ENSMUST00000026045 Gm45618A0A1B0GSA0 219 aa1,93□□□□□ -2,1
Col17a1-201ENSMUST00000026045 Krtap28-10A0A1Y7VP58 119 aa1,85□□□□□ -2,11
Col17a1-201ENSMUST00000026045 A030003K21RikA0A1Y7VIM3 128 aa1,7□□□□□ -2,14
Col17a1-201ENSMUST00000026045 Gm6217A0A1Y7VJK9 128 aa1,63□□□□□ -2,15
Col17a1-201ENSMUST00000026045 A0A1Y7VJ07 166 aa1,62□□□□□ -2,15
Col17a1-201ENSMUST00000026045 A0A286YCP9 139 aa1,5□□□□□ -2,17
Col17a1-201ENSMUST00000026045 A030005K14RikA0A1Y7VNY1 122 aa1,45□□□□□ -2,18
Col17a1-201ENSMUST00000026045 Krtap5-1Q64507 230 aa1,44□□□□□ -2,18
Col17a1-201ENSMUST00000026045 A030014E15RikA0A1Y7VJV2 120 aa1,44□□□□□ -2,18
Col17a1-201ENSMUST00000026045 Gm7544A0A1Y7VJ58 118 aa1,34□□□□□ -2,2
Col17a1-201ENSMUST00000026045 Krtap28-13A0A087WQP5 138 aa1,31□□□□□ -2,2
Col17a1-201ENSMUST00000026045 Gm4559A4IF42 199 aa1,01□□□□□ -2,25
Retrieved 80 of 22,080 RNA–protein pairs in 35,3 ms