RNA–Protein interactions for RNA: ENSMUST00000022471.11

Pbrm1-201, Transcript of Protein polybromo-1, mousemouse

TSL 5 BASIC

Gene Pbrm1, Length 5,871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1-201ENSMUST00000022471 Krtap4-13Q9D7P3 165 aa2.04□□□□□ -2.08
Pbrm1-201ENSMUST00000022471 Krtap19-2Q925I0 141 aa2.04□□□□□ -2.08
Pbrm1-201ENSMUST00000022471 Rnf213E9Q555 5152 aaKnown RBP2.03□□□□□ -2.08
Pbrm1-201ENSMUST00000022471 Gm39115A0A1B0GSH7 232 aa2.03□□□□□ -2.08
Pbrm1-201ENSMUST00000022471 Gm19668J3QMD1 248 aa2.03□□□□□ -2.08
Pbrm1-201ENSMUST00000022471 Sprr2iO70560 76 aa2.02□□□□□ -2.09
Pbrm1-201ENSMUST00000022471 2300003K06RikA2A4M0 262 aa2□□□□□ -2.09
Pbrm1-201ENSMUST00000022471 Sprr2fO70557 76 aa1.99□□□□□ -2.09
Pbrm1-201ENSMUST00000022471 Gm29735A0A1B0GT06 219 aa1.97□□□□□ -2.09
Pbrm1-201ENSMUST00000022471 Lce1bQ9D149 137 aa1.95□□□□□ -2.1
Pbrm1-201ENSMUST00000022471 Krtap22-2J3QNX6 67 aa1.95□□□□□ -2.1
Pbrm1-201ENSMUST00000022471 Mdn1A2ANY6 5589 aaKnown RBP1.94□□□□□ -2.1
Pbrm1-201ENSMUST00000022471 Gm10153A0A1B0GRL1 320 aa1.93□□□□□ -2.1
Pbrm1-201ENSMUST00000022471 Gm40193A0A1B0GT39 78 aa1.92□□□□□ -2.1
Pbrm1-201ENSMUST00000022471 Gm17402F6Z0L5 76 aa1.91□□□□□ -2.1
Pbrm1-201ENSMUST00000022471 Krtap5-2Q9D5Z7 189 aa1.91□□□□□ -2.1
Pbrm1-201ENSMUST00000022471 Gm11554B1AQB2 190 aa1.9□□□□□ -2.11
Pbrm1-201ENSMUST00000022471 Krtap3-1A2A591 98 aa1.9□□□□□ -2.11
Pbrm1-201ENSMUST00000022471 Mt2P02798 61 aa1.9□□□□□ -2.11
Pbrm1-201ENSMUST00000022471 Gpr98Q8VHN7 6298 aaKnown RBP1.84□□□□□ -2.11
Pbrm1-201ENSMUST00000022471 Lce3bQ9CQM7 98 aa1.81□□□□□ -2.12
Pbrm1-201ENSMUST00000022471 Krtap19-4Q925H7 84 aa1.79□□□□□ -2.12
Pbrm1-201ENSMUST00000022471 Krtap19-9bQ99NG9 58 aa1.77□□□□□ -2.13
Pbrm1-201ENSMUST00000022471 Krtap7-1Q9D3I6 87 aa1.77□□□□□ -2.13
Pbrm1-201ENSMUST00000022471 Gm11559Q9D3H7 191 aa1.75□□□□□ -2.13
Pbrm1-201ENSMUST00000022471 Sprr2a3Q4KL71 83 aa1.75□□□□□ -2.13
Pbrm1-201ENSMUST00000022471 Sprr2a1Q9CQK8 83 aa1.75□□□□□ -2.13
Pbrm1-201ENSMUST00000022471 Lce1dQ9D731 133 aa1.73□□□□□ -2.13
Pbrm1-201ENSMUST00000022471 Gm11639A0A1D5RLM8 5808 aa1.72□□□□□ -2.13
Pbrm1-201ENSMUST00000022471 Lce1fB9EJP6 147 aa1.72□□□□□ -2.13
Pbrm1-201ENSMUST00000022471 Lce1cQ9D1C5 147 aa1.72□□□□□ -2.13
Pbrm1-201ENSMUST00000022471 Krtap5-4Q62220 223 aa1.71□□□□□ -2.13
Pbrm1-201ENSMUST00000022471 Lce3cQ91V05 98 aa1.71□□□□□ -2.14
Pbrm1-201ENSMUST00000022471 Lce1iQ9D6P5 149 aa1.71□□□□□ -2.14
Pbrm1-201ENSMUST00000022471 Sprr2eO70556 76 aa1.71□□□□□ -2.14
Pbrm1-201ENSMUST00000022471 Krtap5-1Q64507 230 aa1.69□□□□□ -2.14
Pbrm1-201ENSMUST00000022471 Krtap4-16Q91W93 202 aa1.68□□□□□ -2.14
Pbrm1-201ENSMUST00000022471 Fsip2A2ARZ3 6995 aa1.68□□□□□ -2.14
Pbrm1-201ENSMUST00000022471 Sprr2hO70559 108 aa1.67□□□□□ -2.14
Pbrm1-201ENSMUST00000022471 Lce1kJ3QP15 125 aa1.66□□□□□ -2.14
Pbrm1-201ENSMUST00000022471 Gm4553A0A1B0GSA9 284 aa1.65□□□□□ -2.14
Pbrm1-201ENSMUST00000022471 Kmt2dQ6PDK2 5588 aa1.63□□□□□ -2.15
Pbrm1-201ENSMUST00000022471 Krtap31-2Q8CAY5 177 aa1.62□□□□□ -2.15
Pbrm1-201ENSMUST00000022471 Gm11938Q9D3H4 131 aa1.62□□□□□ -2.15
Pbrm1-201ENSMUST00000022471 Lce3dE9Q8V1 98 aa1.61□□□□□ -2.15
Pbrm1-201ENSMUST00000022471 Krtap9-1Q64526 186 aa1.61□□□□□ -2.15
Pbrm1-201ENSMUST00000022471 Hmcn1D3YXG0 5634 aa1.6□□□□□ -2.15
Pbrm1-201ENSMUST00000022471 Lce3eF8VQJ0 98 aa1.59□□□□□ -2.16
Pbrm1-201ENSMUST00000022471 Lce3fQ6PAI4 98 aa1.59□□□□□ -2.16
Pbrm1-201ENSMUST00000022471 Mt3P28184 68 aa1.58□□□□□ -2.16
Pbrm1-201ENSMUST00000022471 Gm10272F7CZ33 110 aa1.57□□□□□ -2.16
Pbrm1-201ENSMUST00000022471 Lce3aQ497I5 98 aa1.55□□□□□ -2.16
Pbrm1-201ENSMUST00000022471 Lce1a2Q9D1K4 149 aa1.54□□□□□ -2.16
Pbrm1-201ENSMUST00000022471 DstQ91ZU6 7393 aaKnown RBP1.52□□□□□ -2.17
Pbrm1-201ENSMUST00000022471 Krtap31-1Q9D644 177 aa1.51□□□□□ -2.17
Pbrm1-201ENSMUST00000022471 Sprr2bO70554 98 aa1.51□□□□□ -2.17
Pbrm1-201ENSMUST00000022471 Syne1Q6ZWR6 8799 aa1.49□□□□□ -2.17
Pbrm1-201ENSMUST00000022471 Macf1Q9QXZ0 7354 aaKnown RBP1.49□□□□□ -2.17
Pbrm1-201ENSMUST00000022471 NebE9Q1W3 7152 aa1.48□□□□□ -2.17
Pbrm1-201ENSMUST00000022471 Gm10100J3QK64 120 aa1.46□□□□□ -2.18
Pbrm1-201ENSMUST00000022471 Gm10024A0A0A0MQA4 119 aa1.44□□□□□ -2.18
Pbrm1-201ENSMUST00000022471 Gm40460A0A1B0GR10 244 aa1.43□□□□□ -2.18
Pbrm1-201ENSMUST00000022471 Gm7579A0A1B0GRJ4 243 aa1.43□□□□□ -2.18
Pbrm1-201ENSMUST00000022471 Krtap5-5Q2TA51 241 aa1.43□□□□□ -2.18
Pbrm1-201ENSMUST00000022471 Mt1P02802 61 aaKnown RBP1.42□□□□□ -2.18
Pbrm1-201ENSMUST00000022471 Gm11568A2A4M2 211 aa1.42□□□□□ -2.18
Pbrm1-201ENSMUST00000022471 Sprr2dO70555 85 aa1.41□□□□□ -2.18
Pbrm1-201ENSMUST00000022471 Muc16A0A140LJ72 8478 aa1.41□□□□□ -2.18
Pbrm1-201ENSMUST00000022471 Gm10142J3KMP7 120 aa1.35□□□□□ -2.19
Pbrm1-201ENSMUST00000022471 AhnakE9Q616 5656 aaKnown RBP1.35□□□□□ -2.19
Pbrm1-201ENSMUST00000022471 ObscnA2AAJ9 8891 aaKnown RBP1.28□□□□□ -2.2
Pbrm1-201ENSMUST00000022471 Gm4559A4IF42 199 aa1.23□□□□□ -2.21
Pbrm1-201ENSMUST00000022471 Muc19Q6PZE0 7524 aa1.13□□□□□ -2.23
Pbrm1-201ENSMUST00000022471 1110025L11RikO09048 78 aa1.05□□□□□ -2.24
Pbrm1-201ENSMUST00000022471 Krtap6-5Q925H3 78 aa1.05□□□□□ -2.24
Pbrm1-201ENSMUST00000022471 Gm11567Q9D141 195 aa1.02□□□□□ -2.25
Pbrm1-201ENSMUST00000022471 Gm10229O08631 77 aa1□□□□□ -2.25
Pbrm1-201ENSMUST00000022471 Krtap6-2O08884 159 aa0.87□□□□□ -2.27
Pbrm1-201ENSMUST00000022471 Phgr1Q8K0G7 91 aa0.86□□□□□ -2.27
Pbrm1-201ENSMUST00000022471 Krtap21-1Q925H4 128 aa0.75□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 478.8 ms