RNA–Protein interactions for RNA: ENSMUST00000021043.4

Ccl1-201, Transcript of C-C motif chemokine 1, mousemouse

TSL 1 (best) BASIC

Gene Ccl1, Length 611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1-201ENSMUST00000021043 Ndufs5Q99LY9 106 aa4.33□□□□□ -1.72
Ccl1-201ENSMUST00000021043 2310046K23RikA0A0A6YVW6 87 aa4.3□□□□□ -1.72
Ccl1-201ENSMUST00000021043 Gm12216A0A1W2P827 62 aa4.3□□□□□ -1.72
Ccl1-201ENSMUST00000021043 4933415A04RikQ9D443 101 aa4.28□□□□□ -1.72
Ccl1-201ENSMUST00000021043 Lce1eQ9D139 143 aa4.27□□□□□ -1.73
Ccl1-201ENSMUST00000021043 Sprr2iO70560 76 aa4.21□□□□□ -1.74
Ccl1-201ENSMUST00000021043 Romo1P60603 79 aa4.21□□□□□ -1.74
Ccl1-201ENSMUST00000021043 Krtap7-1Q9D3I6 87 aa4.2□□□□□ -1.74
Ccl1-201ENSMUST00000021043 Gm6217A0A1Y7VJK9 128 aa4.19□□□□□ -1.74
Ccl1-201ENSMUST00000021043 Lce1kJ3QP15 125 aa4.19□□□□□ -1.74
Ccl1-201ENSMUST00000021043 Krtap5-2Q9D5Z7 189 aa4.18□□□□□ -1.74
Ccl1-201ENSMUST00000021043 Gm10272F7CZ33 110 aa4.15□□□□□ -1.75
Ccl1-201ENSMUST00000021043 Gm3646F6S692 53 aa4.13□□□□□ -1.75
Ccl1-201ENSMUST00000021043 Lce3bQ9CQM7 98 aa4.13□□□□□ -1.75
Ccl1-201ENSMUST00000021043 Gm11559Q9D3H7 191 aa4.09□□□□□ -1.75
Ccl1-201ENSMUST00000021043 Syne1Q6ZWR6 8799 aa4.07□□□□□ -1.76
Ccl1-201ENSMUST00000021043 Gm11568A2A4M2 211 aa4.05□□□□□ -1.76
Ccl1-201ENSMUST00000021043 Krtap9-1Q64526 186 aa4.05□□□□□ -1.76
Ccl1-201ENSMUST00000021043 Gm11554B1AQB2 190 aa4.02□□□□□ -1.77
Ccl1-201ENSMUST00000021043 Gm4553A0A1B0GSA9 284 aa3.97□□□□□ -1.77
Ccl1-201ENSMUST00000021043 Eppk1Q8R0W0 6548 aa3.95□□□□□ -1.78
Ccl1-201ENSMUST00000021043 Lce1fB9EJP6 147 aa3.95□□□□□ -1.78
Ccl1-201ENSMUST00000021043 Tnp1P10856 55 aa3.95□□□□□ -1.78
Ccl1-201ENSMUST00000021043 Lce1cQ9D1C5 147 aa3.95□□□□□ -1.78
Ccl1-201ENSMUST00000021043 Gm10337F7DEP7 55 aa3.88□□□□□ -1.79
Ccl1-201ENSMUST00000021043 Kmt2dQ6PDK2 5588 aa3.86□□□□□ -1.79
Ccl1-201ENSMUST00000021043 Gm2431E9Q8S1 172 aa3.86□□□□□ -1.79
Ccl1-201ENSMUST00000021043 Gm11938Q9D3H4 131 aa3.83□□□□□ -1.8
Ccl1-201ENSMUST00000021043 Gm45337A0A1B0GS71 263 aa3.82□□□□□ -1.8
Ccl1-201ENSMUST00000021043 Gm40193A0A1B0GT39 78 aa3.81□□□□□ -1.8
Ccl1-201ENSMUST00000021043 Mt1P02802 61 aaKnown RBP3.79□□□□□ -1.8
Ccl1-201ENSMUST00000021043 Macf1Q9QXZ0 7354 aaKnown RBP3.79□□□□□ -1.8
Ccl1-201ENSMUST00000021043 Krtap19-4Q925H7 84 aa3.76□□□□□ -1.81
Ccl1-201ENSMUST00000021043 Gm10153A0A1B0GRL1 320 aa3.75□□□□□ -1.81
Ccl1-201ENSMUST00000021043 A0A286YCP9 139 aa3.72□□□□□ -1.81
Ccl1-201ENSMUST00000021043 Lce3cQ91V05 98 aa3.72□□□□□ -1.81
Ccl1-201ENSMUST00000021043 Gm40460A0A1B0GR10 244 aa3.68□□□□□ -1.82
Ccl1-201ENSMUST00000021043 Gm7579A0A1B0GRJ4 243 aa3.68□□□□□ -1.82
Ccl1-201ENSMUST00000021043 Krtap5-5Q2TA51 241 aa3.68□□□□□ -1.82
Ccl1-201ENSMUST00000021043 Krtap5-4Q62220 223 aa3.68□□□□□ -1.82
Ccl1-201ENSMUST00000021043 Lce3dE9Q8V1 98 aa3.66□□□□□ -1.82
Ccl1-201ENSMUST00000021043 Gm11639A0A1D5RLM8 5808 aa3.65□□□□□ -1.83
Ccl1-201ENSMUST00000021043 Hmcn1D3YXG0 5634 aa3.61□□□□□ -1.83
Ccl1-201ENSMUST00000021043 Gm39115A0A1B0GSH7 232 aa3.6□□□□□ -1.83
Ccl1-201ENSMUST00000021043 Lce3eF8VQJ0 98 aa3.56□□□□□ -1.84
Ccl1-201ENSMUST00000021043 Lce3fQ6PAI4 98 aa3.56□□□□□ -1.84
Ccl1-201ENSMUST00000021043 Muc19Q6PZE0 7524 aa3.53□□□□□ -1.84
Ccl1-201ENSMUST00000021043 Mt3P28184 68 aa3.51□□□□□ -1.85
Ccl1-201ENSMUST00000021043 Gm10100J3QK64 120 aa3.5□□□□□ -1.85
Ccl1-201ENSMUST00000021043 Gpr98Q8VHN7 6298 aaKnown RBP3.48□□□□□ -1.85
Ccl1-201ENSMUST00000021043 ObscnA2AAJ9 8891 aaKnown RBP3.48□□□□□ -1.85
Ccl1-201ENSMUST00000021043 4933428G20RikQ9D3X4 101 aa3.45□□□□□ -1.86
Ccl1-201ENSMUST00000021043 Sprr2dO70555 85 aa3.42□□□□□ -1.86
Ccl1-201ENSMUST00000021043 Mp68P56379 58 aa3.42□□□□□ -1.86
Ccl1-201ENSMUST00000021043 Lce3aQ497I5 98 aa3.4□□□□□ -1.87
Ccl1-201ENSMUST00000021043 Sprr2fO70557 76 aa3.39□□□□□ -1.87
Ccl1-201ENSMUST00000021043 Krtap4-16Q91W93 202 aa3.39□□□□□ -1.87
Ccl1-201ENSMUST00000021043 DstQ91ZU6 7393 aaKnown RBP3.38□□□□□ -1.87
Ccl1-201ENSMUST00000021043 Gm20538F6Z9R1 75 aa3.38□□□□□ -1.87
Ccl1-201ENSMUST00000021043 Gm45618A0A1B0GSA0 219 aa3.34□□□□□ -1.87
Ccl1-201ENSMUST00000021043 NebE9Q1W3 7152 aa3.24□□□□□ -1.89
Ccl1-201ENSMUST00000021043 AhnakE9Q616 5656 aaKnown RBP3.23□□□□□ -1.89
Ccl1-201ENSMUST00000021043 Gm10142J3KMP7 120 aa3.19□□□□□ -1.9
Ccl1-201ENSMUST00000021043 Sprr2eO70556 76 aa3.12□□□□□ -1.91
Ccl1-201ENSMUST00000021043 Gm10024A0A0A0MQA4 119 aa3□□□□□ -1.93
Ccl1-201ENSMUST00000021043 Gm29735A0A1B0GT06 219 aa2.97□□□□□ -1.93
Ccl1-201ENSMUST00000021043 Sprr2hO70559 108 aa2.95□□□□□ -1.94
Ccl1-201ENSMUST00000021043 Gm11567Q9D141 195 aa2.88□□□□□ -1.95
Ccl1-201ENSMUST00000021043 Ndufaf8A2AMZ4 74 aa2.86□□□□□ -1.95
Ccl1-201ENSMUST00000021043 Gm9112A2AI92 75 aa2.83□□□□□ -1.96
Ccl1-201ENSMUST00000021043 1110025L11RikO09048 78 aa2.73□□□□□ -1.97
Ccl1-201ENSMUST00000021043 Krtap6-5Q925H3 78 aa2.73□□□□□ -1.97
Ccl1-201ENSMUST00000021043 Muc16A0A140LJ72 8478 aa2.64□□□□□ -1.99
Ccl1-201ENSMUST00000021043 Gm10229O08631 77 aa2.46□□□□□ -2.02
Ccl1-201ENSMUST00000021043 Krtap21-1Q925H4 128 aa2.2□□□□□ -2.06
Ccl1-201ENSMUST00000021043 Krtap6-2O08884 159 aa2.17□□□□□ -2.06
Ccl1-201ENSMUST00000021043 Sprr2bO70554 98 aa2.16□□□□□ -2.06
Ccl1-201ENSMUST00000021043 Krtap5-1Q64507 230 aa2.1□□□□□ -2.07
Ccl1-201ENSMUST00000021043 Gm4559A4IF42 199 aa2.07□□□□□ -2.08
Ccl1-201ENSMUST00000021043 Phgr1Q8K0G7 91 aa1.78□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 82.9 ms