RNA–Protein interactions for RNA: ENST00000636667.1

UBE3A-225, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 5,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-225ENST00000636667 LRFN4Q6PJG9 635 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 GAREM2Q75VX8 874 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 DDX46Q7L014 1031 aaKnown RBP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 KIAA0907Q7Z7F0 614 aaPredicted RBP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 VWCEQ96DN2 955 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 SLC39A13Q96H72 371 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 CLUHP3Q96NS8 147 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 DNAJC7Q99615 494 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 PRRX2Q99811 253 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 PBX4Q9BYU1 374 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 NUCKS1Q9H1E3 243 aaKnown RBP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 FBRSQ9HAH7 460 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 RAB11FIP3O75154 756 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 KRT37O76014 449 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 GDF11O95390 407 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 GJB6O95452 261 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 CDKN1CP49918 316 aaPredicted RBP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 IFT88Q13099 833 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 SF3A1Q15459 793 aaKnown RBP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 DDR2Q16832 855 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 FOXD4L6Q3SYB3 417 aaPredicted RBP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 FOXD4L3Q6VB84 417 aaPredicted RBP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 SH3TC2Q8TF17 1288 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 AMBRA1Q9C0C7 1298 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 ADAM19Q9H013 955 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 EHMT1Q9H9B1 1298 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 C11orf16Q9NQ32 467 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 DNAJB12Q9NXW2 375 aaKnown RBP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 LOC102724428A0A0B4J2F2 783 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 RNF225M0QZC1 329 aaPredicted RBP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 DDX3YO15523 660 aaKnown RBP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 ARAFP10398 606 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 ATP2B1P20020 1258 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 SIK1P57059 783 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 ANTXR2P58335 489 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 EMC10Q5UCC4 262 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 TMEM151AQ8N4L1 468 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 TMOD3Q9NYL9 352 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.94□□□□□ -2.1
UBE3A-225ENST00000636667 U3KQE9 123 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 CENPFP49454 3210 aa1.94□□□□□ -2.1
UBE3A-225ENST00000636667 TRIOBPQ9H2D6 2365 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 K7ELQ4 463 aaPredicted RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 ARHGAP6O43182 974 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 ALBP02768 609 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 GBP2P32456 591 aaPredicted RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 ECE1P42892 770 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 ATP2B2Q01814 1243 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 PPP2R5DQ14738 602 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 NKG7Q16617 165 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 LHFPL2Q6ZUX7 228 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 JAMLQ86YT9 394 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 CCDC86Q9H6F5 360 aaKnown RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 BCAS3Q9H6U6 928 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 TMEM260Q9NX78 707 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 KLHL42Q9P2K6 505 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 IFNA2P01563 188 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 TATP17735 454 aaPredicted RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 CEBPAP49715 358 aaPredicted RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 SEZ6Q53EL9 994 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 GLDNQ6ZMI3 551 aaPredicted RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 RBBP8NLQ8NC74 664 aaPredicted RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 AVENQ9NQS1 362 aaPredicted RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 MARK1Q9P0L2 795 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 A0A1W2PQH9 124 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 C5orf49A4QMS7 147 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 KRBA1A5PL33 1030 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 CBFA2T2O43439 604 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 OIP5O43482 229 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 ATE1O95260 518 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 HSPA1AP0DMV8 641 aaKnown RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 HSPA1BP0DMV9 641 aaKnown RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 AFF1P51825 1210 aaKnown RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 NRLP54845 237 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 APBA1Q02410 837 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 NOP9Q86U38 636 aaKnown RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 SEC16BQ96JE7 1060 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 ST7Q9NRC1 585 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 PCDHB10Q9UN67 800 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 TTF2Q9UNY4 1162 aaKnown RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 AKAP2Q9Y2D5 859 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 FRMD3A2A2Y4 597 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 MEIS3P2A8K0S8 358 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 ALX3O95076 343 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 PARNO95453 639 aaKnown RBP1.93□□□□□ -2.1
UBE3A-225ENST00000636667 ITGB7P26010 798 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 SOX10P56693 466 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 SETDB1Q15047 1291 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 SV2BQ7L1I2 683 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 PGBD3Q8N328 593 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 PPP1R13LQ8WUF5 828 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 CBX8Q9HC52 389 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 PRDM6Q9NQX0 595 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 PPM1HQ9ULR3 514 aa1.93□□□□□ -2.1
UBE3A-225ENST00000636667 C9IYK1 514 aa1.92□□□□□ -2.1
UBE3A-225ENST00000636667 PDE2AO00408 941 aaPredicted RBP1.92□□□□□ -2.1
UBE3A-225ENST00000636667 KCNQ2O43526 872 aa1.92□□□□□ -2.1
UBE3A-225ENST00000636667 NID1P14543 1247 aa1.92□□□□□ -2.1
UBE3A-225ENST00000636667 HMGB2P26583 209 aaKnown RBP1.92□□□□□ -2.1
UBE3A-225ENST00000636667 MAP2K3P46734 347 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms