RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 DHRS4Q9BTZ2 278 aa9.38□□□□□ -0.91
SMARCA2-243ENST00000635590 TRHDEQ9UKU6 1024 aa9.38□□□□□ -0.91
SMARCA2-243ENST00000635590 CUL7Q14999 1698 aa9.38□□□□□ -0.91
SMARCA2-243ENST00000635590 EPRSP07814 1512 aaKnown RBP9.37□□□□□ -0.91
SMARCA2-243ENST00000635590 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
SMARCA2-243ENST00000635590 VSTM5A8MXK1 200 aa9.37□□□□□ -0.91
SMARCA2-243ENST00000635590 GABRDO14764 452 aa9.37□□□□□ -0.91
SMARCA2-243ENST00000635590 TRPA1O75762 1119 aa9.37□□□□□ -0.91
SMARCA2-243ENST00000635590 TRIM27P14373 513 aa9.37□□□□□ -0.91
SMARCA2-243ENST00000635590 PPM1KQ8N3J5 372 aa9.37□□□□□ -0.91
SMARCA2-243ENST00000635590 EPN3Q9H201 632 aa9.37□□□□□ -0.91
SMARCA2-243ENST00000635590 LZTS1Q9Y250 596 aa9.37□□□□□ -0.91
SMARCA2-243ENST00000635590 BMP6P22004 513 aa9.36□□□□□ -0.91
SMARCA2-243ENST00000635590 TCIRG1Q13488 830 aa9.36□□□□□ -0.91
SMARCA2-243ENST00000635590 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
SMARCA2-243ENST00000635590 FAM83BQ5T0W9 1011 aa9.36□□□□□ -0.91
SMARCA2-243ENST00000635590 TIFAQ96CG3 184 aa9.36□□□□□ -0.91
SMARCA2-243ENST00000635590 CEP63Q96MT8 703 aa9.36□□□□□ -0.91
SMARCA2-243ENST00000635590 OSGEPQ9NPF4 335 aa9.36□□□□□ -0.91
SMARCA2-243ENST00000635590 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
SMARCA2-243ENST00000635590 SASH3O75995 380 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 MAPRE1Q15691 268 aaKnown RBP9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 CDC6Q99741 560 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 ZNF576Q9H609 170 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 PCDHB10Q9UN67 800 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 CARMIL1Q5VZK9 1371 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 MAP3K4Q9Y6R4 1608 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 KDM5BQ9UGL1 1544 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 LTBP3Q9NS15 1303 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 MEIS3P2A8K0S8 358 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 EXOC5O00471 708 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 MMP20O60882 483 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 PTMSP20962 102 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 DGKGP49619 791 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 ZNF157P51786 506 aaPredicted RBP9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 PUS7LQ9H0K6 701 aaKnown RBP9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 TMEM39AQ9NV64 488 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 USP25Q9UHP3 1055 aa9.35□□□□□ -0.91
SMARCA2-243ENST00000635590 TNKSO95271 1327 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 CFAP69A5D8W1 941 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 NBPF7P0C2Y1 421 aaPredicted RBP9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 GPC1P35052 558 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 PCBP1Q15365 356 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 ARSJQ5FYB0 599 aaPredicted RBP9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 RPS26P11Q5JNZ5 115 aaPredicted RBP9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 YOD1Q5VVQ6 348 aaPredicted RBP9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 PKN3Q6P5Z2 889 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 CNTD1Q8N815 330 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 SLC7A3Q8WY07 619 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 GAL3ST3Q96A11 431 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 MRPL4Q9BYD3 311 aaKnown RBP9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 ARHGEF4Q9NR80 690 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 CYP8B1Q9UNU6 501 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 SLC12A7Q9Y666 1083 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 SCINQ9Y6U3 715 aa9.34□□□□□ -0.91
SMARCA2-243ENST00000635590 A0A096LPE4 126 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 A0A1W2PPZ6 126 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 RNF223E7ERA6 249 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 PICALMQ13492 652 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 MAP7Q14244 749 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 DHCR24Q15392 516 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 ANKRD13DQ6ZTN6 518 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 NCAPG2Q86XI2 1143 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 SPATS2Q86XZ4 545 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 AHI1Q8N157 1196 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 PJA1Q8NG27 643 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 MARVELD3Q96A59 401 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 SARGQ9BW04 601 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 NRBP1Q9UHY1 535 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 DHX57Q6P158 1386 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 DNAJC8O75937 253 aaPredicted RBP9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 COL6A1P12109 1028 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 TARSP26639 723 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 MAN1A1P33908 653 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 HTR3AP46098 478 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 RPL6Q02878 288 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 LRRFIP1Q32MZ4 808 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 COL13A1Q5TAT6 717 aaPredicted RBP9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 EFCAB2Q5VUJ9 269 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 CXorf57Q6NSI4 855 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 KIAA1211LQ6NV74 962 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 UNC5AQ6ZN44 842 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 KRT25Q7Z3Z0 450 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 TAB3Q8N5C8 712 aaPredicted RBP9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 COG1Q8WTW3 980 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 TMEM40Q8WWA1 233 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 HHIPQ96QV1 700 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 PAGR1Q9BTK6 254 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 FBRSQ9HAH7 460 aa9.33□□□□□ -0.92
SMARCA2-243ENST00000635590 IQGAP2Q13576 1575 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 RRBP1Q9P2E9 1410 aaKnown RBP9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 TRBV23-1A0A0A0MS06 115 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 BRINP1O60477 761 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 TCEA3O75764 348 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 ACRP10323 421 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 TRAPPC10P48553 1259 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 TMPRSS15P98073 1019 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 SYDE2Q5VT97 1194 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 MORC1Q86VD1 984 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 TPH2Q8IWU9 490 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms