RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 MARCH10Q8NA82 808 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 GRIN3AQ8TCU5 1115 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 TMC1Q8TDI8 760 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 XAGE3Q8WTP9 111 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 ELMO3Q96BJ8 720 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 MCOLN1Q9GZU1 580 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 ADAMTS10Q9H324 1103 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 RTEL1Q9NZ71 1219 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 TMEM59LQ9UK28 342 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 KCTD3Q9Y597 815 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 ST14Q9Y5Y6 855 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 CAPN6Q9Y6Q1 641 aa2.34□□□□□ -2.03
SMARCB1-209ENST00000635578 CARNS1A5YM72 827 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 WASH4PA8MWX3 477 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 H3BRB1 525 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 RFXAPO00287 272 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 FANCGO15287 622 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 NDUFB5O43674 189 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 LRIG2O94898 1065 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 HPXP02790 462 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 CELA3BP08861 270 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 NME2P22392 152 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 PDE6BP35913 854 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 NFKB2Q00653 900 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 ZNF252P-AS1Q0IIN9 211 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 SSPNQ14714 243 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 THAP5Q7Z6K1 395 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 ZDHHC14Q8IZN3 488 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 CXorf38Q8TB03 319 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 RIN3Q8TB24 985 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 CCDC97Q96F63 343 aaPredicted RBP2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 EMILIN2Q9BXX0 1053 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 NIF3L1Q9GZT8 377 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 TUT1Q9H6E5 874 aaKnown RBP2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 FBRSQ9HAH7 460 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 PCDHA4Q9UN74 947 aa2.33□□□□□ -2.04
SMARCB1-209ENST00000635578 OTOL1A6NHN0 477 aaPredicted RBP2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 GPR182O15218 404 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 PSPNO60542 156 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 FBXO24O75426 580 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 SASH1O94885 1247 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 ESR1P03372 595 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 SRFP11831 508 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 PI3P19957 117 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 GALK1P51570 392 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 PDE3BQ13370 1112 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 NKG7Q16617 165 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 TIGD5Q53EQ6 642 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 ZNF385BQ569K4 471 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 PHLDB3Q6NSJ2 640 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 LETMD1Q6P1Q0 360 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 TPTE2Q6XPS3 522 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 GLYCTKQ8IVS8 523 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 KCT2Q8NC54 265 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 FEZF2Q8TBJ5 459 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 ZNF507Q8TCN5 953 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 PANK1Q8TE04 598 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 BCO2Q9BYV7 579 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 SLC6A17Q9H1V8 727 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 ADAM7Q9H2U9 754 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 NLRP2Q9NX02 1062 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 PPP4R2Q9NY27 417 aa2.32□□□□□ -2.04
SMARCB1-209ENST00000635578 TMEM88BA6NKF7 163 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 ICMTO60725 284 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 SEMA7AO75326 666 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 PAGE1O75459 146 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 ADRB1P08588 477 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 ETF1P62495 437 aaKnown RBP2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 RING1Q06587 406 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 TNK2Q07912 1038 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 SLBPQ14493 270 aaKnown RBP eCLIP2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 INPP5AQ14642 412 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 PUM1Q14671 1186 aaKnown RBP eCLIP2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 VMACQ2NL98 169 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 RASIP1Q5U651 963 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 PRAMEF13Q5VWM6 474 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 ERICH6BQ5W0A0 696 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 LLGL2Q6P1M3 1020 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 LRFN4Q6PJG9 635 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 NXPE4Q6UWF7 544 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 C22orf34Q6ZV56 151 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 TMPRSS7Q7RTY8 843 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 IRF2BP1Q8IU81 584 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 TMEM151BQ8IW70 566 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 SYT8Q8NBV8 401 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 BORCS6Q96GS4 357 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 INTS4Q96HW7 963 aaKnown RBP2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 DPH2Q9BQC3 489 aaPredicted RBP2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 XYLT2Q9H1B5 865 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 GCM1Q9NP62 436 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 GPR160Q9UJ42 338 aa2.31□□□□□ -2.04
SMARCB1-209ENST00000635578 TEX51A0A1B0GUA7 166 aa2.3□□□□□ -2.04
SMARCB1-209ENST00000635578 PEX10O60683 326 aa2.3□□□□□ -2.04
SMARCB1-209ENST00000635578 TRIM37O94972 964 aa2.3□□□□□ -2.04
SMARCB1-209ENST00000635578 XRCC5P13010 732 aaKnown RBP2.3□□□□□ -2.04
SMARCB1-209ENST00000635578 INSRRP14616 1297 aa2.3□□□□□ -2.04
SMARCB1-209ENST00000635578 TPP2P29144 1249 aaPredicted RBP2.3□□□□□ -2.04
SMARCB1-209ENST00000635578 SERPINB4P48594 390 aa2.3□□□□□ -2.04
SMARCB1-209ENST00000635578 AFF3P51826 1226 aaKnown RBP2.3□□□□□ -2.04
SMARCB1-209ENST00000635578 ARHGAP4P98171 946 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms