RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 MAP3K21Q5TCX8 1036 aa13.59□□□□□ -0.23
DDX41-218ENST00000625286 NAA16Q6N069 864 aaPredicted RBP13.59□□□□□ -0.23
DDX41-218ENST00000625286 SSH3Q8TE77 659 aa13.59□□□□□ -0.23
DDX41-218ENST00000625286 GDF15Q99988 308 aa13.59□□□□□ -0.23
DDX41-218ENST00000625286 TBC1D2Q9BYX2 928 aa13.59□□□□□ -0.23
DDX41-218ENST00000625286 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
DDX41-218ENST00000625286 TLR7Q9NYK1 1049 aaKnown RBP13.59□□□□□ -0.23
DDX41-218ENST00000625286 FLT1P17948 1338 aa13.59□□□□□ -0.23
DDX41-218ENST00000625286 RPTORQ8N122 1335 aa13.59□□□□□ -0.23
DDX41-218ENST00000625286 CYP2B6P20813 491 aa13.58□□□□□ -0.24
DDX41-218ENST00000625286 HERVK_113P62684 666 aa13.58□□□□□ -0.24
DDX41-218ENST00000625286 ATP8B2P98198 1209 aa13.58□□□□□ -0.24
DDX41-218ENST00000625286 NECAB2Q7Z6G3 386 aa13.58□□□□□ -0.24
DDX41-218ENST00000625286 FOXP4Q8IVH2 680 aaPredicted RBP13.58□□□□□ -0.24
DDX41-218ENST00000625286 USP6NLQ92738 828 aa13.58□□□□□ -0.24
DDX41-218ENST00000625286 PORCNQ9H237 461 aa13.58□□□□□ -0.24
DDX41-218ENST00000625286 DHX36Q9H2U1 1008 aaKnown RBP13.58□□□□□ -0.24
DDX41-218ENST00000625286 GPR108Q9NPR9 543 aa13.58□□□□□ -0.24
DDX41-218ENST00000625286 SAP30BPQ9UHR5 308 aaKnown RBP13.58□□□□□ -0.24
DDX41-218ENST00000625286 OGDHLQ9ULD0 1010 aa13.58□□□□□ -0.24
DDX41-218ENST00000625286 ZMYND8Q9ULU4 1186 aaPredicted RBP13.58□□□□□ -0.24
DDX41-218ENST00000625286 DDX60LQ5H9U9 1706 aaKnown RBP13.58□□□□□ -0.24
DDX41-218ENST00000625286 IPO8O15397 1037 aaKnown RBP13.57□□□□□ -0.24
DDX41-218ENST00000625286 CAPN2P17655 700 aa13.57□□□□□ -0.24
DDX41-218ENST00000625286 PABPC4Q13310 644 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDX41-218ENST00000625286 CCL14Q16627 93 aa13.57□□□□□ -0.24
DDX41-218ENST00000625286 TTC39AQ5SRH9 613 aa13.57□□□□□ -0.24
DDX41-218ENST00000625286 C7orf61Q8IZ16 206 aa13.57□□□□□ -0.24
DDX41-218ENST00000625286 ZNF512BQ96KM6 892 aaPredicted RBP13.57□□□□□ -0.24
DDX41-218ENST00000625286 C1orf115Q9H7X2 142 aa13.57□□□□□ -0.24
DDX41-218ENST00000625286 AS3MTQ9HBK9 375 aa13.57□□□□□ -0.24
DDX41-218ENST00000625286 HMX1Q9NP08 348 aaPredicted RBP13.57□□□□□ -0.24
DDX41-218ENST00000625286 DBNLQ9UJU6 430 aaKnown RBP13.57□□□□□ -0.24
DDX41-218ENST00000625286 ZBTB21Q9ULJ3 1066 aa13.57□□□□□ -0.24
DDX41-218ENST00000625286 NDUFB9Q9Y6M9 179 aa13.57□□□□□ -0.24
DDX41-218ENST00000625286 PFASO15067 1338 aa13.57□□□□□ -0.24
DDX41-218ENST00000625286 A0A1W2PPC1 479 aa13.56□□□□□ -0.24
DDX41-218ENST00000625286 USP17L10C9JJH3 530 aa13.56□□□□□ -0.24
DDX41-218ENST00000625286 CNMDO75829 334 aa13.56□□□□□ -0.24
DDX41-218ENST00000625286 BAG3O95817 575 aa13.56□□□□□ -0.24
DDX41-218ENST00000625286 ASNSP08243 561 aa13.56□□□□□ -0.24
DDX41-218ENST00000625286 SYN1P17600 705 aa13.56□□□□□ -0.24
DDX41-218ENST00000625286 CACNB2Q08289 660 aaPredicted RBP13.56□□□□□ -0.24
DDX41-218ENST00000625286 LHX8Q68G74 356 aa13.56□□□□□ -0.24
DDX41-218ENST00000625286 ANKLE1Q8NAG6 615 aa13.56□□□□□ -0.24
DDX41-218ENST00000625286 GPRC5AQ8NFJ5 357 aa13.56□□□□□ -0.24
DDX41-218ENST00000625286 EAF2Q96CJ1 260 aaPredicted RBP13.56□□□□□ -0.24
DDX41-218ENST00000625286 CCDC8Q9H0W5 538 aaPredicted RBP13.56□□□□□ -0.24
DDX41-218ENST00000625286 MAST2Q6P0Q8 1798 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 MYH1P12882 1939 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 C19orf81C9J6K1 198 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 CCER2I3L3R5 266 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 SURF6O75683 361 aaKnown RBP13.55□□□□□ -0.24
DDX41-218ENST00000625286 RLBP1P12271 317 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 XRCC5P13010 732 aaKnown RBP13.55□□□□□ -0.24
DDX41-218ENST00000625286 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
DDX41-218ENST00000625286 CCND3P30281 292 aaPredicted RBP13.55□□□□□ -0.24
DDX41-218ENST00000625286 BMP8BP34820 402 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 IRX3P78415 501 aaPredicted RBP13.55□□□□□ -0.24
DDX41-218ENST00000625286 CCDC158Q5M9N0 1113 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 MORN1Q5T089 497 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 NBPF3Q9H094 633 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 C11orf49Q9H6J7 331 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 ANTXR1Q9H6X2 564 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 TMOD4Q9NZQ9 345 aa13.55□□□□□ -0.24
DDX41-218ENST00000625286 NOP58Q9Y2X3 529 aaKnown RBP13.55□□□□□ -0.24
DDX41-218ENST00000625286 GH2P01242 217 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 COL6A1P12109 1028 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 PLCG2P16885 1265 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 CYP7A1P22680 504 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 ERVK-9P63128 1117 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 ERVK-24P63145 666 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 EVX2Q03828 476 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 TATDN1Q6P1N9 297 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 GPR142Q7Z601 462 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 MIGA1Q8NAN2 632 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 NOL10Q9BSC4 688 aaKnown RBP13.54□□□□□ -0.24
DDX41-218ENST00000625286 FLRT1Q9NZU1 646 aa13.54□□□□□ -0.24
DDX41-218ENST00000625286 MAGEA10P43363 369 aaPredicted RBP13.53□□□□□ -0.24
DDX41-218ENST00000625286 ZKSCAN2Q63HK3 967 aa13.53□□□□□ -0.24
DDX41-218ENST00000625286 CRACR2BQ8N4Y2 399 aaPredicted RBP13.53□□□□□ -0.24
DDX41-218ENST00000625286 ACER1Q8TDN7 264 aa13.53□□□□□ -0.24
DDX41-218ENST00000625286 CUL9Q8IWT3 2517 aa13.53□□□□□ -0.24
DDX41-218ENST00000625286 UNC80Q8N2C7 3258 aa13.52□□□□□ -0.24
DDX41-218ENST00000625286 MAPK4P31152 587 aa13.52□□□□□ -0.25
DDX41-218ENST00000625286 GUCY1A2P33402 732 aa13.52□□□□□ -0.25
DDX41-218ENST00000625286 PLCD1P51178 756 aa13.52□□□□□ -0.25
DDX41-218ENST00000625286 ZYXQ15942 572 aaKnown RBP13.52□□□□□ -0.25
DDX41-218ENST00000625286 LRRC26Q2I0M4 334 aa13.52□□□□□ -0.25
DDX41-218ENST00000625286 USP17L2Q6R6M4 530 aa13.52□□□□□ -0.25
DDX41-218ENST00000625286 Q7L0L9 218 aa13.52□□□□□ -0.25
DDX41-218ENST00000625286 PLEKHH3Q7Z736 793 aa13.52□□□□□ -0.25
DDX41-218ENST00000625286 PAGR1Q9BTK6 254 aa13.52□□□□□ -0.25
DDX41-218ENST00000625286 GINM1Q9NU53 330 aa13.52□□□□□ -0.25
DDX41-218ENST00000625286 IGHA2P01877 340 aa13.51□□□□□ -0.25
DDX41-218ENST00000625286 OS9Q13438 667 aaPredicted RBP13.51□□□□□ -0.25
DDX41-218ENST00000625286 CATSPERGQ6ZRH7 1159 aa13.51□□□□□ -0.25
DDX41-218ENST00000625286 MAGEB6Q8N7X4 407 aa13.51□□□□□ -0.25
DDX41-218ENST00000625286 SLC17A8Q8NDX2 589 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms