RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 GAS2L3Q86XJ1 694 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 DRC1Q96MC2 740 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.95□□□□□ -0.187e-7■■□□□ 13.3
SRRT-216ENST00000618262 INCENPQ9NQS7 918 aa13.95□□□□□ -0.18
SRRT-216ENST00000618262 CYP2D7A0A087X1C5 515 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 DTNBO60941 627 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 ADD2P35612 726 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 TBC1D10BQ4KMP7 808 aaPredicted RBP13.94□□□□□ -0.18
SRRT-216ENST00000618262 DACT2Q5SW24 774 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 WDR66Q8TBY9 1149 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.94□□□□□ -0.18
SRRT-216ENST00000618262 ASTN2O75129 1339 aaPredicted RBP13.94□□□□□ -0.18
SRRT-216ENST00000618262 SNED1Q8TER0 1413 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 DDX11L8A8MPP1 907 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 GPAA1O43292 621 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 LMNB1P20700 586 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 TRDNQ13061 729 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 COL9A3Q14050 684 aaPredicted RBP13.94□□□□□ -0.18
SRRT-216ENST00000618262 SAP30BPQ9UHR5 308 aaKnown RBP13.94□□□□□ -0.18
SRRT-216ENST00000618262 SCN9AQ15858 1988 aa13.94□□□□□ -0.18
SRRT-216ENST00000618262 TTF1Q15361 905 aaPredicted RBP13.93□□□□□ -0.18
SRRT-216ENST00000618262 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
SRRT-216ENST00000618262 DEF6Q9H4E7 631 aa13.93□□□□□ -0.18
SRRT-216ENST00000618262 GOPCQ9HD26 462 aa13.93□□□□□ -0.18
SRRT-216ENST00000618262 A0A1B0GUL6 1792 aa13.93□□□□□ -0.18
SRRT-216ENST00000618262 KIF13BQ9NQT8 1826 aa13.93□□□□□ -0.18
SRRT-216ENST00000618262 CPA1P15085 419 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 GMPSP49915 693 aaPredicted RBP13.92□□□□□ -0.18
SRRT-216ENST00000618262 PRAMEF18Q5VWM3 479 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 CIAPIN1Q6FI81 312 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 SH3RF3Q8TEJ3 882 aaPredicted RBP13.92□□□□□ -0.18
SRRT-216ENST00000618262 HNRNPH2P55795 449 aaKnown RBP13.92□□□□□ -0.18
SRRT-216ENST00000618262 EIF6P56537 245 aaKnown RBP13.92□□□□□ -0.18
SRRT-216ENST00000618262 GSCP56915 257 aaPredicted RBP13.92□□□□□ -0.18
SRRT-216ENST00000618262 MCMDC2Q4G0Z9 681 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 ZFYVE27Q5T4F4 411 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 MAPKAPK5Q8IW41 473 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 ZNF396Q96N95 335 aaPredicted RBP13.92□□□□□ -0.18
SRRT-216ENST00000618262 TDRD3Q9H7E2 651 aaKnown RBP13.92□□□□□ -0.18
SRRT-216ENST00000618262 AKAP11Q9UKA4 1901 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 CCP110O43303 1012 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 BTDP43251 543 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 GOLGA6L1Q8N7Z2 621 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 VEZTQ9HBM0 779 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 SLC4A4Q9Y6R1 1079 aa13.92□□□□□ -0.18
SRRT-216ENST00000618262 TCRBV5S4A2TA0A5A2 114 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 MINDY4BA8MYZ0 360 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 SGSM2O43147 1006 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 GYS2P54840 703 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 STRIP1Q5VSL9 837 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 TGFBRAP1Q8WUH2 860 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 ZNF512BQ96KM6 892 aaPredicted RBP13.91□□□□□ -0.18
SRRT-216ENST00000618262 TCEANC2Q96MN5 208 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 PALD1Q9ULE6 856 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 MAGEB6P1A0A0J9YX57 407 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 EPS15P42566 896 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 SART3Q15020 963 aaKnown RBP13.91□□□□□ -0.18
SRRT-216ENST00000618262 ANKRD13AQ8IZ07 590 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 PRPF38AQ8NAV1 312 aaKnown RBP13.91□□□□□ -0.18
SRRT-216ENST00000618262 PRMT6Q96LA8 375 aaPredicted RBP13.91□□□□□ -0.18
SRRT-216ENST00000618262 LRRC37AA6NMS7 1700 aa13.91□□□□□ -0.18
SRRT-216ENST00000618262 FAM163BP0C2L3 166 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 INHBEP58166 350 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 ZMYM1Q5SVZ6 1142 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 RSBN1LQ6PCB5 846 aaPredicted RBP13.9□□□□□ -0.18
SRRT-216ENST00000618262 MICALL2Q8IY33 904 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.9□□□□□ -0.18
SRRT-216ENST00000618262 APPBP2Q92624 585 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 CCDC196A0A1B0GTZ2 297 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 ZRANB2O95218 330 aaKnown RBP eCLIP13.9□□□□□ -0.186e-11■■■■■ 26.8
SRRT-216ENST00000618262 NFIAQ12857 509 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 C15orf52Q6ZUT6 534 aaKnown RBP13.9□□□□□ -0.18
SRRT-216ENST00000618262 OGFOD1Q8N543 542 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 FZD1Q9UP38 647 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 DAGLAQ9Y4D2 1042 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 LTBP1Q14766 1721 aa13.9□□□□□ -0.18
SRRT-216ENST00000618262 FAM196BA6NMK8 535 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 TCP10L2B9ZVM9 353 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 CYP2D6P10635 497 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 CRKP46108 304 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 CFAP100Q494V2 611 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 CHST3Q7LGC8 479 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
SRRT-216ENST00000618262 BRCA1P38398 1863 aaKnown RBP13.89□□□□□ -0.19
SRRT-216ENST00000618262 MYH13Q9UKX3 1938 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 SEMA3EO15041 775 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 PRDM1O75626 825 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 HSPD1P10809 573 aaKnown RBP13.89□□□□□ -0.19
SRRT-216ENST00000618262 ATP2B1P20020 1258 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 FOSBP53539 338 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 WDR78Q5VTH9 848 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 ZFPM1Q8IX07 1006 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 ANKRD7Q92527 254 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 CNOT7Q9UIV1 285 aaKnown RBP13.89□□□□□ -0.19
SRRT-216ENST00000618262 DLEC1Q9Y238 1755 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 GOLGA6L22H0YM25 854 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 USP17L8P0C7I0 530 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 NEFHP12036 1026 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 JAKMIP3Q5VZ66 844 aa13.89□□□□□ -0.19
SRRT-216ENST00000618262 TRIM74Q86UV6 250 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms