RNA–Protein interactions for RNA: ENST00000616278.4

DDB2-211, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 960 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-211ENST00000616278 GJA5P36382 358 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 ALX1Q15699 326 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 CERKLQ49MI3 558 aaPredicted RBP13.57□□□□□ -0.24
DDB2-211ENST00000616278 BMP2KLQ5H9B9 411 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 C16orf86Q6ZW13 317 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 MS4A4AQ96JQ5 239 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 CCDC17Q96LX7 622 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 FAM227BQ96M60 508 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 ZIC5Q96T25 663 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 ZHX2Q9Y6X8 837 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 CCDC171Q6TFL3 1326 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 RAD50Q92878 1312 aa13.57□□□□□ -0.24
DDB2-211ENST00000616278 LOC285556D6RIA3 1793 aa13.56□□□□□ -0.24
DDB2-211ENST00000616278 LAMA4Q16363 1823 aa13.56□□□□□ -0.24
DDB2-211ENST00000616278 MKRN3Q13064 507 aaKnown RBP13.56□□□□□ -0.24
DDB2-211ENST00000616278 SLC4A8Q2Y0W8 1093 aa13.56□□□□□ -0.24
DDB2-211ENST00000616278 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
DDB2-211ENST00000616278 FASTKD5Q7L8L6 764 aaKnown RBP13.56□□□□□ -0.24
DDB2-211ENST00000616278 CFHR5Q9BXR6 569 aa13.56□□□□□ -0.24
DDB2-211ENST00000616278 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.56□□□□□ -0.24
DDB2-211ENST00000616278 AFG3L2Q9Y4W6 797 aa13.56□□□□□ -0.24
DDB2-211ENST00000616278 CCL15-CCL14A0A0B4J2E2 113 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 SHMT1P34896 483 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 CTCFP49711 727 aaPredicted RBP13.55□□□□□ -0.24
DDB2-211ENST00000616278 PDE4BQ07343 736 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 CCL15Q16663 113 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 ABCB5Q2M3G0 1257 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 IFNL1Q8IU54 200 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 ZNF280CQ8ND82 737 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 WDR18Q9BV38 432 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 EPB41L4AQ9HCS5 686 aaPredicted RBP13.55□□□□□ -0.24
DDB2-211ENST00000616278 ZBTB21Q9ULJ3 1066 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 PCNTO95613 3336 aa13.55□□□□□ -0.24
DDB2-211ENST00000616278 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
DDB2-211ENST00000616278 A0A0G2JLL6 359 aaPredicted RBP13.54□□□□□ -0.24
DDB2-211ENST00000616278 MINDY4BA8MYZ0 360 aa13.54□□□□□ -0.24
DDB2-211ENST00000616278 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
DDB2-211ENST00000616278 SLURP2P0DP57 97 aa13.54□□□□□ -0.24
DDB2-211ENST00000616278 HSPD1P10809 573 aaKnown RBP13.54□□□□□ -0.24
DDB2-211ENST00000616278 CDK8P49336 464 aa13.54□□□□□ -0.24
DDB2-211ENST00000616278 NT5C2P49902 561 aa13.54□□□□□ -0.24
DDB2-211ENST00000616278 NOM1Q5C9Z4 860 aaKnown RBP13.54□□□□□ -0.24
DDB2-211ENST00000616278 CCDC129Q6ZRS4 1044 aa13.54□□□□□ -0.24
DDB2-211ENST00000616278 TMEM179Q6ZVK1 233 aa13.54□□□□□ -0.24
DDB2-211ENST00000616278 PRRT2Q7Z6L0 340 aaPredicted RBP13.54□□□□□ -0.24
DDB2-211ENST00000616278 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
DDB2-211ENST00000616278 DSCC1Q9BVC3 393 aa13.54□□□□□ -0.24
DDB2-211ENST00000616278 RNF186Q9NXI6 227 aa13.54□□□□□ -0.24
DDB2-211ENST00000616278 ANAPC4Q9UJX5 808 aa13.54□□□□□ -0.24
DDB2-211ENST00000616278 GDF11O95390 407 aa13.53□□□□□ -0.24
DDB2-211ENST00000616278 GH2P01242 217 aa13.53□□□□□ -0.24
DDB2-211ENST00000616278 CYP2D6P10635 497 aa13.53□□□□□ -0.24
DDB2-211ENST00000616278 PCP11498 1178 aaKnown RBP13.53□□□□□ -0.24
DDB2-211ENST00000616278 CHMLP26374 656 aa13.53□□□□□ -0.24
DDB2-211ENST00000616278 PPARAQ07869 468 aa13.53□□□□□ -0.24
DDB2-211ENST00000616278 RRP1BQ14684 758 aaKnown RBP13.53□□□□□ -0.24
DDB2-211ENST00000616278 SH3D19Q5HYK7 790 aa13.53□□□□□ -0.24
DDB2-211ENST00000616278 ANKRD23Q86SG2 305 aa13.53□□□□□ -0.24
DDB2-211ENST00000616278 ZNF589Q86UQ0 364 aaPredicted RBP13.53□□□□□ -0.24
DDB2-211ENST00000616278 MKNK2Q9HBH9 465 aa13.53□□□□□ -0.24
DDB2-211ENST00000616278 SLC45A1Q9Y2W3 748 aa13.53□□□□□ -0.24
DDB2-211ENST00000616278 CYP2D7A0A087X1C5 515 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 FOXN1O15353 648 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 FOXP2O15409 715 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 TRPA1O75762 1119 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 FGAP02671 866 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 USP14P54578 494 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 SPP2Q13103 211 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 PABPC4Q13310 644 aaKnown RBP eCLIP13.52□□□□□ -0.25
DDB2-211ENST00000616278 VPS53Q5VIR6 699 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 CASC1Q6TDU7 716 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 ZNF444Q8N0Y2 327 aaPredicted RBP13.52□□□□□ -0.25
DDB2-211ENST00000616278 BRI3BPQ8WY22 251 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 DYNLL2Q96FJ2 89 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 SH2D4AQ9H788 454 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 CTNNA3Q9UI47 895 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 MYH4Q9Y623 1939 aa13.52□□□□□ -0.25
DDB2-211ENST00000616278 TRIM75PA6NK02 468 aa13.51□□□□□ -0.25
DDB2-211ENST00000616278 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDB2-211ENST00000616278 MPHOSPH10O00566 681 aaKnown RBP13.51□□□□□ -0.25
DDB2-211ENST00000616278 BACE1P56817 501 aa13.51□□□□□ -0.25
DDB2-211ENST00000616278 RAB3GAP1Q15042 981 aa13.51□□□□□ -0.25
DDB2-211ENST00000616278 PPP4R3BQ5MIZ7 849 aa13.51□□□□□ -0.25
DDB2-211ENST00000616278 PTPN18Q99952 460 aa13.51□□□□□ -0.25
DDB2-211ENST00000616278 KANSL2Q9H9L4 492 aa13.51□□□□□ -0.25
DDB2-211ENST00000616278 ZFYVE28Q9HCC9 887 aa13.51□□□□□ -0.25
DDB2-211ENST00000616278 PRDM10Q9NQV6 1147 aa13.51□□□□□ -0.25
DDB2-211ENST00000616278 ZNF213O14771 459 aa13.5□□□□□ -0.25
DDB2-211ENST00000616278 SGSM2O43147 1006 aa13.5□□□□□ -0.25
DDB2-211ENST00000616278 USP17L2Q6R6M4 530 aa13.5□□□□□ -0.25
DDB2-211ENST00000616278 SLC44A5Q8NCS7 719 aa13.5□□□□□ -0.25
DDB2-211ENST00000616278 KIAA1683Q9H0B3 1180 aa13.5□□□□□ -0.25
DDB2-211ENST00000616278 RNF41Q9H4P4 317 aaPredicted RBP13.5□□□□□ -0.25
DDB2-211ENST00000616278 ARHGEF10LQ9HCE6 1279 aa13.5□□□□□ -0.25
DDB2-211ENST00000616278 TMOD4Q9NZQ9 345 aa13.5□□□□□ -0.25
DDB2-211ENST00000616278 PNMA3Q9UL41 463 aa13.5□□□□□ -0.25
DDB2-211ENST00000616278 AGTPBP1Q9UPW5 1226 aa13.5□□□□□ -0.25
DDB2-211ENST00000616278 BTBD19C9JJ37 291 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms