RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 VGLL3A8MV65 326 aa14.21□□□□□ -0.14
MSH6-213ENST00000614496 POTEB2H3BUK9 544 aa14.21□□□□□ -0.14
MSH6-213ENST00000614496 UBE3CQ15386 1083 aa14.21□□□□□ -0.14
MSH6-213ENST00000614496 TTC38Q5R3I4 469 aa14.21□□□□□ -0.14
MSH6-213ENST00000614496 SOGA3Q5TF21 947 aa14.21□□□□□ -0.14
MSH6-213ENST00000614496 NBPF11Q86T75 865 aa14.21□□□□□ -0.14
MSH6-213ENST00000614496 EPSTI1Q96J88 318 aa14.21□□□□□ -0.14
MSH6-213ENST00000614496 RSPH14Q9UHP6 348 aa14.21□□□□□ -0.14
MSH6-213ENST00000614496 STX10O60499 249 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 GNAT2P19087 354 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 METTL16Q86W50 562 aaKnown RBP14.2□□□□□ -0.14
MSH6-213ENST00000614496 HPS5Q9UPZ3 1129 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 PHLPP2Q6ZVD8 1323 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 IDEP14735 1019 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 CASP14P31944 242 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 GUCY1A2P33402 732 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 DZIP1Q86YF9 867 aaKnown RBP14.2□□□□□ -0.14
MSH6-213ENST00000614496 CENPHQ9H3R5 247 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 RFX7Q2KHR2 1363 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 ERCC3P19447 782 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 MTF1Q14872 753 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 RESP18Q5W5W9 173 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 WDR24Q96S15 920 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 PARD6BQ9BYG5 372 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 KAT14Q9H8E8 782 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 TNKSO95271 1327 aa14.2□□□□□ -0.14
MSH6-213ENST00000614496 CDC25AP30304 524 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 EPS15P42566 896 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 SPAG1Q07617 926 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 RBL2Q08999 1139 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 TTLL11Q8NHH1 800 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 SMARCC1Q92922 1105 aaPredicted RBP14.19□□□□□ -0.14
MSH6-213ENST00000614496 SEC31BQ9NQW1 1179 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 FAM47AQ5JRC9 791 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 FKBP15Q5T1M5 1219 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 HEATR3Q7Z4Q2 680 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 LCORLQ8N3X6 602 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 OXER1Q8TDS5 423 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 SYMPKQ92797 1274 aaKnown RBP14.19□□□□□ -0.14
MSH6-213ENST00000614496 CDC5LQ99459 802 aaKnown RBP14.19□□□□□ -0.14
MSH6-213ENST00000614496 MMP1P03956 469 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 PPARAQ07869 468 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 CCDC122Q5T0U0 273 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 CTR9Q6PD62 1173 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 STRBPQ96SI9 672 aaKnown RBP14.19□□□□□ -0.14
MSH6-213ENST00000614496 NAPGQ99747 312 aaPredicted RBP14.19□□□□□ -0.14
MSH6-213ENST00000614496 ATG3Q9NT62 314 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 LUC7L2Q9Y383 392 aaKnown RBP14.19□□□□□ -0.14
MSH6-213ENST00000614496 CYP2D7A0A087X1C5 515 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 BMP15O95972 392 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 ATP6V1AP38606 617 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 PLCD1P51178 756 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 PDE4BQ07343 736 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 GIGYF2Q6Y7W6 1299 aaKnown RBP14.19□□□□□ -0.14
MSH6-213ENST00000614496 HDXQ7Z353 690 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 BPIFA3Q9BQP9 254 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 ZBTB1Q9Y2K1 713 aa14.19□□□□□ -0.14
MSH6-213ENST00000614496 RTL9Q8NET4 1388 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 NUTM2BA6NNL0 878 aaPredicted RBP14.18□□□□□ -0.14
MSH6-213ENST00000614496 NUTM2EB1AL46 878 aaPredicted RBP14.18□□□□□ -0.14
MSH6-213ENST00000614496 ZBTB22O15209 634 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 ADAMTS2O95450 1211 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 FMNL1O95466 1100 aaPredicted RBP14.18□□□□□ -0.14
MSH6-213ENST00000614496 ACRBPQ8NEB7 543 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 UBN2Q6ZU65 1347 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 GRIN1Q05586 938 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 MACROD2A1Z1Q3 448 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 TEX33O43247 280 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 IFNAR1P17181 557 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 GYG1P46976 350 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 MAP9Q49MG5 647 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 TDRD12Q587J7 1177 aaKnown RBP14.18□□□□□ -0.14
MSH6-213ENST00000614496 USP49Q70CQ1 688 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 NLRP10Q86W26 655 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 ANKRD18AQ8IVF6 992 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 ZNF444Q8N0Y2 327 aaPredicted RBP14.18□□□□□ -0.14
MSH6-213ENST00000614496 SLC35F6Q8N357 371 aa14.18□□□□□ -0.14
MSH6-213ENST00000614496 PIP4K2BP78356 416 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 CCDC96Q2M329 555 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 CCDC24Q8N4L8 307 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 RABEP2Q9H5N1 569 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 RMND1Q9NWS8 449 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 MAP3K15Q6ZN16 1313 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 KIF5BP33176 963 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 PAK1Q13153 545 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 PTGDRQ13258 359 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 SPATA1Q5VX52 437 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 TCP11L1Q9NUJ3 509 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 BTG4Q9NY30 223 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 PSMA7O14818 248 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 ASIC1P78348 528 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 FMR1Q06787 632 aaKnown RBP eCLIP14.17□□□□□ -0.149e-7■■■■□ 21.8
MSH6-213ENST00000614496 RASGRF1Q13972 1273 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 LONRF2Q1L5Z9 754 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
MSH6-213ENST00000614496 CACNA2D4Q7Z3S7 1137 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 NELFBQ8WX92 580 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms