RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.59	□□□□□ -0.23
CBWD1-222	ENST00000613508	GJD2	Q9UKL4	321 aa		13.59	□□□□□ -0.23
CBWD1-222	ENST00000613508	IDH1	O75874	414 aa	Known RBP	13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	HLA-DOA	P06340	250 aa		13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	FXR1	P51114	621 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	HSP90AB4P	Q58FF6	505 aa		13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	TATDN1	Q6P1N9	297 aa		13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	HTATIP2	Q9BUP3	242 aa		13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	CRISPLD2	Q9H0B8	497 aa		13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	EHD4	Q9H223	541 aa		13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	ZBTB21	Q9ULJ3	1066 aa		13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	COLQ	Q9Y215	455 aa	Predicted RBP	13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.58	□□□□□ -0.24
CBWD1-222	ENST00000613508	USP17L10	C9JJH3	530 aa		13.57	□□□□□ -0.24
CBWD1-222	ENST00000613508	FARP2	O94887	1054 aa	Predicted RBP	13.57	□□□□□ -0.24
CBWD1-222	ENST00000613508	MS4A1	P11836	297 aa		13.57	□□□□□ -0.24
CBWD1-222	ENST00000613508	DYNLL1	P63167	89 aa	Known RBP	13.57	□□□□□ -0.24
CBWD1-222	ENST00000613508	MAP3K12	Q12852	859 aa		13.57	□□□□□ -0.24
CBWD1-222	ENST00000613508	PANK1	Q8TE04	598 aa		13.57	□□□□□ -0.24
CBWD1-222	ENST00000613508	TRIM34	Q9BYJ4	488 aa		13.57	□□□□□ -0.24
CBWD1-222	ENST00000613508	TMOD4	Q9NZQ9	345 aa		13.57	□□□□□ -0.24
CBWD1-222	ENST00000613508	HMGCR	P04035	888 aa		13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	HERVK_113	P62684	666 aa		13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	IRX3	P78415	501 aa	Predicted RBP	13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	DIEXF	Q68CQ4	756 aa	Known RBP	13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	AACS	Q86V21	672 aa		13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	MAGEB6	Q8N7X4	407 aa		13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	C12orf42	Q96LP6	360 aa		13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	P2RX7	Q99572	595 aa	Known RBP	13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	ANTXR1	Q9H6X2	564 aa		13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	SAP30BP	Q9UHR5	308 aa	Known RBP	13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	SERPINB13	Q9UIV8	391 aa		13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	EXOC6B	Q9Y2D4	811 aa		13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	LAMA3	Q16787	3333 aa		13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	TRIOBP	Q9H2D6	2365 aa		13.56	□□□□□ -0.24
CBWD1-222	ENST00000613508	XRCC5	P13010	732 aa	Known RBP	13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	TTF1	Q15361	905 aa	Predicted RBP	13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	MIGA1	Q8NAN2	632 aa		13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	GPRC5A	Q8NFJ5	357 aa		13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	RHPN1	Q8TCX5	695 aa		13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	DPF3	Q92784	378 aa		13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	DEFB118	Q96PH6	123 aa		13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	RIOK1	Q9BRS2	568 aa	Known RBP	13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	PRO3102	Q9H379	93 aa		13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	EMILIN3	Q9NT22	766 aa		13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	NR2E3	Q9Y5X4	410 aa		13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	DOCK3	Q8IZD9	2030 aa		13.55	□□□□□ -0.24
CBWD1-222	ENST00000613508	GDF11	O95390	407 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	GH2	P01242	217 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	MAP3K21	Q5TCX8	1036 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	USP17L2	Q6R6M4	530 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	TTC6	Q86TZ1	520 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	ANKLE1	Q8NAG6	615 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	TXNRD2	Q9NNW7	524 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	ZBTB40	Q9NUA8	1239 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	RBPJL	Q9UBG7	517 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	TAOK2	Q9UL54	1235 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	NDUFB9	Q9Y6M9	179 aa		13.54	□□□□□ -0.24
CBWD1-222	ENST00000613508	DDX60L	Q5H9U9	1706 aa	Known RBP	13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	TFRC	P02786	760 aa	Known RBP	13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	MAPK4	P31152	587 aa		13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	USP5	P45974	858 aa		13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	POTEE	Q6S8J3	1075 aa		13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	SOCS4	Q8WXH5	440 aa		13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	USP6NL	Q92738	828 aa		13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	KIF1BP	Q96EK5	621 aa		13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	KIAA1683	Q9H0B3	1180 aa		13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	RPTOR	Q8N122	1335 aa		13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	PLXNB2	O15031	1838 aa		13.53	□□□□□ -0.24
CBWD1-222	ENST00000613508	MYH1	P12882	1939 aa		13.52	□□□□□ -0.24
CBWD1-222	ENST00000613508	HMMR	O75330	724 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	PDE6A	P16499	860 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	USP14	P54578	494 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	ERVK-9	P63128	1117 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	ERVK-24	P63145	666 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	GABPA	Q06546	454 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	LBX2	Q6XYB7	198 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	SIRT2	Q8IXJ6	389 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	TRMT44	Q8IYL2	757 aa	Known RBP	13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	CLASRP	Q8N2M8	674 aa	Known RBP	13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	NUDT12	Q9BQG2	462 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	HMX1	Q9NP08	348 aa	Predicted RBP	13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	IL1RAPL2	Q9NP60	686 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	DDX19B	Q9UMR2	479 aa		13.52	□□□□□ -0.25
CBWD1-222	ENST00000613508	DNAH12	Q6ZR08	3092 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	MAGEB6P1	A0A0J9YX57	407 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	TCRBV5S4A2T	A0A5A2	114 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	USP17L15	C9J2P7	530 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	USP17L13	C9JLJ4	530 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	USP17L11	C9JVI0	530 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	USP17L18	D6R9N7	530 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	USP17L22	D6RA61	530 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	USP17L17	D6RBQ6	530 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	USP17L19	D6RCP7	530 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms