RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 BAZ2AQ9UIF9 1905 aaKnown RBP10.48□□□□□ -0.73
CCDC47-207ENST00000612558 USP17L12C9JPN9 530 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 USP17L21D6R901 530 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 C21orf2O43822 256 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 KCNA3P22001 575 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 PDIA3P30101 505 aaKnown RBP10.48□□□□□ -0.73
CCDC47-207ENST00000612558 BTDP43251 543 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 SCRN1Q12765 414 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 CYB5R4Q7L1T6 521 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 RTKN2Q8IZC4 609 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 SH3RF3Q8TEJ3 882 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-207ENST00000612558 INCENPQ9NQS7 918 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 ZSWIM5Q9P217 1185 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 ARPP21Q9UBL0 812 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-207ENST00000612558 ANGEL1Q9UNK9 670 aaKnown RBP10.48□□□□□ -0.73
CCDC47-207ENST00000612558 TACC3Q9Y6A5 838 aa10.48□□□□□ -0.73
CCDC47-207ENST00000612558 KIF13BQ9NQT8 1826 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 SNED1Q8TER0 1413 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 GAKO14976 1311 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 DDX11L8A8MPP1 907 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 SH2B2O14492 632 aaPredicted RBP10.47□□□□□ -0.73
CCDC47-207ENST00000612558 KDM4AO75164 1064 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 SLC3A2P08195 630 aaKnown RBP10.47□□□□□ -0.73
CCDC47-207ENST00000612558 FGRP09769 529 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 PDCP20941 246 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 SYT1P21579 422 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 USP5P45974 858 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 FKBP1AP62942 108 aaKnown RBP10.47□□□□□ -0.73
CCDC47-207ENST00000612558 KIAA2012Q0VF49 1180 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 SART3Q15020 963 aaKnown RBP10.47□□□□□ -0.73
CCDC47-207ENST00000612558 CCDC93Q567U6 631 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 STRIP1Q5VSL9 837 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 IGDCC4Q8TDY8 1250 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 ESR2Q92731 530 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 DBNDD1Q9H9R9 158 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 TOMM22Q9NS69 142 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 MCM9Q9NXL9 1143 aa10.47□□□□□ -0.73
CCDC47-207ENST00000612558 MKRN1Q9UHC7 482 aaKnown RBP10.47□□□□□ -0.73
CCDC47-207ENST00000612558 KLF18A0A0U1RQI7 1052 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 STX6O43752 255 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 DHX16O60231 1041 aaKnown RBP10.46□□□□□ -0.74
CCDC47-207ENST00000612558 ECE2O60344 883 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 BAG4O95429 457 aaKnown RBP10.46□□□□□ -0.74
CCDC47-207ENST00000612558 LIFRP42702 1097 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 CCT2P78371 535 aaKnown RBP10.46□□□□□ -0.74
CCDC47-207ENST00000612558 R3HDM1Q15032 1099 aaKnown RBP10.46□□□□□ -0.74
CCDC47-207ENST00000612558 RRP12Q5JTH9 1297 aaKnown RBP10.46□□□□□ -0.74
CCDC47-207ENST00000612558 SOGA3Q5TF21 947 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 CERS5Q8N5B7 392 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 NKX2-3Q8TAU0 364 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 DDX12PQ92771 950 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 PSMD1Q99460 953 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 PIM2Q9P1W9 311 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 BRPF3Q9ULD4 1205 aa10.46□□□□□ -0.74
CCDC47-207ENST00000612558 NAP1L2Q9ULW6 460 aaPredicted RBP10.46□□□□□ -0.74
CCDC47-207ENST00000612558 CYP2D7A0A087X1C5 515 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 ERICH2A1L162 156 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 GOLGA6L22H0YM25 854 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 IFIT3O14879 490 aaKnown RBP10.45□□□□□ -0.74
CCDC47-207ENST00000612558 ORC4O43929 436 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 PTMSP20962 102 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 NT5C2P49902 561 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 AOC3Q16853 763 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 TMEM67Q5HYA8 995 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 LARP1BQ659C4 914 aaKnown RBP10.45□□□□□ -0.74
CCDC47-207ENST00000612558 SGMS1Q86VZ5 419 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 AMOTL1Q8IY63 956 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 STK11IPQ8N1F8 1099 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 TMTC2Q8N394 836 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 SMARCC2Q8TAQ2 1214 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 TGFBRAP1Q8WUH2 860 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 MRIQ9BWK5 157 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 VPS33BQ9H267 617 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 LY9Q9HBG7 655 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 TTF2Q9UNY4 1162 aaKnown RBP10.45□□□□□ -0.74
CCDC47-207ENST00000612558 DAGLAQ9Y4D2 1042 aa10.45□□□□□ -0.74
CCDC47-207ENST00000612558 USP17L3A6NCW0 530 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 USP17L4A6NCW7 530 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 GOLGA8BA8MQT2 603 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 F8W031 263 aaPredicted RBP10.44□□□□□ -0.74
CCDC47-207ENST00000612558 PPIP5K2O43314 1243 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 ZSCAN22P10073 491 aaPredicted RBP10.44□□□□□ -0.74
CCDC47-207ENST00000612558 RHBDL3P58872 404 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 HMGN5P82970 282 aaKnown RBP10.44□□□□□ -0.74
CCDC47-207ENST00000612558 PDE4BQ07343 736 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 DACT2Q5SW24 774 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 C12orf60Q5U649 245 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 HHIPL2Q6UWX4 724 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 NFXL1Q6ZNB6 911 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 USP17L1Q7RTZ2 530 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 TEX11Q8IYF3 940 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 NSUN7Q8NE18 718 aaKnown RBP10.44□□□□□ -0.74
CCDC47-207ENST00000612558 KCNQ5Q9NR82 932 aa10.44□□□□□ -0.74
CCDC47-207ENST00000612558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC47-207ENST00000612558 CCDC69A6NI79 296 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 SMIM22K7EJ46 135 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 MAP3K7O43318 606 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 JAK2O60674 1132 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 CTDNEP1O95476 244 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 USP17L8P0C7I0 530 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms