RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 ZSCAN29Q8IWY8 852 aaPredicted RBP23■■□□□ 1.27
SRRM3-205ENST00000612155 IDI2Q9BXS1 227 aa23■■□□□ 1.27
SRRM3-205ENST00000612155 MYH1P12882 1939 aa23■■□□□ 1.27
SRRM3-205ENST00000612155 IQCA1LA6NCM1 817 aa23■■□□□ 1.27
SRRM3-205ENST00000612155 NBPF3Q9H094 633 aa23■■□□□ 1.27
SRRM3-205ENST00000612155 GPHNQ9NQX3 736 aaPredicted RBP23■■□□□ 1.27
SRRM3-205ENST00000612155 TACC3Q9Y6A5 838 aa23■■□□□ 1.27
SRRM3-205ENST00000612155 SCN4AP35499 1836 aa22.99■■□□□ 1.27
SRRM3-205ENST00000612155 POLR3DP05423 398 aaPredicted RBP22.99■■□□□ 1.27
SRRM3-205ENST00000612155 CERS3Q8IU89 383 aa22.99■■□□□ 1.27
SRRM3-205ENST00000612155 DYNLL2Q96FJ2 89 aa22.99■■□□□ 1.27
SRRM3-205ENST00000612155 FAM196BA6NMK8 535 aa22.99■■□□□ 1.27
SRRM3-205ENST00000612155 PFKFB2O60825 505 aa22.99■■□□□ 1.27
SRRM3-205ENST00000612155 RASA3Q14644 834 aa22.99■■□□□ 1.27
SRRM3-205ENST00000612155 NKX2-3Q8TAU0 364 aa22.99■■□□□ 1.27
SRRM3-205ENST00000612155 CTDNEP1O95476 244 aa22.98■■□□□ 1.27
SRRM3-205ENST00000612155 MMP14P50281 582 aa22.98■■□□□ 1.27
SRRM3-205ENST00000612155 CLEC11AQ9Y240 323 aa22.98■■□□□ 1.27
SRRM3-205ENST00000612155 VEGFAP15692 232 aaPredicted RBP22.97■■□□□ 1.27
SRRM3-205ENST00000612155 ALX1Q15699 326 aa22.97■■□□□ 1.27
SRRM3-205ENST00000612155 USP50Q70EL3 339 aaPredicted RBP22.97■■□□□ 1.27
SRRM3-205ENST00000612155 FERMT3Q86UX7 667 aa22.97■■□□□ 1.27
SRRM3-205ENST00000612155 TBC1D10CQ8IV04 446 aa22.97■■□□□ 1.27
SRRM3-205ENST00000612155 ZNF213O14771 459 aa22.97■■□□□ 1.27
SRRM3-205ENST00000612155 PPARAQ07869 468 aa22.97■■□□□ 1.27
SRRM3-205ENST00000612155 FAM173BQ6P4H8 233 aa22.97■■□□□ 1.27
SRRM3-205ENST00000612155 SLC44A5Q8NCS7 719 aa22.97■■□□□ 1.27
SRRM3-205ENST00000612155 CTNNA3Q9UI47 895 aa22.97■■□□□ 1.27
SRRM3-205ENST00000612155 SYCE3A1L190 88 aa22.96■■□□□ 1.27
SRRM3-205ENST00000612155 ADM5C9JUS6 153 aa22.96■■□□□ 1.27
SRRM3-205ENST00000612155 FIBPO43427 364 aa22.96■■□□□ 1.27
SRRM3-205ENST00000612155 PRDM1O75626 825 aa22.96■■□□□ 1.27
SRRM3-205ENST00000612155 DEFB129Q9H1M3 183 aa22.96■■□□□ 1.27
SRRM3-205ENST00000612155 DDX60LQ5H9U9 1706 aaKnown RBP22.96■■□□□ 1.27
SRRM3-205ENST00000612155 IMMTQ16891 758 aaKnown RBP22.96■■□□□ 1.27
SRRM3-205ENST00000612155 C12orf60Q5U649 245 aa22.96■■□□□ 1.27
SRRM3-205ENST00000612155 GIMAP6Q6P9H5 292 aa22.96■■□□□ 1.27
SRRM3-205ENST00000612155 SMARCC2Q8TAQ2 1214 aa22.96■■□□□ 1.27
SRRM3-205ENST00000612155 RBSNQ9H1K0 784 aa22.96■■□□□ 1.27
SRRM3-205ENST00000612155 FZD1Q9UP38 647 aa22.96■■□□□ 1.27
SRRM3-205ENST00000612155 MB21D2Q8IYB1 491 aaPredicted RBP22.95■■□□□ 1.26
SRRM3-205ENST00000612155 UBE2Q2Q8WVN8 375 aa22.95■■□□□ 1.26
SRRM3-205ENST00000612155 ANTXR2P58335 489 aa22.94■■□□□ 1.26
SRRM3-205ENST00000612155 FGD1P98174 961 aa22.94■■□□□ 1.26
SRRM3-205ENST00000612155 MAP1SQ66K74 1059 aaPredicted RBP22.94■■□□□ 1.26
SRRM3-205ENST00000612155 NSUN7Q8NE18 718 aaKnown RBP22.94■■□□□ 1.26
SRRM3-205ENST00000612155 FAM151AQ8WW52 585 aa22.94■■□□□ 1.26
SRRM3-205ENST00000612155 DDX11Q96FC9 970 aa22.94■■□□□ 1.26
SRRM3-205ENST00000612155 CSRNP1Q96S65 589 aa22.94■■□□□ 1.26
SRRM3-205ENST00000612155 RTN4Q9NQC3 1192 aaKnown RBP22.94■■□□□ 1.26
SRRM3-205ENST00000612155 ARPP21Q9UBL0 812 aaPredicted RBP22.94■■□□□ 1.26
SRRM3-205ENST00000612155 ATP6V1DQ9Y5K8 247 aa22.94■■□□□ 1.26
SRRM3-205ENST00000612155 ENTPD3O75355 529 aa22.94■■□□□ 1.26
SRRM3-205ENST00000612155 PDCP20941 246 aa22.94■■□□□ 1.26
SRRM3-205ENST00000612155 FMR1Q06787 632 aaKnown RBP eCLIP22.94■■□□□ 1.26
SRRM3-205ENST00000612155 DCPSQ96C86 337 aaKnown RBP22.94■■□□□ 1.26
SRRM3-205ENST00000612155 NCOA5Q9HCD5 579 aaKnown RBP22.94■■□□□ 1.26
SRRM3-205ENST00000612155 PDIA3P30101 505 aaKnown RBP22.93■■□□□ 1.26
SRRM3-205ENST00000612155 CCT2P78371 535 aaKnown RBP22.93■■□□□ 1.26
SRRM3-205ENST00000612155 MIGA2Q7L4E1 593 aa22.93■■□□□ 1.26
SRRM3-205ENST00000612155 FBXL16Q8N461 479 aa22.93■■□□□ 1.26
SRRM3-205ENST00000612155 NBPF12Q5TAG4 269 aaPredicted RBP22.93■■□□□ 1.26
SRRM3-205ENST00000612155 LRSAM1Q6UWE0 723 aa22.93■■□□□ 1.26
SRRM3-205ENST00000612155 GLIS2Q9BZE0 524 aaPredicted RBP22.93■■□□□ 1.26
SRRM3-205ENST00000612155 TOMM22Q9NS69 142 aa22.93■■□□□ 1.26
SRRM3-205ENST00000612155 ZMYM6O95789 1325 aa22.92■■□□□ 1.26
SRRM3-205ENST00000612155 SBK1Q52WX2 424 aa22.92■■□□□ 1.26
SRRM3-205ENST00000612155 RRP12Q5JTH9 1297 aaKnown RBP22.92■■□□□ 1.26
SRRM3-205ENST00000612155 KRT26Q7Z3Y9 468 aa22.92■■□□□ 1.26
SRRM3-205ENST00000612155 PNMA8AQ86V59 439 aaPredicted RBP22.92■■□□□ 1.26
SRRM3-205ENST00000612155 TEPSINQ96N21 525 aa22.92■■□□□ 1.26
SRRM3-205ENST00000612155 NEDD4P46934 1319 aa22.92■■□□□ 1.26
SRRM3-205ENST00000612155 LAMB1P07942 1786 aa22.92■■□□□ 1.26
SRRM3-205ENST00000612155 EVCP57679 992 aa22.91■■□□□ 1.26
SRRM3-205ENST00000612155 TPRNQ4KMQ1 711 aa22.91■■□□□ 1.26
SRRM3-205ENST00000612155 FKBP1CQ5VVH2 108 aa22.91■■□□□ 1.26
SRRM3-205ENST00000612155 FAM83AQ86UY5 434 aa22.91■■□□□ 1.26
SRRM3-205ENST00000612155 APOBEC3FQ8IUX4 373 aaKnown RBP22.91■■□□□ 1.26
SRRM3-205ENST00000612155 GPBP1L1Q9HC44 474 aaPredicted RBP22.91■■□□□ 1.26
SRRM3-205ENST00000612155 PGAP2Q9UHJ9 254 aa22.91■■□□□ 1.26
SRRM3-205ENST00000612155 SIPA1L1O43166 1804 aa22.91■■□□□ 1.26
SRRM3-205ENST00000612155 TNNI2P48788 182 aa22.91■■□□□ 1.26
SRRM3-205ENST00000612155 TNFAIP1Q13829 316 aa22.91■■□□□ 1.26
SRRM3-205ENST00000612155 LLPHQ9BRT6 129 aaKnown RBP22.91■■□□□ 1.26
SRRM3-205ENST00000612155 DNAJC18Q9H819 358 aa22.91■■□□□ 1.26
SRRM3-205ENST00000612155 UBE2HP62256 183 aa22.9■■□□□ 1.26
SRRM3-205ENST00000612155 SULF1Q8IWU6 871 aa22.9■■□□□ 1.26
SRRM3-205ENST00000612155 AMOTL1Q8IY63 956 aa22.9■■□□□ 1.26
SRRM3-205ENST00000612155 ZNF274Q96GC6 653 aaPredicted RBP22.9■■□□□ 1.26
SRRM3-205ENST00000612155 PRC1O43663 620 aa22.9■■□□□ 1.26
SRRM3-205ENST00000612155 PPFIA3O75145 1194 aa22.9■■□□□ 1.26
SRRM3-205ENST00000612155 NASPP49321 788 aaPredicted RBP22.9■■□□□ 1.26
SRRM3-205ENST00000612155 PRKG1Q13976 671 aa22.9■■□□□ 1.26
SRRM3-205ENST00000612155 TTC6Q86TZ1 520 aa22.9■■□□□ 1.26
SRRM3-205ENST00000612155 TRAF5O00463 557 aa22.89■■□□□ 1.26
SRRM3-205ENST00000612155 NPM3O75607 178 aaKnown RBP22.89■■□□□ 1.26
SRRM3-205ENST00000612155 HLA-DOAP06340 250 aa22.89■■□□□ 1.26
SRRM3-205ENST00000612155 SHROOM1Q2M3G4 852 aaPredicted RBP22.89■■□□□ 1.26
SRRM3-205ENST00000612155 PTPDC1A2A3K4 754 aa22.89■■□□□ 1.25
SRRM3-205ENST00000612155 PDIA4P13667 645 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms