RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ZMYND10O75800 440 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 CTSWP56202 376 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 AKNAD1Q5T1N1 836 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 NUTM2AQ8IVF1 878 aaPredicted RBP23.24■■□□□ 1.31
SSBP3-216ENST00000610401 MPHOSPH8Q99549 860 aa23.24■■□□□ 1.31
SSBP3-216ENST00000610401 ERCC3P19447 782 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 SYMPKQ92797 1274 aaKnown RBP23.23■■□□□ 1.31
SSBP3-216ENST00000610401 CCDC102AQ96A19 550 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 SLF1Q9BQI6 1058 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 TAB2Q9NYJ8 693 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 ZBTB1Q9Y2K1 713 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 FXR1P51114 621 aaKnown RBP eCLIP23.23■■□□□ 1.31
SSBP3-216ENST00000610401 FKBP15Q5T1M5 1219 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 NLRP10Q86W26 655 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 SLC35F6Q8N357 371 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 GOLGA1Q92805 767 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 NUP88Q99567 741 aaPredicted RBP23.23■■□□□ 1.31
SSBP3-216ENST00000610401 KCND1Q9NSA2 647 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 CALCOCO1Q9P1Z2 691 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 ABCC6O95255 1503 aa23.23■■□□□ 1.31
SSBP3-216ENST00000610401 STX10O60499 249 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 PCCAP05165 728 aaPredicted RBP23.22■■□□□ 1.31
SSBP3-216ENST00000610401 TMEM87BQ96K49 555 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 C1orf167Q5SNV9 1468 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 PLEKHA8P1O95397 391 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 FMNL1O95466 1100 aaPredicted RBP23.22■■□□□ 1.31
SSBP3-216ENST00000610401 MAP3K12Q12852 859 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 C10orf67Q8IYJ2 551 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 RGS22Q8NE09 1264 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 PIGBQ92521 554 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 KIFC2Q96AC6 838 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 PNKPQ96T60 521 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 PCDH11XQ9BZA7 1347 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 PCDH11YQ9BZA8 1340 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 GSG1L2A8MUP6 293 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 RNF225M0QZC1 329 aaPredicted RBP23.22■■□□□ 1.31
SSBP3-216ENST00000610401 PTPREP23469 700 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 NCAPH2Q6IBW4 605 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 PLCD3Q8N3E9 789 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 RASSF8Q8NHQ8 419 aa23.22■■□□□ 1.31
SSBP3-216ENST00000610401 PATL2C9JE40 543 aaKnown RBP23.21■■□□□ 1.31
SSBP3-216ENST00000610401 N4BP3O15049 544 aa23.21■■□□□ 1.31
SSBP3-216ENST00000610401 KIF5CO60282 957 aa23.21■■□□□ 1.31
SSBP3-216ENST00000610401 CAPN2P17655 700 aa23.21■■□□□ 1.31
SSBP3-216ENST00000610401 MRPS25P82663 173 aaKnown RBP23.21■■□□□ 1.31
SSBP3-216ENST00000610401 SART3Q15020 963 aaKnown RBP23.21■■□□□ 1.31
SSBP3-216ENST00000610401 RABEP2Q9H5N1 569 aa23.21■■□□□ 1.31
SSBP3-216ENST00000610401 GUCA1BQ9UMX6 200 aa23.21■■□□□ 1.31
SSBP3-216ENST00000610401 ZNF654Q8IZM8 581 aa23.21■■□□□ 1.31
SSBP3-216ENST00000610401 CAPZA3Q96KX2 299 aa23.21■■□□□ 1.31
SSBP3-216ENST00000610401 TRIM34Q9BYJ4 488 aa23.21■■□□□ 1.31
SSBP3-216ENST00000610401 SYNRGQ9UMZ2 1314 aa23.2■■□□□ 1.31
SSBP3-216ENST00000610401 TRIM66O15016 1216 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 NMT2O60551 498 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 VEGFAP15692 232 aaPredicted RBP23.2■■□□□ 1.3
SSBP3-216ENST00000610401 DPYDQ12882 1025 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 FANCBQ8NB91 859 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 IL2RBP14784 551 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 MCM7P33993 719 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 RRAGBQ5VZM2 374 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 GPR161Q8N6U8 529 aaKnown RBP23.2■■□□□ 1.3
SSBP3-216ENST00000610401 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.2■■□□□ 1.3
SSBP3-216ENST00000610401 FAM193AP78312 1265 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 MORC3Q14149 939 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 TTF1Q15361 905 aaPredicted RBP23.2■■□□□ 1.3
SSBP3-216ENST00000610401 CRACR2BQ8N4Y2 399 aaPredicted RBP23.2■■□□□ 1.3
SSBP3-216ENST00000610401 MLKLQ8NB16 471 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 SHISA4Q96DD7 197 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 SRRTQ9BXP5 876 aaKnown RBP23.2■■□□□ 1.3
SSBP3-216ENST00000610401 LCMT1Q9UIC8 334 aa23.2■■□□□ 1.3
SSBP3-216ENST00000610401 ACTN4O43707 911 aaKnown RBP23.19■■□□□ 1.3
SSBP3-216ENST00000610401 GTF2E1P29083 439 aaPredicted RBP23.19■■□□□ 1.3
SSBP3-216ENST00000610401 RAD51AP2Q09MP3 1159 aa23.19■■□□□ 1.3
SSBP3-216ENST00000610401 TBX2Q13207 712 aaPredicted RBP23.19■■□□□ 1.3
SSBP3-216ENST00000610401 JAKMIP3Q5VZ66 844 aa23.19■■□□□ 1.3
SSBP3-216ENST00000610401 FBXL16Q8N461 479 aa23.19■■□□□ 1.3
SSBP3-216ENST00000610401 ATG3Q9NT62 314 aa23.19■■□□□ 1.3
SSBP3-216ENST00000610401 ZNF18P17022 549 aa23.19■■□□□ 1.3
SSBP3-216ENST00000610401 CYP7A1P22680 504 aa23.19■■□□□ 1.3
SSBP3-216ENST00000610401 FUT8Q9BYC5 575 aa23.19■■□□□ 1.3
SSBP3-216ENST00000610401 HDAC6Q9UBN7 1215 aa23.19■■□□□ 1.3
SSBP3-216ENST00000610401 ADAM21Q9UKJ8 722 aa23.19■■□□□ 1.3
SSBP3-216ENST00000610401 ADGRG1Q9Y653 693 aa23.19■■□□□ 1.3
SSBP3-216ENST00000610401 IFNAR1P17181 557 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 NR1I3Q14994 352 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.18■■□□□ 1.3
SSBP3-216ENST00000610401 TRIM75PA6NK02 468 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 ADAMTS3O15072 1205 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 SRGAP2O75044 1071 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 PPARDQ03181 441 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 UBE3CQ15386 1083 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 RILPL1Q5EBL4 403 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 TAF3Q5VWG9 929 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 ENOX1Q8TC92 643 aaKnown RBP23.18■■□□□ 1.3
SSBP3-216ENST00000610401 ABCB6Q9NP58 842 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 NWD2Q9ULI1 1742 aa23.18■■□□□ 1.3
SSBP3-216ENST00000610401 STARD3NLO95772 234 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 DHX8Q14562 1220 aaKnown RBP23.17■■□□□ 1.3
SSBP3-216ENST00000610401 ADGRA1Q86SQ6 560 aa23.17■■□□□ 1.3
SSBP3-216ENST00000610401 ARFGEF2Q9Y6D5 1785 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms