RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 TRIM32Q13049 653 aa19.39■□□□□ 0.69
HDDC2-203ENST00000608284 OS9Q13438 667 aaPredicted RBP19.39■□□□□ 0.69
HDDC2-203ENST00000608284 PI16Q6UXB8 463 aa19.39■□□□□ 0.69
HDDC2-203ENST00000608284 TGFBRAP1Q8WUH2 860 aa19.39■□□□□ 0.69
HDDC2-203ENST00000608284 UBE2OQ9C0C9 1292 aaKnown RBP19.39■□□□□ 0.69
HDDC2-203ENST00000608284 IGSF3O75054 1194 aa19.38■□□□□ 0.69
HDDC2-203ENST00000608284 RARSP54136 660 aaKnown RBP19.38■□□□□ 0.69
HDDC2-203ENST00000608284 MAPKAPK5Q8IW41 473 aa19.38■□□□□ 0.69
HDDC2-203ENST00000608284 TDHQ8IZJ6 230 aa19.38■□□□□ 0.69
HDDC2-203ENST00000608284 TRIB2Q92519 343 aa19.38■□□□□ 0.69
HDDC2-203ENST00000608284 MCAMP43121 646 aa19.37■□□□□ 0.69
HDDC2-203ENST00000608284 MAGEA10P43363 369 aaPredicted RBP19.37■□□□□ 0.69
HDDC2-203ENST00000608284 PPP4CP60510 307 aa19.37■□□□□ 0.69
HDDC2-203ENST00000608284 RRP1BQ14684 758 aaKnown RBP19.37■□□□□ 0.69
HDDC2-203ENST00000608284 LRIT3Q3SXY7 679 aa19.37■□□□□ 0.69
HDDC2-203ENST00000608284 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
HDDC2-203ENST00000608284 PAGR1Q9BTK6 254 aa19.37■□□□□ 0.69
HDDC2-203ENST00000608284 MNX1P50219 401 aaPredicted RBP19.36■□□□□ 0.69
HDDC2-203ENST00000608284 ERVK-9P63128 1117 aa19.36■□□□□ 0.69
HDDC2-203ENST00000608284 ERVK-24P63145 666 aa19.36■□□□□ 0.69
HDDC2-203ENST00000608284 CCNA1P78396 465 aa19.36■□□□□ 0.69
HDDC2-203ENST00000608284 MAP3K21Q5TCX8 1036 aa19.36■□□□□ 0.69
HDDC2-203ENST00000608284 PLEKHH3Q7Z736 793 aa19.36■□□□□ 0.69
HDDC2-203ENST00000608284 SNRKQ9NRH2 765 aa19.36■□□□□ 0.69
HDDC2-203ENST00000608284 MFSD14CQ5VZR4 134 aa19.35■□□□□ 0.69
HDDC2-203ENST00000608284 CERS3Q8IU89 383 aa19.35■□□□□ 0.69
HDDC2-203ENST00000608284 FEZ1Q99689 392 aa19.35■□□□□ 0.69
HDDC2-203ENST00000608284 RBPJLQ9UBG7 517 aa19.35■□□□□ 0.69
HDDC2-203ENST00000608284 PALD1Q9ULE6 856 aa19.35■□□□□ 0.69
HDDC2-203ENST00000608284 GDF11O95390 407 aa19.34■□□□□ 0.69
HDDC2-203ENST00000608284 CACNB2Q08289 660 aaPredicted RBP19.34■□□□□ 0.69
HDDC2-203ENST00000608284 GPR142Q7Z601 462 aa19.34■□□□□ 0.69
HDDC2-203ENST00000608284 FRAT1Q92837 279 aaPredicted RBP19.34■□□□□ 0.69
HDDC2-203ENST00000608284 LBHD1Q9BQE6 289 aaPredicted RBP19.34■□□□□ 0.69
HDDC2-203ENST00000608284 GPR108Q9NPR9 543 aa19.34■□□□□ 0.69
HDDC2-203ENST00000608284 ZBTB21Q9ULJ3 1066 aa19.34■□□□□ 0.69
HDDC2-203ENST00000608284 FLT1P17948 1338 aa19.33■□□□□ 0.69
HDDC2-203ENST00000608284 WDR78Q5VTH9 848 aa19.33■□□□□ 0.68
HDDC2-203ENST00000608284 METTL16Q86W50 562 aaKnown RBP19.33■□□□□ 0.68
HDDC2-203ENST00000608284 EDC3Q96F86 508 aaKnown RBP19.33■□□□□ 0.68
HDDC2-203ENST00000608284 APBA2Q99767 749 aa19.33■□□□□ 0.68
HDDC2-203ENST00000608284 TXNRD2Q9NNW7 524 aa19.33■□□□□ 0.68
HDDC2-203ENST00000608284 SAP30BPQ9UHR5 308 aaKnown RBP19.33■□□□□ 0.68
HDDC2-203ENST00000608284 STXBP5LQ9Y2K9 1186 aa19.33■□□□□ 0.68
HDDC2-203ENST00000608284 RABGAP1Q9Y3P9 1069 aa19.33■□□□□ 0.68
HDDC2-203ENST00000608284 PHIPQ8WWQ0 1821 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 PTPRFP10586 1907 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP17L15C9J2P7 530 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP17L13C9JLJ4 530 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP17L11C9JVI0 530 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP17L18D6R9N7 530 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP17L22D6RA61 530 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP17L17D6RBQ6 530 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP17L19D6RCP7 530 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP17L20D6RJB6 530 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP5P45974 858 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP14P54578 494 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 USP17L24Q0WX57 530 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 Q3C1V9 767 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 PRKAG2Q9UGJ0 569 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.32■□□□□ 0.68
HDDC2-203ENST00000608284 IVNS1ABPQ9Y6Y0 642 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 DOCK3Q8IZD9 2030 aa19.32■□□□□ 0.68
HDDC2-203ENST00000608284 PNMA6EA0A0J9YXQ4 647 aa19.31■□□□□ 0.68
HDDC2-203ENST00000608284 CYP7A1P22680 504 aa19.31■□□□□ 0.68
HDDC2-203ENST00000608284 ATP2B2Q01814 1243 aa19.31■□□□□ 0.68
HDDC2-203ENST00000608284 MAP2K5Q13163 448 aa19.31■□□□□ 0.68
HDDC2-203ENST00000608284 TNNI3KQ59H18 835 aa19.31■□□□□ 0.68
HDDC2-203ENST00000608284 MORN1Q5T089 497 aa19.31■□□□□ 0.68
HDDC2-203ENST00000608284 CABP5Q9NP86 173 aa19.31■□□□□ 0.68
HDDC2-203ENST00000608284 FPGT-TNNI3KV9GXZ4 949 aa19.31■□□□□ 0.68
HDDC2-203ENST00000608284 MSCO60682 206 aa19.3■□□□□ 0.68
HDDC2-203ENST00000608284 GH2P01242 217 aa19.3■□□□□ 0.68
HDDC2-203ENST00000608284 CNGA1P29973 690 aa19.3■□□□□ 0.68
HDDC2-203ENST00000608284 CCND3P30281 292 aaPredicted RBP19.3■□□□□ 0.68
HDDC2-203ENST00000608284 Q7L0L9 218 aa19.3■□□□□ 0.68
HDDC2-203ENST00000608284 TTC6Q86TZ1 520 aa19.3■□□□□ 0.68
HDDC2-203ENST00000608284 USP6NLQ92738 828 aa19.3■□□□□ 0.68
HDDC2-203ENST00000608284 ZNF512BQ96KM6 892 aaPredicted RBP19.3■□□□□ 0.68
HDDC2-203ENST00000608284 PORCNQ9H237 461 aa19.3■□□□□ 0.68
HDDC2-203ENST00000608284 EMILIN3Q9NT22 766 aa19.3■□□□□ 0.68
HDDC2-203ENST00000608284 PEX10O60683 326 aa19.29■□□□□ 0.68
HDDC2-203ENST00000608284 SURF6O75683 361 aaKnown RBP19.29■□□□□ 0.68
HDDC2-203ENST00000608284 CYP2E1P05181 493 aaPredicted RBP19.29■□□□□ 0.68
HDDC2-203ENST00000608284 COL6A1P12109 1028 aa19.29■□□□□ 0.68
HDDC2-203ENST00000608284 JAG1P78504 1218 aa19.29■□□□□ 0.68
HDDC2-203ENST00000608284 RAB3GAP1Q15042 981 aa19.29■□□□□ 0.68
HDDC2-203ENST00000608284 ZYXQ15942 572 aaKnown RBP19.29■□□□□ 0.68
HDDC2-203ENST00000608284 CCL14Q16627 93 aa19.29■□□□□ 0.68
HDDC2-203ENST00000608284 LHX8Q68G74 356 aa19.29■□□□□ 0.68
HDDC2-203ENST00000608284 DBNDD2Q9BQY9 259 aa19.29■□□□□ 0.68
HDDC2-203ENST00000608284 SENP6Q9GZR1 1112 aaPredicted RBP19.29■□□□□ 0.68
HDDC2-203ENST00000608284 MTMR10Q9NXD2 777 aa19.29■□□□□ 0.68
HDDC2-203ENST00000608284 LOC285556D6RIA3 1793 aa19.29■□□□□ 0.68
HDDC2-203ENST00000608284 PFASO15067 1338 aa19.28■□□□□ 0.68
HDDC2-203ENST00000608284 SLC15A5A6NIM6 579 aa19.28■□□□□ 0.68
HDDC2-203ENST00000608284 IDH1O75874 414 aaKnown RBP19.28■□□□□ 0.68
HDDC2-203ENST00000608284 TRIM27P14373 513 aa19.28■□□□□ 0.68
HDDC2-203ENST00000608284 ZAP70P43403 619 aa19.28■□□□□ 0.68
HDDC2-203ENST00000608284 MDM2Q00987 491 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms