RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 SRGAP3O43295 1099 aa22.58■■□□□ 1.21
IRF3-231ENST00000602190 PRKAR2AP13861 404 aaKnown RBP22.58■■□□□ 1.21
IRF3-231ENST00000602190 HERVK_113P62684 666 aa22.58■■□□□ 1.21
IRF3-231ENST00000602190 MTMR2Q13614 643 aa22.58■■□□□ 1.21
IRF3-231ENST00000602190 MORN1Q5T089 497 aa22.58■■□□□ 1.21
IRF3-231ENST00000602190 TEX11Q8IYF3 940 aa22.58■■□□□ 1.21
IRF3-231ENST00000602190 NUDT12Q9BQG2 462 aa22.58■■□□□ 1.21
IRF3-231ENST00000602190 IGSF3O75054 1194 aa22.57■■□□□ 1.2
IRF3-231ENST00000602190 GNAI3P08754 354 aa22.57■■□□□ 1.2
IRF3-231ENST00000602190 SYN1P17600 705 aa22.57■■□□□ 1.2
IRF3-231ENST00000602190 SH3RF3Q8TEJ3 882 aaPredicted RBP22.57■■□□□ 1.2
IRF3-231ENST00000602190 DNAH12Q6ZR08 3092 aa22.57■■□□□ 1.2
IRF3-231ENST00000602190 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
IRF3-231ENST00000602190 CYP2B6P20813 491 aa22.56■■□□□ 1.2
IRF3-231ENST00000602190 MAPK4P31152 587 aa22.56■■□□□ 1.2
IRF3-231ENST00000602190 IRX3P78415 501 aaPredicted RBP22.56■■□□□ 1.2
IRF3-231ENST00000602190 CACNB2Q08289 660 aaPredicted RBP22.56■■□□□ 1.2
IRF3-231ENST00000602190 Q7L0L9 218 aa22.56■■□□□ 1.2
IRF3-231ENST00000602190 GPRC5AQ8NFJ5 357 aa22.56■■□□□ 1.2
IRF3-231ENST00000602190 LAMA2P24043 3122 aaKnown RBP22.56■■□□□ 1.2
IRF3-231ENST00000602190 LTBP2Q14767 1821 aa22.55■■□□□ 1.2
IRF3-231ENST00000602190 PEX10O60683 326 aa22.55■■□□□ 1.2
IRF3-231ENST00000602190 IGHA2P01877 340 aa22.55■■□□□ 1.2
IRF3-231ENST00000602190 Q3C1V9 767 aa22.55■■□□□ 1.2
IRF3-231ENST00000602190 FOXP4Q8IVH2 680 aaPredicted RBP22.55■■□□□ 1.2
IRF3-231ENST00000602190 GTF3C2Q8WUA4 911 aaPredicted RBP22.55■■□□□ 1.2
IRF3-231ENST00000602190 PORCNQ9H237 461 aa22.55■■□□□ 1.2
IRF3-231ENST00000602190 FLT1P17948 1338 aa22.55■■□□□ 1.2
IRF3-231ENST00000602190 USP17L10C9JJH3 530 aa22.54■■□□□ 1.2
IRF3-231ENST00000602190 UQCRFS1P1P0C7P4 283 aa22.54■■□□□ 1.2
IRF3-231ENST00000602190 RARSP54136 660 aaKnown RBP22.54■■□□□ 1.2
IRF3-231ENST00000602190 ERVK-9P63128 1117 aa22.54■■□□□ 1.2
IRF3-231ENST00000602190 ERVK-24P63145 666 aa22.54■■□□□ 1.2
IRF3-231ENST00000602190 SHROOM1Q2M3G4 852 aaPredicted RBP22.54■■□□□ 1.2
IRF3-231ENST00000602190 ADGRA1Q86SQ6 560 aa22.54■■□□□ 1.2
IRF3-231ENST00000602190 C12orf42Q96LP6 360 aa22.54■■□□□ 1.2
IRF3-231ENST00000602190 RAI14Q9P0K7 980 aa22.54■■□□□ 1.2
IRF3-231ENST00000602190 MYH1P12882 1939 aa22.53■■□□□ 1.2
IRF3-231ENST00000602190 PLCG2P16885 1265 aa22.53■■□□□ 1.2
IRF3-231ENST00000602190 LRRC26Q2I0M4 334 aa22.53■■□□□ 1.2
IRF3-231ENST00000602190 FAM109BQ6ICB4 259 aaPredicted RBP22.53■■□□□ 1.2
IRF3-231ENST00000602190 GPR142Q7Z601 462 aa22.53■■□□□ 1.2
IRF3-231ENST00000602190 NEUROD6Q96NK8 337 aa22.53■■□□□ 1.2
IRF3-231ENST00000602190 APBA2Q99767 749 aa22.53■■□□□ 1.2
IRF3-231ENST00000602190 GPR108Q9NPR9 543 aa22.53■■□□□ 1.2
IRF3-231ENST00000602190 TMOD4Q9NZQ9 345 aa22.53■■□□□ 1.2
IRF3-231ENST00000602190 ZBTB21Q9ULJ3 1066 aa22.53■■□□□ 1.2
IRF3-231ENST00000602190 ZNF236Q9UL36 1845 aa22.52■■□□□ 1.2
IRF3-231ENST00000602190 POTEB2H3BUK9 544 aa22.52■■□□□ 1.2
IRF3-231ENST00000602190 ZKSCAN1P17029 563 aaPredicted RBP22.52■■□□□ 1.2
IRF3-231ENST00000602190 CCND3P30281 292 aaPredicted RBP22.52■■□□□ 1.2
IRF3-231ENST00000602190 CCL14Q16627 93 aa22.52■■□□□ 1.2
IRF3-231ENST00000602190 ZNF512BQ96KM6 892 aaPredicted RBP22.52■■□□□ 1.2
IRF3-231ENST00000602190 UBE2OQ9C0C9 1292 aaKnown RBP22.52■■□□□ 1.2
IRF3-231ENST00000602190 EMILIN3Q9NT22 766 aa22.52■■□□□ 1.2
IRF3-231ENST00000602190 RLFQ13129 1914 aa22.51■■□□□ 1.19
IRF3-231ENST00000602190 PNMA6EA0A0J9YXQ4 647 aa22.51■■□□□ 1.19
IRF3-231ENST00000602190 RGS2P41220 211 aa22.51■■□□□ 1.19
IRF3-231ENST00000602190 AATFQ9NY61 560 aaKnown RBP eCLIP22.51■■□□□ 1.19
IRF3-231ENST00000602190 LRP2BPQ9P2M1 347 aa22.51■■□□□ 1.19
IRF3-231ENST00000602190 CNMDO75829 334 aa22.5■■□□□ 1.19
IRF3-231ENST00000602190 BAG3O95817 575 aa22.5■■□□□ 1.19
IRF3-231ENST00000602190 LBX2Q6XYB7 198 aa22.5■■□□□ 1.19
IRF3-231ENST00000602190 HOXC6P09630 235 aa22.49■■□□□ 1.19
IRF3-231ENST00000602190 PDE3AQ14432 1141 aa22.49■■□□□ 1.19
IRF3-231ENST00000602190 NAA16Q6N069 864 aaPredicted RBP22.49■■□□□ 1.19
IRF3-231ENST00000602190 PLEKHH3Q7Z736 793 aa22.49■■□□□ 1.19
IRF3-231ENST00000602190 MAPKAPK5Q8IW41 473 aa22.49■■□□□ 1.19
IRF3-231ENST00000602190 TGFBRAP1Q8WUH2 860 aa22.49■■□□□ 1.19
IRF3-231ENST00000602190 RABGAP1Q9Y3P9 1069 aa22.49■■□□□ 1.19
IRF3-231ENST00000602190 A0A0G2JMZ2 1700 aa22.48■■□□□ 1.19
IRF3-231ENST00000602190 CYP2E1P05181 493 aaPredicted RBP22.48■■□□□ 1.19
IRF3-231ENST00000602190 MAP2K5Q13163 448 aa22.48■■□□□ 1.19
IRF3-231ENST00000602190 TATDN1Q6P1N9 297 aa22.48■■□□□ 1.19
IRF3-231ENST00000602190 USP17L2Q6R6M4 530 aa22.48■■□□□ 1.19
IRF3-231ENST00000602190 PALD1Q9ULE6 856 aa22.48■■□□□ 1.19
IRF3-231ENST00000602190 GDF11O95390 407 aa22.47■■□□□ 1.19
IRF3-231ENST00000602190 POLA2Q14181 598 aa22.47■■□□□ 1.19
IRF3-231ENST00000602190 GORABQ5T7V8 394 aa22.47■■□□□ 1.19
IRF3-231ENST00000602190 GUCD1Q96NT3 240 aa22.46■■□□□ 1.19
IRF3-231ENST00000602190 NOL10Q9BSC4 688 aaKnown RBP22.46■■□□□ 1.19
IRF3-231ENST00000602190 FLRT1Q9NZU1 646 aa22.46■■□□□ 1.19
IRF3-231ENST00000602190 GNAI2P04899 355 aa22.45■■□□□ 1.18
IRF3-231ENST00000602190 TRIM27P14373 513 aa22.45■■□□□ 1.18
IRF3-231ENST00000602190 TNNI3KQ59H18 835 aa22.45■■□□□ 1.18
IRF3-231ENST00000602190 DBNDD2Q9BQY9 259 aa22.45■■□□□ 1.18
IRF3-231ENST00000602190 EHD4Q9H223 541 aa22.45■■□□□ 1.18
IRF3-231ENST00000602190 FPGT-TNNI3KV9GXZ4 949 aa22.45■■□□□ 1.18
IRF3-231ENST00000602190 SLC15A5A6NIM6 579 aa22.44■■□□□ 1.18
IRF3-231ENST00000602190 PTPREP23469 700 aa22.44■■□□□ 1.18
IRF3-231ENST00000602190 G3BP1Q13283 466 aaKnown RBP eCLIP22.44■■□□□ 1.18
IRF3-231ENST00000602190 GRB14Q14449 540 aa22.44■■□□□ 1.18
IRF3-231ENST00000602190 CATSPERGQ6ZRH7 1159 aa22.44■■□□□ 1.18
IRF3-231ENST00000602190 CRACR2BQ8N4Y2 399 aaPredicted RBP22.44■■□□□ 1.18
IRF3-231ENST00000602190 COL25A1Q9BXS0 654 aaPredicted RBP22.44■■□□□ 1.18
IRF3-231ENST00000602190 KIAA1683Q9H0B3 1180 aa22.44■■□□□ 1.18
IRF3-231ENST00000602190 EYSQ5T1H1 3165 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 USP17L15C9J2P7 530 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 USP17L13C9JLJ4 530 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 USP17L11C9JVI0 530 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms