RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	TMEM67	Q5HYA8	995 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	DIS3L2	Q8IYB7	885 aa	Known RBP	18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	RRP15	Q9Y3B9	282 aa	Known RBP	18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	TNS3	Q68CZ2	1445 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	CTAGE9	A4FU28	777 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	IVL	P07476	585 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	SPATA1	Q5VX52	437 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	MFAP3L	O75121	409 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	RPS6KA5	O75582	802 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	APP	P05067	770 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	LIFR	P42702	1097 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	MCAM	P43121	646 aa		18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	ZCRB1	Q8TBF4	217 aa	Known RBP	18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	ADD3	Q9UEY8	706 aa	Known RBP	18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	SRPRB	Q9Y5M8	271 aa	Known RBP	18.88	■□□□□ 0.61
CAPN12-211	ENST00000601685	PCDH11X	Q9BZA7	1347 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	PCDH11Y	Q9BZA8	1340 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	IFNAR1	P17181	557 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	CPLX3	Q8WVH0	158 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	FOXP1	Q9H334	677 aa	Predicted RBP	18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	N4BP1	O75113	896 aa	Known RBP	18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	FECH	P22830	423 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	GUCY1A2	P33402	732 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	SLC35F6	Q8N357	371 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	SUGCT	Q9HAC7	445 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	RSPH14	Q9UHP6	348 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	FAN1	Q9Y2M0	1017 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	SLC12A7	Q9Y666	1083 aa		18.87	■□□□□ 0.61
CAPN12-211	ENST00000601685	KCNJ14	Q9UNX9	436 aa		18.86	■□□□□ 0.61
CAPN12-211	ENST00000601685	TTF2	Q9UNY4	1162 aa	Known RBP	18.86	■□□□□ 0.61
CAPN12-211	ENST00000601685	PCDHB6	Q9Y5E3	794 aa		18.86	■□□□□ 0.61
CAPN12-211	ENST00000601685	PARP4	Q9UKK3	1724 aa	Known RBP	18.86	■□□□□ 0.61
CAPN12-211	ENST00000601685	WDR17	Q8IZU2	1322 aa		18.86	■□□□□ 0.61
CAPN12-211	ENST00000601685	UBE3C	Q15386	1083 aa		18.86	■□□□□ 0.61
CAPN12-211	ENST00000601685	CDKAL1	Q5VV42	579 aa		18.86	■□□□□ 0.61
CAPN12-211	ENST00000601685	TOM1L2	Q6ZVM7	507 aa		18.86	■□□□□ 0.61
CAPN12-211	ENST00000601685	CCDC51	Q96ER9	411 aa		18.86	■□□□□ 0.61
CAPN12-211	ENST00000601685	GBP3	Q9H0R5	595 aa		18.86	■□□□□ 0.61
CAPN12-211	ENST00000601685	ERVV-2	B6SEH9	535 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	VSNL1	P62760	191 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	CUL4B	Q13620	913 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	CASP8	Q14790	479 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	WHAMMP3	Q1A5X7	153 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	USP49	Q70CQ1	688 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	CTAGE1	Q96RT6	745 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	ISCA1	Q9BUE6	129 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	SYNRG	Q9UMZ2	1314 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	TUBB	P07437	444 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	RHOXF2B	P0C7M4	288 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	TNNT3	P45378	269 aa	Predicted RBP	18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	TAF7L	Q5H9L4	462 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	CNGA4	Q8IV77	575 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	RHOXF2	Q9BQY4	288 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	CSRNP2	Q9H175	543 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	EFCC1	Q9HA90	598 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	TBC1D2B	Q9UPU7	963 aa		18.85	■□□□□ 0.61
CAPN12-211	ENST00000601685	KCP	Q6ZWJ8	1503 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	SPATA31A3	Q5VYP0	1347 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	NID2	Q14112	1375 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	CTAGE15	A4D2H0	777 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	SEMA3E	O15041	775 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	CTAGE8	P0CG41	777 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	CD44	P16070	742 aa	Known RBP	18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	CASP14	P31944	242 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	PIP4K2B	P78356	416 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	TTF1	Q15361	905 aa	Predicted RBP	18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	CTAGE6	Q86UF2	777 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	CTAGE4	Q8IX94	777 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	FAM71B	Q8TC56	605 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	FAM89A	Q96GI7	184 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	NAPG	Q99747	312 aa	Predicted RBP	18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	INCENP	Q9NQS7	918 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	WWC3	Q9ULE0	1092 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	CEP131	Q9UPN4	1083 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	IFIT3	O14879	490 aa	Known RBP	18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	FILIP1L	Q4L180	1135 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	WWC2	Q6AWC2	1192 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	CDC5L	Q99459	802 aa	Known RBP	18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	PIH1D3	Q9NQM4	214 aa	Known RBP	18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	ZSWIM5	Q9P217	1185 aa		18.84	■□□□□ 0.61
CAPN12-211	ENST00000601685	ITIH6	Q6UXX5	1313 aa		18.83	■□□□□ 0.61
CAPN12-211	ENST00000601685	RIC1	Q4ADV7	1423 aa		18.83	■□□□□ 0.61
CAPN12-211	ENST00000601685	UBR2	Q8IWV8	1755 aa		18.83	■□□□□ 0.61
CAPN12-211	ENST00000601685	AKAP11	Q9UKA4	1901 aa		18.83	■□□□□ 0.61
CAPN12-211	ENST00000601685	LRP6	O75581	1613 aa		18.83	■□□□□ 0.61
CAPN12-211	ENST00000601685	GYPC	P04921	128 aa		18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	STX17	P56962	302 aa		18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	ALX1	Q15699	326 aa		18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	KLHL10	Q6JEL2	608 aa		18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	TRIM22	Q8IYM9	498 aa		18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	ACRBP	Q8NEB7	543 aa		18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	ZNF532	Q9HCE3	1301 aa		18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	TFRC	P02786	760 aa	Known RBP	18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	FXR1	P51114	621 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	NR5A1	Q13285	461 aa		18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	TCIRG1	Q13488	830 aa		18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	MYO1A	Q9UBC5	1043 aa		18.83	■□□□□ 0.6
CAPN12-211	ENST00000601685	IFIT5	Q13325	482 aa	Known RBP	18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 106 ms