RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 IFNL3Q8IZI9 196 aa9.19□□□□□ -0.94
FKRP-220ENST00000600646 ZNF444Q8N0Y2 327 aaPredicted RBP9.19□□□□□ -0.94
FKRP-220ENST00000600646 ZNF280CQ8ND82 737 aa9.19□□□□□ -0.94
FKRP-220ENST00000600646 ZFYVE28Q9HCC9 887 aa9.19□□□□□ -0.94
FKRP-220ENST00000600646 ZCCHC17Q9NP64 241 aaKnown RBP9.19□□□□□ -0.94
FKRP-220ENST00000600646 RNF186Q9NXI6 227 aa9.19□□□□□ -0.94
FKRP-220ENST00000600646 PPP4R2Q9NY27 417 aa9.19□□□□□ -0.94
FKRP-220ENST00000600646 TMOD4Q9NZQ9 345 aa9.19□□□□□ -0.94
FKRP-220ENST00000600646 OTOFQ9HC10 1997 aa9.19□□□□□ -0.94
FKRP-220ENST00000600646 TESPA1A2RU30 521 aaPredicted RBP9.18□□□□□ -0.94
FKRP-220ENST00000600646 FAM196BA6NMK8 535 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 GSG1L2A8MUP6 293 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 C19orf81C9J6K1 198 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 PDE4AP27815 886 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 DOCK1Q14185 1865 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 RAB3GAP1Q15042 981 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 ARHGEF6Q15052 776 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 SLFNL1Q499Z3 407 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 CTR9Q6PD62 1173 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 CWC27Q6UX04 472 aaKnown RBP9.18□□□□□ -0.94
FKRP-220ENST00000600646 SEC62Q99442 399 aaKnown RBP9.18□□□□□ -0.94
FKRP-220ENST00000600646 FEZ1Q99689 392 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 SH2D4AQ9H788 454 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 PRDM10Q9NQV6 1147 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 PNMA3Q9UL41 463 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 KCNH4Q9UQ05 1017 aa9.18□□□□□ -0.94
FKRP-220ENST00000600646 CCDC171Q6TFL3 1326 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 TRIM75PA6NK02 468 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 FOXN1O15353 648 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 GDF11O95390 407 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 CHGBP05060 677 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 CDK8P49336 464 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 LBX1P52954 281 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 USP14P54578 494 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 SPP2Q13103 211 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 NMIQ13287 307 aaPredicted RBP9.17□□□□□ -0.94
FKRP-220ENST00000600646 PPP4R3BQ5MIZ7 849 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 GADL1Q6ZQY3 521 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 TMEM179Q6ZVK1 233 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 C16orf86Q6ZW13 317 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 ANKRD23Q86SG2 305 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 ZIC5Q96T25 663 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 ARHGEF10LQ9HCE6 1279 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 CTNNA3Q9UI47 895 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 ZBTB21Q9ULJ3 1066 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 AFG3L2Q9Y4W6 797 aa9.17□□□□□ -0.94
FKRP-220ENST00000600646 RAD50Q92878 1312 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 A0A0G2JLL6 359 aaPredicted RBP9.16□□□□□ -0.94
FKRP-220ENST00000600646 GH2P01242 217 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 OSBPP22059 807 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 SHMT1P34896 483 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 GJA5P36382 358 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 BACE1P56817 501 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 GABPAQ06546 454 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 KIF22Q14807 665 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 TAF1CQ15572 869 aaPredicted RBP9.16□□□□□ -0.94
FKRP-220ENST00000600646 NOM1Q5C9Z4 860 aaKnown RBP9.16□□□□□ -0.94
FKRP-220ENST00000600646 KIAA1211Q6ZU35 1233 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 PRRT2Q7Z6L0 340 aaPredicted RBP9.16□□□□□ -0.94
FKRP-220ENST00000600646 PROCA1Q8NCQ7 364 aaPredicted RBP9.16□□□□□ -0.94
FKRP-220ENST00000600646 MS4A4AQ96JQ5 239 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 FAM227BQ96M60 508 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 PARK7Q99497 189 aaKnown RBP9.16□□□□□ -0.94
FKRP-220ENST00000600646 WDR18Q9BV38 432 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 CFHR5Q9BXR6 569 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 SLC45A1Q9Y2W3 748 aa9.16□□□□□ -0.94
FKRP-220ENST00000600646 ATAD5Q96QE3 1844 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 ZMYM6O95789 1325 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 A0A0D9SFI3 127 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 PDHXO00330 501 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 ZNF213O14771 459 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 TBC1D8O95759 1140 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 CYP2D6P10635 497 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 HSPD1P10809 573 aaKnown RBP9.15□□□□□ -0.94
FKRP-220ENST00000600646 HSPA8P11142 646 aaKnown RBP9.15□□□□□ -0.94
FKRP-220ENST00000600646 PCP11498 1178 aaKnown RBP9.15□□□□□ -0.94
FKRP-220ENST00000600646 NT5C2P49902 561 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 PPARAQ07869 468 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 ALX1Q15699 326 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 USP17L2Q6R6M4 530 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 CCDC129Q6ZRS4 1044 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 SMCR8Q8TEV9 937 aaPredicted RBP9.15□□□□□ -0.94
FKRP-220ENST00000600646 BRI3BPQ8WY22 251 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 DYNLL2Q96FJ2 89 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 RNF41Q9H4P4 317 aaPredicted RBP9.15□□□□□ -0.94
FKRP-220ENST00000600646 DNAJC18Q9H819 358 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 KANSL2Q9H9L4 492 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 TOMM22Q9NS69 142 aa9.15□□□□□ -0.94
FKRP-220ENST00000600646 LAMB1P07942 1786 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 DDX60LQ5H9U9 1706 aaKnown RBP9.14□□□□□ -0.95
FKRP-220ENST00000600646 ROBO3Q96MS0 1386 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 MYH8P13535 1937 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 BAZ2AQ9UIF9 1905 aaKnown RBP9.14□□□□□ -0.95
FKRP-220ENST00000600646 CYP2D7A0A087X1C5 515 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 BTBD19C9JJ37 291 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 GPR25O00155 361 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 IGF2BP3O00425 579 aaKnown RBP eCLIP9.14□□□□□ -0.95
FKRP-220ENST00000600646 FKTNO75072 461 aa9.14□□□□□ -0.95
FKRP-220ENST00000600646 TSPY3P0CV98 308 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms