RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 HMGCS2P54868 508 aa11.67□□□□□ -0.54
LINC00649-210ENST00000599421 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
LINC00649-210ENST00000599421 CENPQQ7L2Z9 268 aaPredicted RBP11.67□□□□□ -0.54
LINC00649-210ENST00000599421 DZIP1Q86YF9 867 aaKnown RBP11.67□□□□□ -0.54
LINC00649-210ENST00000599421 SLF2Q8IX21 1173 aa11.67□□□□□ -0.54
LINC00649-210ENST00000599421 ZNF384Q8TF68 577 aa11.67□□□□□ -0.54
LINC00649-210ENST00000599421 CEP126Q9P2H0 1117 aa11.67□□□□□ -0.54
LINC00649-210ENST00000599421 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
LINC00649-210ENST00000599421 MROH7-TTC4A0A0A0MT08 1334 aa11.66□□□□□ -0.54
LINC00649-210ENST00000599421 FAM196BA6NMK8 535 aa11.66□□□□□ -0.54
LINC00649-210ENST00000599421 NPM3O75607 178 aaKnown RBP11.66□□□□□ -0.54
LINC00649-210ENST00000599421 GNAI3P08754 354 aa11.66□□□□□ -0.54
LINC00649-210ENST00000599421 CYP2B6P20813 491 aa11.66□□□□□ -0.54
LINC00649-210ENST00000599421 IL15P40933 162 aaPredicted RBP11.66□□□□□ -0.54
LINC00649-210ENST00000599421 TIMM10P62072 90 aa11.66□□□□□ -0.54
LINC00649-210ENST00000599421 MDM2Q00987 491 aaPredicted RBP11.66□□□□□ -0.54
LINC00649-210ENST00000599421 SH3D19Q5HYK7 790 aa11.66□□□□□ -0.54
LINC00649-210ENST00000599421 PI16Q6UXB8 463 aa11.66□□□□□ -0.54
LINC00649-210ENST00000599421 SOCS4Q8WXH5 440 aa11.66□□□□□ -0.54
LINC00649-210ENST00000599421 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
LINC00649-210ENST00000599421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00649-210ENST00000599421 COPRSQ9NQ92 184 aa11.66□□□□□ -0.54
LINC00649-210ENST00000599421 PDS5AQ29RF7 1337 aaKnown RBP11.65□□□□□ -0.54
LINC00649-210ENST00000599421 A0A1B0GUL7 405 aa11.65□□□□□ -0.54
LINC00649-210ENST00000599421 RHBDL3P58872 404 aa11.65□□□□□ -0.54
LINC00649-210ENST00000599421 LRRC26Q2I0M4 334 aa11.65□□□□□ -0.54
LINC00649-210ENST00000599421 TRMT44Q8IYL2 757 aaKnown RBP11.65□□□□□ -0.54
LINC00649-210ENST00000599421 ABCF2Q9UG63 623 aa11.65□□□□□ -0.54
LINC00649-210ENST00000599421 HDAC5Q9UQL6 1122 aa11.65□□□□□ -0.54
LINC00649-210ENST00000599421 LTBP2Q14767 1821 aa11.65□□□□□ -0.55
LINC00649-210ENST00000599421 GPR75-ASB3A0A0A6YYF3 556 aa11.64□□□□□ -0.55
LINC00649-210ENST00000599421 USP17L5A8MUK1 530 aa11.64□□□□□ -0.55
LINC00649-210ENST00000599421 ZKSCAN1P17029 563 aaPredicted RBP11.64□□□□□ -0.55
LINC00649-210ENST00000599421 CAP2P40123 477 aa11.64□□□□□ -0.55
LINC00649-210ENST00000599421 IRX3P78415 501 aaPredicted RBP11.64□□□□□ -0.55
LINC00649-210ENST00000599421 CACNB2Q08289 660 aaPredicted RBP11.64□□□□□ -0.55
LINC00649-210ENST00000599421 TFCP2Q12800 502 aa11.64□□□□□ -0.55
LINC00649-210ENST00000599421 SPTY2D1Q68D10 685 aaPredicted RBP11.64□□□□□ -0.55
LINC00649-210ENST00000599421 LHX8Q68G74 356 aa11.64□□□□□ -0.55
LINC00649-210ENST00000599421 AS3MTQ9HBK9 375 aa11.64□□□□□ -0.55
LINC00649-210ENST00000599421 PCDHB15Q9Y5E8 787 aa11.64□□□□□ -0.55
LINC00649-210ENST00000599421 MYH1P12882 1939 aa11.63□□□□□ -0.55
LINC00649-210ENST00000599421 RLFQ13129 1914 aa11.63□□□□□ -0.55
LINC00649-210ENST00000599421 SRGAP3O43295 1099 aa11.63□□□□□ -0.55
LINC00649-210ENST00000599421 MAP4K4O95819 1239 aaPredicted RBP11.63□□□□□ -0.55
LINC00649-210ENST00000599421 GNAI2P04899 355 aa11.63□□□□□ -0.55
LINC00649-210ENST00000599421 CCND3P30281 292 aaPredicted RBP11.63□□□□□ -0.55
LINC00649-210ENST00000599421 MAPK4P31152 587 aa11.63□□□□□ -0.55
LINC00649-210ENST00000599421 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
LINC00649-210ENST00000599421 RRP1BQ14684 758 aaKnown RBP11.63□□□□□ -0.55
LINC00649-210ENST00000599421 RPAP2Q8IXW5 612 aaPredicted RBP11.63□□□□□ -0.55
LINC00649-210ENST00000599421 GPRC5AQ8NFJ5 357 aa11.63□□□□□ -0.55
LINC00649-210ENST00000599421 USP6NLQ92738 828 aa11.63□□□□□ -0.55
LINC00649-210ENST00000599421 XAGE2Q96GT9 111 aa11.63□□□□□ -0.55
LINC00649-210ENST00000599421 FAM161BQ96MY7 647 aa11.63□□□□□ -0.55
LINC00649-210ENST00000599421 TXNRD2Q9NNW7 524 aa11.63□□□□□ -0.55
LINC00649-210ENST00000599421 BACE1P56817 501 aa11.62□□□□□ -0.55
LINC00649-210ENST00000599421 HERVK_113P62684 666 aa11.62□□□□□ -0.55
LINC00649-210ENST00000599421 MECOMQ03112 1051 aa11.62□□□□□ -0.55
LINC00649-210ENST00000599421 MTX1Q13505 466 aa11.62□□□□□ -0.55
LINC00649-210ENST00000599421 HDAC1Q13547 482 aaPredicted RBP11.62□□□□□ -0.55
LINC00649-210ENST00000599421 MTMR2Q13614 643 aa11.62□□□□□ -0.55
LINC00649-210ENST00000599421 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
LINC00649-210ENST00000599421 TBC1D9Q6ZT07 1266 aa11.62□□□□□ -0.55
LINC00649-210ENST00000599421 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
LINC00649-210ENST00000599421 P2RX7Q99572 595 aaKnown RBP11.62□□□□□ -0.55
LINC00649-210ENST00000599421 LBHD1Q9BQE6 289 aaPredicted RBP11.62□□□□□ -0.55
LINC00649-210ENST00000599421 WDR18Q9BV38 432 aa11.62□□□□□ -0.55
LINC00649-210ENST00000599421 HMG20BQ9P0W2 317 aa11.62□□□□□ -0.55
LINC00649-210ENST00000599421 HERC5Q9UII4 1024 aaKnown RBP11.62□□□□□ -0.55
LINC00649-210ENST00000599421 PNMA6EA0A0J9YXQ4 647 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 PEX10O60683 326 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 IGHDP01880 384 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 RGS2P41220 211 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 ERVK-9P63128 1117 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 ERVK-24P63145 666 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 CCL14Q16627 93 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 MORN1Q5T089 497 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 GPR142Q7Z601 462 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 GTF3C2Q8WUA4 911 aaPredicted RBP11.61□□□□□ -0.55
LINC00649-210ENST00000599421 APBA2Q99767 749 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 PRDM6Q9NQX0 595 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 TMOD4Q9NZQ9 345 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 RBPJLQ9UBG7 517 aa11.61□□□□□ -0.55
LINC00649-210ENST00000599421 NAV1Q8NEY1 1877 aa11.6□□□□□ -0.55
LINC00649-210ENST00000599421 C19orf81C9J6K1 198 aa11.6□□□□□ -0.55
LINC00649-210ENST00000599421 HMMRO75330 724 aa11.6□□□□□ -0.55
LINC00649-210ENST00000599421 ASNSP08243 561 aa11.6□□□□□ -0.55
LINC00649-210ENST00000599421 GSTO1P78417 241 aa11.6□□□□□ -0.55
LINC00649-210ENST00000599421 PLEKHH3Q7Z736 793 aa11.6□□□□□ -0.55
LINC00649-210ENST00000599421 MAFAQ8NHW3 353 aaPredicted RBP11.6□□□□□ -0.55
LINC00649-210ENST00000599421 CDX2Q99626 313 aaPredicted RBP11.6□□□□□ -0.55
LINC00649-210ENST00000599421 SENP6Q9GZR1 1112 aaPredicted RBP11.6□□□□□ -0.55
LINC00649-210ENST00000599421 PORCNQ9H237 461 aa11.6□□□□□ -0.55
LINC00649-210ENST00000599421 C1orf115Q9H7X2 142 aa11.6□□□□□ -0.55
LINC00649-210ENST00000599421 LDHCP07864 332 aa11.59□□□□□ -0.55
LINC00649-210ENST00000599421 MCAMP43121 646 aa11.59□□□□□ -0.55
LINC00649-210ENST00000599421 Q3C1V9 767 aa11.59□□□□□ -0.55
LINC00649-210ENST00000599421 CCAR1Q8IX12 1150 aaKnown RBP11.59□□□□□ -0.55
LINC00649-210ENST00000599421 TEX11Q8IYF3 940 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms