RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FKBP1AP62942 108 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 GSTO1P78417 241 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 MAP3K9P80192 1104 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 CFAP100Q494V2 611 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 TMED8Q6PL24 325 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 CWC27Q6UX04 472 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 MAGEB6Q8N7X4 407 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 MAFAQ8NHW3 353 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 VEZTQ9HBM0 779 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 GABRQQ9UN88 632 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 SUGT1Q9Y2Z0 365 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 BDP1A6H8Y1 2624 aa14.46□□□□□ -0.09
SHKBP1-213ENST00000597325 MYO1BO43795 1136 aa14.45□□□□□ -0.1
SHKBP1-213ENST00000597325 PRDX5P30044 214 aa14.45□□□□□ -0.1
SHKBP1-213ENST00000597325 ADD2P35612 726 aa14.45□□□□□ -0.1
SHKBP1-213ENST00000597325 NMIQ13287 307 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-213ENST00000597325 NAA16Q6N069 864 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-213ENST00000597325 SLF2Q8IX21 1173 aa14.45□□□□□ -0.1
SHKBP1-213ENST00000597325 APPBP2Q92624 585 aa14.45□□□□□ -0.1
SHKBP1-213ENST00000597325 CDX2Q99626 313 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-213ENST00000597325 ZNF532Q9HCE3 1301 aa14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 MYO5AQ9Y4I1 1855 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 IRF6O14896 467 aa14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 INHAP05111 366 aa14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 CYP7A1P22680 504 aa14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 MFAP1P55081 439 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 MECOMQ03112 1051 aa14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 UBE3CQ15386 1083 aa14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 NOL10Q9BSC4 688 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 ESYT1Q9BSJ8 1104 aa14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 SNCAIPQ9Y6H5 919 aa14.44□□□□□ -0.1
SHKBP1-213ENST00000597325 A0A0D9SFI3 127 aa14.43□□□□□ -0.1
SHKBP1-213ENST00000597325 ADCY3O60266 1144 aa14.43□□□□□ -0.1
SHKBP1-213ENST00000597325 REC8O95072 547 aa14.43□□□□□ -0.1
SHKBP1-213ENST00000597325 SNAPC2Q13487 334 aa14.43□□□□□ -0.1
SHKBP1-213ENST00000597325 ZMYM1Q5SVZ6 1142 aa14.43□□□□□ -0.1
SHKBP1-213ENST00000597325 ANKLE1Q8NAG6 615 aa14.43□□□□□ -0.1
SHKBP1-213ENST00000597325 PXYLP1Q8TE99 480 aa14.43□□□□□ -0.1
SHKBP1-213ENST00000597325 FAM227BQ96M60 508 aa14.43□□□□□ -0.1
SHKBP1-213ENST00000597325 CSADQ9Y600 493 aa14.43□□□□□ -0.1
SHKBP1-213ENST00000597325 F8W031 263 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-213ENST00000597325 LDHCP07864 332 aa14.42□□□□□ -0.1
SHKBP1-213ENST00000597325 ELNP15502 786 aa14.42□□□□□ -0.1
SHKBP1-213ENST00000597325 MCMDC2Q4G0Z9 681 aa14.42□□□□□ -0.1
SHKBP1-213ENST00000597325 KIAA1211Q6ZU35 1233 aa14.42□□□□□ -0.1
SHKBP1-213ENST00000597325 ERO1BQ86YB8 467 aa14.42□□□□□ -0.1
SHKBP1-213ENST00000597325 NSUN4Q96CB9 384 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-213ENST00000597325 BACH2Q9BYV9 841 aa14.42□□□□□ -0.1
SHKBP1-213ENST00000597325 UPF2Q9HAU5 1272 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-213ENST00000597325 TTF2Q9UNY4 1162 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-213ENST00000597325 SYNGAP1Q96PV0 1343 aa14.41□□□□□ -0.1
SHKBP1-213ENST00000597325 TCRBV5S4A2TA0A5A2 114 aa14.41□□□□□ -0.1
SHKBP1-213ENST00000597325 SGSM2O43147 1006 aa14.41□□□□□ -0.1
SHKBP1-213ENST00000597325 BCRP11274 1271 aa14.41□□□□□ -0.1
SHKBP1-213ENST00000597325 ZNF697Q5TEC3 545 aa14.41□□□□□ -0.1
SHKBP1-213ENST00000597325 ANKRD23Q86SG2 305 aa14.41□□□□□ -0.1
SHKBP1-213ENST00000597325 MROH7-TTC4A0A0A0MT08 1334 aa14.41□□□□□ -0.1
SHKBP1-213ENST00000597325 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
SHKBP1-213ENST00000597325 MAGEB6P1A0A0J9YX57 407 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 M0R2C6 588 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 CHGBP05060 677 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 FCGRTP55899 365 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 PPIL2Q13356 520 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 GRIK5Q16478 980 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 SLFNL1Q499Z3 407 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 TJAP1Q5JTD0 557 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 MIGA1Q8NAN2 632 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 TEKT1Q969V4 418 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 NBPF3Q9H094 633 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 ANO2Q9NQ90 1003 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 REV3LO60673 3130 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 DDX60LQ5H9U9 1706 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 NCOR1O75376 2440 aa14.4□□□□□ -0.1
SHKBP1-213ENST00000597325 TMEM265A0A087WTH1 108 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 PDHXO00330 501 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 MBD4O95243 580 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 BAG3O95817 575 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 FLT3LGP49771 235 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 IRF5Q13568 498 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 MOGSQ13724 837 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 DIXDC1Q155Q3 683 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 CERS3Q8IU89 383 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 OSBP2Q969R2 916 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 SEC62Q99442 399 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 TMEM39BQ9GZU3 492 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 PUS7LQ9H0K6 701 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 SEMA6BQ9H3T3 888 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 ZNF70Q9UC06 446 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 PIEZO1Q92508 2521 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 MYH2Q9UKX2 1941 aa14.39□□□□□ -0.11
SHKBP1-213ENST00000597325 GPAA1O43292 621 aa14.38□□□□□ -0.11
SHKBP1-213ENST00000597325 PLCG2P16885 1265 aa14.38□□□□□ -0.11
SHKBP1-213ENST00000597325 RBM5P52756 815 aaKnown RBP eCLIP14.38□□□□□ -0.11
SHKBP1-213ENST00000597325 HDLBPQ00341 1268 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-213ENST00000597325 CCDC129Q6ZRS4 1044 aa14.38□□□□□ -0.11
SHKBP1-213ENST00000597325 ZNF589Q86UQ0 364 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-213ENST00000597325 ZNF384Q8TF68 577 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms