RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 TGFBRAP1Q8WUH2 860 aa17.4■□□□□ 0.38
SAFB2-205ENST00000590000 USP6NLQ92738 828 aa17.4■□□□□ 0.38
SAFB2-205ENST00000590000 PNMA3Q9UL41 463 aa17.4■□□□□ 0.38
SAFB2-205ENST00000590000 PALD1Q9ULE6 856 aa17.4■□□□□ 0.38
SAFB2-205ENST00000590000 MAP4K4O95819 1239 aaPredicted RBP17.39■□□□□ 0.37
SAFB2-205ENST00000590000 GNAI2P04899 355 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 SYN1P17600 705 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 HOXA7P31268 230 aaPredicted RBP17.39■□□□□ 0.37
SAFB2-205ENST00000590000 BACE1P56817 501 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 GSTO1P78417 241 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 C7orf61Q8IZ16 206 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 EMILIN3Q9NT22 766 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 LRP2BPQ9P2M1 347 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 HERC5Q9UII4 1024 aaKnown RBP17.39■□□□□ 0.37
SAFB2-205ENST00000590000 OGDHLQ9ULD0 1010 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 NDUFB9Q9Y6M9 179 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 RPTORQ8N122 1335 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 MYH1P12882 1939 aa17.39■□□□□ 0.37
SAFB2-205ENST00000590000 CNMDO75829 334 aa17.38■□□□□ 0.37
SAFB2-205ENST00000590000 ZAP70P43403 619 aa17.38■□□□□ 0.37
SAFB2-205ENST00000590000 EVX2Q03828 476 aa17.38■□□□□ 0.37
SAFB2-205ENST00000590000 TNNI3KQ59H18 835 aa17.38■□□□□ 0.37
SAFB2-205ENST00000590000 NECAB2Q7Z6G3 386 aa17.38■□□□□ 0.37
SAFB2-205ENST00000590000 PI4KBQ9UBF8 816 aa17.38■□□□□ 0.37
SAFB2-205ENST00000590000 SAP30BPQ9UHR5 308 aaKnown RBP17.38■□□□□ 0.37
SAFB2-205ENST00000590000 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
SAFB2-205ENST00000590000 FPGT-TNNI3KV9GXZ4 949 aa17.38■□□□□ 0.37
SAFB2-205ENST00000590000 RLBP1P12271 317 aa17.37■□□□□ 0.37
SAFB2-205ENST00000590000 HERVK_113P62684 666 aa17.37■□□□□ 0.37
SAFB2-205ENST00000590000 GORABQ5T7V8 394 aa17.37■□□□□ 0.37
SAFB2-205ENST00000590000 NAA16Q6N069 864 aaPredicted RBP17.37■□□□□ 0.37
SAFB2-205ENST00000590000 DBNLQ9UJU6 430 aaKnown RBP17.37■□□□□ 0.37
SAFB2-205ENST00000590000 ZBTB21Q9ULJ3 1066 aa17.37■□□□□ 0.37
SAFB2-205ENST00000590000 DNAH12Q6ZR08 3092 aa17.36■□□□□ 0.37
SAFB2-205ENST00000590000 A0A1W2PPC1 479 aa17.36■□□□□ 0.37
SAFB2-205ENST00000590000 UQCRFS1P1P0C7P4 283 aa17.36■□□□□ 0.37
SAFB2-205ENST00000590000 COL6A1P12109 1028 aa17.36■□□□□ 0.37
SAFB2-205ENST00000590000 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
SAFB2-205ENST00000590000 CCND3P30281 292 aaPredicted RBP17.36■□□□□ 0.37
SAFB2-205ENST00000590000 CACNB2Q08289 660 aaPredicted RBP17.36■□□□□ 0.37
SAFB2-205ENST00000590000 G3BP1Q13283 466 aaKnown RBP eCLIP17.36■□□□□ 0.37
SAFB2-205ENST00000590000 LHX8Q68G74 356 aa17.36■□□□□ 0.37
SAFB2-205ENST00000590000 Q7L0L9 218 aa17.36■□□□□ 0.37
SAFB2-205ENST00000590000 ANKLE1Q8NAG6 615 aa17.36■□□□□ 0.37
SAFB2-205ENST00000590000 SSH3Q8TE77 659 aa17.36■□□□□ 0.37
SAFB2-205ENST00000590000 HMX1Q9NP08 348 aaPredicted RBP17.36■□□□□ 0.37
SAFB2-205ENST00000590000 ASNSP08243 561 aa17.35■□□□□ 0.37
SAFB2-205ENST00000590000 BMP8BP34820 402 aa17.35■□□□□ 0.37
SAFB2-205ENST00000590000 MAGEA10P43363 369 aaPredicted RBP17.35■□□□□ 0.37
SAFB2-205ENST00000590000 MORN1Q5T089 497 aa17.35■□□□□ 0.37
SAFB2-205ENST00000590000 YTHDC1Q96MU7 727 aaKnown RBP17.35■□□□□ 0.37
SAFB2-205ENST00000590000 TBC1D2Q9BYX2 928 aa17.35■□□□□ 0.37
SAFB2-205ENST00000590000 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
SAFB2-205ENST00000590000 FLRT1Q9NZU1 646 aa17.35■□□□□ 0.37
SAFB2-205ENST00000590000 IRX3P78415 501 aaPredicted RBP17.34■□□□□ 0.37
SAFB2-205ENST00000590000 RLFQ13129 1914 aa17.34■□□□□ 0.37
SAFB2-205ENST00000590000 FTSJ3Q8IY81 847 aaKnown RBP17.34■□□□□ 0.37
SAFB2-205ENST00000590000 PANK1Q8TE04 598 aa17.34■□□□□ 0.37
SAFB2-205ENST00000590000 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
SAFB2-205ENST00000590000 NBPF3Q9H094 633 aa17.34■□□□□ 0.37
SAFB2-205ENST00000590000 DHX36Q9H2U1 1008 aaKnown RBP17.34■□□□□ 0.37
SAFB2-205ENST00000590000 C11orf49Q9H6J7 331 aa17.34■□□□□ 0.37
SAFB2-205ENST00000590000 ANTXR1Q9H6X2 564 aa17.34■□□□□ 0.37
SAFB2-205ENST00000590000 AS3MTQ9HBK9 375 aa17.34■□□□□ 0.37
SAFB2-205ENST00000590000 LAMA2P24043 3122 aaKnown RBP17.34■□□□□ 0.37
SAFB2-205ENST00000590000 USP17L10C9JJH3 530 aa17.33■□□□□ 0.36
SAFB2-205ENST00000590000 ERVK-9P63128 1117 aa17.33■□□□□ 0.36
SAFB2-205ENST00000590000 ERVK-24P63145 666 aa17.33■□□□□ 0.36
SAFB2-205ENST00000590000 ATP8B2P98198 1209 aa17.33■□□□□ 0.36
SAFB2-205ENST00000590000 PABPC4Q13310 644 aaKnown RBP eCLIP17.33■□□□□ 0.36
SAFB2-205ENST00000590000 TTC39AQ5SRH9 613 aa17.33■□□□□ 0.36
SAFB2-205ENST00000590000 GPR142Q7Z601 462 aa17.33■□□□□ 0.36
SAFB2-205ENST00000590000 FOXP4Q8IVH2 680 aaPredicted RBP17.33■□□□□ 0.36
SAFB2-205ENST00000590000 MIGA1Q8NAN2 632 aa17.33■□□□□ 0.36
SAFB2-205ENST00000590000 ACER1Q8TDN7 264 aa17.33■□□□□ 0.36
SAFB2-205ENST00000590000 ZNF512BQ96KM6 892 aaPredicted RBP17.33■□□□□ 0.36
SAFB2-205ENST00000590000 PAGR1Q9BTK6 254 aa17.33■□□□□ 0.36
SAFB2-205ENST00000590000 CCDC8Q9H0W5 538 aaPredicted RBP17.33■□□□□ 0.36
SAFB2-205ENST00000590000 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.36
SAFB2-205ENST00000590000 GH2P01242 217 aa17.32■□□□□ 0.36
SAFB2-205ENST00000590000 XRCC5P13010 732 aaKnown RBP17.32■□□□□ 0.36
SAFB2-205ENST00000590000 GUCY1A2P33402 732 aa17.32■□□□□ 0.36
SAFB2-205ENST00000590000 LRRC26Q2I0M4 334 aa17.32■□□□□ 0.36
SAFB2-205ENST00000590000 ITPRIPQ8IWB1 547 aa17.32■□□□□ 0.36
SAFB2-205ENST00000590000 GPRC5AQ8NFJ5 357 aa17.32■□□□□ 0.36
SAFB2-205ENST00000590000 NOP58Q9Y2X3 529 aaKnown RBP17.32■□□□□ 0.36
SAFB2-205ENST00000590000 C19orf81C9J6K1 198 aa17.31■□□□□ 0.36
SAFB2-205ENST00000590000 IGHA2P01877 340 aa17.31■□□□□ 0.36
SAFB2-205ENST00000590000 CAPN2P17655 700 aa17.31■□□□□ 0.36
SAFB2-205ENST00000590000 CYP7A1P22680 504 aa17.31■□□□□ 0.36
SAFB2-205ENST00000590000 ZYXQ15942 572 aaKnown RBP17.31■□□□□ 0.36
SAFB2-205ENST00000590000 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
SAFB2-205ENST00000590000 NUDT12Q9BQG2 462 aa17.31■□□□□ 0.36
SAFB2-205ENST00000590000 TMOD4Q9NZQ9 345 aa17.31■□□□□ 0.36
SAFB2-205ENST00000590000 BTBD7Q9P203 1132 aa17.31■□□□□ 0.36
SAFB2-205ENST00000590000 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
SAFB2-205ENST00000590000 BAG3O95817 575 aa17.3■□□□□ 0.36
SAFB2-205ENST00000590000 CRACR2BQ8N4Y2 399 aaPredicted RBP17.3■□□□□ 0.36
SAFB2-205ENST00000590000 SLC17A8Q8NDX2 589 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms