RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 SNRKQ9NRH2 765 aa17.13■□□□□ 0.33
VMP1-209ENST00000588915 TNNQ9UQP3 1299 aa17.13■□□□□ 0.33
VMP1-209ENST00000588915 NOP58Q9Y2X3 529 aaKnown RBP17.13■□□□□ 0.33
VMP1-209ENST00000588915 FLT1P17948 1338 aa17.13■□□□□ 0.33
VMP1-209ENST00000588915 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
VMP1-209ENST00000588915 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
VMP1-209ENST00000588915 OS9Q13438 667 aaPredicted RBP17.12■□□□□ 0.33
VMP1-209ENST00000588915 MTMR2Q13614 643 aa17.12■□□□□ 0.33
VMP1-209ENST00000588915 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
VMP1-209ENST00000588915 GPRC5AQ8NFJ5 357 aa17.12■□□□□ 0.33
VMP1-209ENST00000588915 SOCS4Q8WXH5 440 aa17.12■□□□□ 0.33
VMP1-209ENST00000588915 P2RX7Q99572 595 aaKnown RBP17.12■□□□□ 0.33
VMP1-209ENST00000588915 NUDT12Q9BQG2 462 aa17.12■□□□□ 0.33
VMP1-209ENST00000588915 DNAJC18Q9H819 358 aa17.12■□□□□ 0.33
VMP1-209ENST00000588915 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
VMP1-209ENST00000588915 MAPK4P31152 587 aa17.11■□□□□ 0.33
VMP1-209ENST00000588915 HERVK_113P62684 666 aa17.11■□□□□ 0.33
VMP1-209ENST00000588915 MAP3K21Q5TCX8 1036 aa17.11■□□□□ 0.33
VMP1-209ENST00000588915 NBPF3Q9H094 633 aa17.11■□□□□ 0.33
VMP1-209ENST00000588915 OGDHLQ9ULD0 1010 aa17.11■□□□□ 0.33
VMP1-209ENST00000588915 PALD1Q9ULE6 856 aa17.11■□□□□ 0.33
VMP1-209ENST00000588915 BMP8BP34820 402 aa17.1■□□□□ 0.33
VMP1-209ENST00000588915 ZAP70P43403 619 aa17.1■□□□□ 0.33
VMP1-209ENST00000588915 ADGRA1Q86SQ6 560 aa17.1■□□□□ 0.33
VMP1-209ENST00000588915 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
VMP1-209ENST00000588915 MAST2Q6P0Q8 1798 aa17.1■□□□□ 0.33
VMP1-209ENST00000588915 JAG1P78504 1218 aa17.09■□□□□ 0.33
VMP1-209ENST00000588915 USP17L2Q6R6M4 530 aa17.09■□□□□ 0.33
VMP1-209ENST00000588915 GDF15Q99988 308 aa17.09■□□□□ 0.33
VMP1-209ENST00000588915 RBPJLQ9UBG7 517 aa17.09■□□□□ 0.33
VMP1-209ENST00000588915 SIPA1L1O43166 1804 aa17.09■□□□□ 0.33
VMP1-209ENST00000588915 CYP7A1P22680 504 aa17.08■□□□□ 0.32
VMP1-209ENST00000588915 ERVK-9P63128 1117 aa17.08■□□□□ 0.32
VMP1-209ENST00000588915 ERVK-24P63145 666 aa17.08■□□□□ 0.32
VMP1-209ENST00000588915 PDE3AQ14432 1141 aa17.08■□□□□ 0.32
VMP1-209ENST00000588915 TRIB2Q92519 343 aa17.08■□□□□ 0.32
VMP1-209ENST00000588915 USP6NLQ92738 828 aa17.08■□□□□ 0.32
VMP1-209ENST00000588915 C12orf42Q96LP6 360 aa17.08■□□□□ 0.32
VMP1-209ENST00000588915 EHD4Q9H223 541 aa17.08■□□□□ 0.32
VMP1-209ENST00000588915 TXNRD2Q9NNW7 524 aa17.08■□□□□ 0.32
VMP1-209ENST00000588915 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.32
VMP1-209ENST00000588915 DBNLQ9UJU6 430 aaKnown RBP17.08■□□□□ 0.32
VMP1-209ENST00000588915 GDF11O95390 407 aa17.07■□□□□ 0.32
VMP1-209ENST00000588915 CYP2B6P20813 491 aa17.07■□□□□ 0.32
VMP1-209ENST00000588915 MNX1P50219 401 aaPredicted RBP17.07■□□□□ 0.32
VMP1-209ENST00000588915 TRIM32Q13049 653 aa17.07■□□□□ 0.32
VMP1-209ENST00000588915 TATDN1Q6P1N9 297 aa17.07■□□□□ 0.32
VMP1-209ENST00000588915 CCAR1Q8IX12 1150 aaKnown RBP17.07■□□□□ 0.32
VMP1-209ENST00000588915 DIS3LQ8TF46 1054 aaKnown RBP17.07■□□□□ 0.32
VMP1-209ENST00000588915 C11orf49Q9H6J7 331 aa17.07■□□□□ 0.32
VMP1-209ENST00000588915 EMILIN3Q9NT22 766 aa17.07■□□□□ 0.32
VMP1-209ENST00000588915 STAP2Q9UGK3 403 aa17.07■□□□□ 0.32
VMP1-209ENST00000588915 RABGAP1Q9Y3P9 1069 aa17.07■□□□□ 0.32
VMP1-209ENST00000588915 FOCADQ5VW36 1801 aa17.07■□□□□ 0.32
VMP1-209ENST00000588915 RGS2P41220 211 aa17.06■□□□□ 0.32
VMP1-209ENST00000588915 USP14P54578 494 aa17.06■□□□□ 0.32
VMP1-209ENST00000588915 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
VMP1-209ENST00000588915 Q3C1V9 767 aa17.06■□□□□ 0.32
VMP1-209ENST00000588915 MORN1Q5T089 497 aa17.06■□□□□ 0.32
VMP1-209ENST00000588915 GPR153Q6NV75 609 aa17.06■□□□□ 0.32
VMP1-209ENST00000588915 GPR142Q7Z601 462 aa17.06■□□□□ 0.32
VMP1-209ENST00000588915 PLEKHH3Q7Z736 793 aa17.06■□□□□ 0.32
VMP1-209ENST00000588915 TTC6Q86TZ1 520 aa17.06■□□□□ 0.32
VMP1-209ENST00000588915 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
VMP1-209ENST00000588915 EAF2Q96CJ1 260 aaPredicted RBP17.06■□□□□ 0.32
VMP1-209ENST00000588915 CCDC8Q9H0W5 538 aaPredicted RBP17.06■□□□□ 0.32
VMP1-209ENST00000588915 SERPINB13Q9UIV8 391 aa17.06■□□□□ 0.32
VMP1-209ENST00000588915 CDK5RAP2Q96SN8 1893 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 PLXNB2O15031 1838 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 USP17L15C9J2P7 530 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 USP17L13C9JLJ4 530 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 USP17L11C9JVI0 530 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 USP17L18D6R9N7 530 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 USP17L22D6RA61 530 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 USP17L17D6RBQ6 530 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 USP17L19D6RCP7 530 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 USP17L20D6RJB6 530 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 IDH1O75874 414 aaKnown RBP17.05■□□□□ 0.32
VMP1-209ENST00000588915 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
VMP1-209ENST00000588915 USP5P45974 858 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 CCNA1P78396 465 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 USP17L24Q0WX57 530 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
VMP1-209ENST00000588915 SAP30BPQ9UHR5 308 aaKnown RBP17.05■□□□□ 0.32
VMP1-209ENST00000588915 GLRX3O76003 335 aaKnown RBP17.04■□□□□ 0.32
VMP1-209ENST00000588915 GH2P01242 217 aa17.04■□□□□ 0.32
VMP1-209ENST00000588915 ZKSCAN1P17029 563 aaPredicted RBP17.04■□□□□ 0.32
VMP1-209ENST00000588915 CACNB2Q08289 660 aaPredicted RBP17.04■□□□□ 0.32
VMP1-209ENST00000588915 SHROOM1Q2M3G4 852 aaPredicted RBP17.04■□□□□ 0.32
VMP1-209ENST00000588915 LBX2Q6XYB7 198 aa17.04■□□□□ 0.32
VMP1-209ENST00000588915 ERC1Q8IUD2 1116 aa17.04■□□□□ 0.32
VMP1-209ENST00000588915 MAGEB6Q8N7X4 407 aa17.04■□□□□ 0.32
VMP1-209ENST00000588915 KIAA1683Q9H0B3 1180 aa17.04■□□□□ 0.32
VMP1-209ENST00000588915 PORCNQ9H237 461 aa17.04■□□□□ 0.32
VMP1-209ENST00000588915 CERKLQ49MI3 558 aaPredicted RBP17.03■□□□□ 0.32
VMP1-209ENST00000588915 CATSPERGQ6ZRH7 1159 aa17.03■□□□□ 0.32
VMP1-209ENST00000588915 ITPRIPQ8IWB1 547 aa17.03■□□□□ 0.32
VMP1-209ENST00000588915 C7orf61Q8IZ16 206 aa17.03■□□□□ 0.32
VMP1-209ENST00000588915 MIGA1Q8NAN2 632 aa17.03■□□□□ 0.32
VMP1-209ENST00000588915 APBA2Q99767 749 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms