RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 ZNF397Q8NF99 534 aaPredicted RBP13.02□□□□□ -0.32
BCAS3-220ENST00000588720 KIAA1328Q86T90 577 aa13.02□□□□□ -0.33
BCAS3-220ENST00000588720 TEKT1Q969V4 418 aa13.02□□□□□ -0.33
BCAS3-220ENST00000588720 ZNF202O95125 648 aa13.02□□□□□ -0.33
BCAS3-220ENST00000588720 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
BCAS3-220ENST00000588720 PAIP2Q9BPZ3 127 aaKnown RBP13.02□□□□□ -0.33
BCAS3-220ENST00000588720 VWA3AA6NCI4 1184 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 TNNI2P48788 182 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 SPAG1Q07617 926 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 TOB2Q14106 344 aaPredicted RBP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 PIK3AP1Q6ZUJ8 805 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 NOSTRINQ8IVI9 506 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 EXOC1Q9NV70 894 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 V9GYY5 206 aaPredicted RBP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 LIFRP42702 1097 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 BTDP43251 543 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 ARHGAP29Q52LW3 1261 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 RC3H1Q5TC82 1133 aaKnown RBP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 ERMNQ8TAM6 284 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 VPS54Q9P1Q0 977 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 CARMIL3Q8ND23 1372 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 MRPL12P52815 198 aaKnown RBP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 DYNLL1P63167 89 aaKnown RBP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 TTC38Q5R3I4 469 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 SH2B2O14492 632 aaPredicted RBP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 PPP1R12BO60237 982 aaPredicted RBP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 DDAH1O94760 285 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 LIG1P18858 919 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 BAG6P46379 1132 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 CELF1Q92879 486 aaKnown RBP13.01□□□□□ -0.33
BCAS3-220ENST00000588720 CTAGE1Q96RT6 745 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 USP40Q9NVE5 1235 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 FMN2Q9NZ56 1722 aa13.01□□□□□ -0.33
BCAS3-220ENST00000588720 SALL3Q9BXA9 1300 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
BCAS3-220ENST00000588720 FAM114A1Q8IWE2 563 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 CNKSR1Q969H4 720 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 ALDH8A1Q9H2A2 487 aaPredicted RBP13□□□□□ -0.33
BCAS3-220ENST00000588720 ZSWIM5Q9P217 1185 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
BCAS3-220ENST00000588720 SCARF1Q14162 830 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 C2CD5Q86YS7 1000 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 PNMA1Q8ND90 353 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 OGFRQ9NZT2 677 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 KRT79Q5XKE5 535 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 hCG_1642624A0A1W2PR95 340 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 PSMA7O14818 248 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 N4BP3O15049 544 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 RXRBP28702 533 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 MTIF2P46199 727 aaKnown RBP13□□□□□ -0.33
BCAS3-220ENST00000588720 EIF6P56537 245 aaKnown RBP13□□□□□ -0.33
BCAS3-220ENST00000588720 JAKMIP3Q5VZ66 844 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 LARGE2Q8N3Y3 721 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 SMARCC2Q8TAQ2 1214 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 TRIM47Q96LD4 638 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 GPCPD1Q9NPB8 672 aa13□□□□□ -0.33
BCAS3-220ENST00000588720 SPDYE3A6NKU9 549 aa12.99□□□□□ -0.33
BCAS3-220ENST00000588720 LETM2Q2VYF4 491 aa12.99□□□□□ -0.33
BCAS3-220ENST00000588720 FERMT2Q96AC1 680 aa12.99□□□□□ -0.33
BCAS3-220ENST00000588720 PPP1R9BQ96SB3 815 aa12.99□□□□□ -0.33
BCAS3-220ENST00000588720 NUP88Q99567 741 aaPredicted RBP12.99□□□□□ -0.33
BCAS3-220ENST00000588720 MYL5Q02045 173 aa12.99□□□□□ -0.33
BCAS3-220ENST00000588720 ITPK1Q13572 414 aa12.99□□□□□ -0.33
BCAS3-220ENST00000588720 CMTR1Q8N1G2 835 aaKnown RBP12.99□□□□□ -0.33
BCAS3-220ENST00000588720 CPLX3Q8WVH0 158 aa12.99□□□□□ -0.33
BCAS3-220ENST00000588720 GOLGA6L10A0A0M3HER8 536 aa12.99□□□□□ -0.33
BCAS3-220ENST00000588720 MECOMQ03112 1051 aa12.99□□□□□ -0.33
BCAS3-220ENST00000588720 POLR2DO15514 142 aaKnown RBP12.98□□□□□ -0.33
BCAS3-220ENST00000588720 NR1I2O75469 434 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 ASIC1P78348 528 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 UTP14CQ5TAP6 766 aaKnown RBP12.98□□□□□ -0.33
BCAS3-220ENST00000588720 CLEC17AQ6ZS10 378 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 GLT8D2Q9H1C3 349 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 TRMT1Q9NXH9 659 aaKnown RBP12.98□□□□□ -0.33
BCAS3-220ENST00000588720 RTEL1Q9NZ71 1219 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 AKAP12Q02952 1782 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 BTBD18B2RXH4 712 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 SF3B3Q15393 1217 aaKnown RBP12.98□□□□□ -0.33
BCAS3-220ENST00000588720 ALX1Q15699 326 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 GAS2L3Q86XJ1 694 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 ZNF512BQ96KM6 892 aaPredicted RBP12.98□□□□□ -0.33
BCAS3-220ENST00000588720 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 NAP1L4Q99733 375 aaKnown RBP12.98□□□□□ -0.33
BCAS3-220ENST00000588720 RNF26Q9BY78 433 aaPredicted RBP12.98□□□□□ -0.33
BCAS3-220ENST00000588720 CBX8Q9HC52 389 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 WDR19Q8NEZ3 1342 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 SKILP12757 684 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 KRT25Q7Z3Z0 450 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 PPIP5K2O43314 1243 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 IFNAR1P17181 557 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 PLCD1P51178 756 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 SYCP1Q15431 976 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 DOK7Q18PE1 504 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 BRIP1Q9BX63 1249 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms