RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PIH1D3Q9NQM4 214 aaKnown RBP22.62■■□□□ 1.21
CCDC43-204ENST00000588687 DBNLQ9UJU6 430 aaKnown RBP22.62■■□□□ 1.21
CCDC43-204ENST00000588687 LAMA2P24043 3122 aaKnown RBP22.62■■□□□ 1.21
CCDC43-204ENST00000588687 MYH1P12882 1939 aa22.62■■□□□ 1.21
CCDC43-204ENST00000588687 A0A0C4DFX4 3053 aa22.61■■□□□ 1.21
CCDC43-204ENST00000588687 PLCG2P16885 1265 aa22.61■■□□□ 1.21
CCDC43-204ENST00000588687 TTC39AQ5SRH9 613 aa22.61■■□□□ 1.21
CCDC43-204ENST00000588687 MAP3K21Q5TCX8 1036 aa22.61■■□□□ 1.21
CCDC43-204ENST00000588687 POTEEQ6S8J3 1075 aa22.61■■□□□ 1.21
CCDC43-204ENST00000588687 TLR7Q9NYK1 1049 aaKnown RBP22.61■■□□□ 1.21
CCDC43-204ENST00000588687 ZBTB21Q9ULJ3 1066 aa22.61■■□□□ 1.21
CCDC43-204ENST00000588687 A0A1W2PPC1 479 aa22.6■■□□□ 1.21
CCDC43-204ENST00000588687 EVI5O60447 810 aa22.6■■□□□ 1.21
CCDC43-204ENST00000588687 BAG3O95817 575 aa22.6■■□□□ 1.21
CCDC43-204ENST00000588687 ZAP70P43403 619 aa22.6■■□□□ 1.21
CCDC43-204ENST00000588687 ANKLE1Q8NAG6 615 aa22.6■■□□□ 1.21
CCDC43-204ENST00000588687 PALD1Q9ULE6 856 aa22.6■■□□□ 1.21
CCDC43-204ENST00000588687 FRMPD3Q5JV73 1810 aa22.59■■□□□ 1.21
CCDC43-204ENST00000588687 IGSF3O75054 1194 aa22.59■■□□□ 1.21
CCDC43-204ENST00000588687 GDF11O95390 407 aa22.59■■□□□ 1.21
CCDC43-204ENST00000588687 HERVK_113P62684 666 aa22.59■■□□□ 1.21
CCDC43-204ENST00000588687 ATP8B2P98198 1209 aa22.59■■□□□ 1.21
CCDC43-204ENST00000588687 P2RX7Q99572 595 aaKnown RBP22.59■■□□□ 1.21
CCDC43-204ENST00000588687 NOL10Q9BSC4 688 aaKnown RBP22.59■■□□□ 1.21
CCDC43-204ENST00000588687 C1orf115Q9H7X2 142 aa22.59■■□□□ 1.21
CCDC43-204ENST00000588687 NOP58Q9Y2X3 529 aaKnown RBP22.59■■□□□ 1.21
CCDC43-204ENST00000588687 RPTORQ8N122 1335 aa22.58■■□□□ 1.21
CCDC43-204ENST00000588687 SOX1O00570 391 aaPredicted RBP22.58■■□□□ 1.21
CCDC43-204ENST00000588687 IRX3P78415 501 aaPredicted RBP22.58■■□□□ 1.21
CCDC43-204ENST00000588687 CCDC158Q5M9N0 1113 aa22.58■■□□□ 1.21
CCDC43-204ENST00000588687 ZKSCAN2Q63HK3 967 aa22.58■■□□□ 1.21
CCDC43-204ENST00000588687 NECAB2Q7Z6G3 386 aa22.58■■□□□ 1.21
CCDC43-204ENST00000588687 FOXP4Q8IVH2 680 aaPredicted RBP22.58■■□□□ 1.21
CCDC43-204ENST00000588687 GINM1Q9NU53 330 aa22.58■■□□□ 1.21
CCDC43-204ENST00000588687 DYNLL1P63167 89 aaKnown RBP22.57■■□□□ 1.2
CCDC43-204ENST00000588687 USP6NLQ92738 828 aa22.57■■□□□ 1.2
CCDC43-204ENST00000588687 RBPJLQ9UBG7 517 aa22.57■■□□□ 1.2
CCDC43-204ENST00000588687 C19orf81C9J6K1 198 aa22.56■■□□□ 1.2
CCDC43-204ENST00000588687 USP17L10C9JJH3 530 aa22.56■■□□□ 1.2
CCDC43-204ENST00000588687 RLBP1P12271 317 aa22.56■■□□□ 1.2
CCDC43-204ENST00000588687 HMX1Q9NP08 348 aaPredicted RBP22.56■■□□□ 1.2
CCDC43-204ENST00000588687 EMILIN3Q9NT22 766 aa22.56■■□□□ 1.2
CCDC43-204ENST00000588687 TMOD4Q9NZQ9 345 aa22.56■■□□□ 1.2
CCDC43-204ENST00000588687 SAP30BPQ9UHR5 308 aaKnown RBP22.56■■□□□ 1.2
CCDC43-204ENST00000588687 OGDHLQ9ULD0 1010 aa22.56■■□□□ 1.2
CCDC43-204ENST00000588687 SURF6O75683 361 aaKnown RBP22.55■■□□□ 1.2
CCDC43-204ENST00000588687 XRCC5P13010 732 aaKnown RBP22.55■■□□□ 1.2
CCDC43-204ENST00000588687 CRACR2BQ8N4Y2 399 aaPredicted RBP22.55■■□□□ 1.2
CCDC43-204ENST00000588687 SOCS4Q8WXH5 440 aa22.55■■□□□ 1.2
CCDC43-204ENST00000588687 EAF2Q96CJ1 260 aaPredicted RBP22.55■■□□□ 1.2
CCDC43-204ENST00000588687 GDF15Q99988 308 aa22.55■■□□□ 1.2
CCDC43-204ENST00000588687 PORCNQ9H237 461 aa22.55■■□□□ 1.2
CCDC43-204ENST00000588687 STAP2Q9UGK3 403 aa22.55■■□□□ 1.2
CCDC43-204ENST00000588687 NAV1Q8NEY1 1877 aa22.54■■□□□ 1.2
CCDC43-204ENST00000588687 ERVK-9P63128 1117 aa22.54■■□□□ 1.2
CCDC43-204ENST00000588687 ERVK-24P63145 666 aa22.54■■□□□ 1.2
CCDC43-204ENST00000588687 OS9Q13438 667 aaPredicted RBP22.54■■□□□ 1.2
CCDC43-204ENST00000588687 Q3C1V9 767 aa22.54■■□□□ 1.2
CCDC43-204ENST00000588687 GPRC5AQ8NFJ5 357 aa22.54■■□□□ 1.2
CCDC43-204ENST00000588687 C12orf42Q96LP6 360 aa22.54■■□□□ 1.2
CCDC43-204ENST00000588687 PFASO15067 1338 aa22.54■■□□□ 1.2
CCDC43-204ENST00000588687 PRKAR2AP13861 404 aaKnown RBP22.53■■□□□ 1.2
CCDC43-204ENST00000588687 CYP2B6P20813 491 aa22.53■■□□□ 1.2
CCDC43-204ENST00000588687 CYP7A1P22680 504 aa22.53■■□□□ 1.2
CCDC43-204ENST00000588687 MORN1Q5T089 497 aa22.53■■□□□ 1.2
CCDC43-204ENST00000588687 TATDN1Q6P1N9 297 aa22.53■■□□□ 1.2
CCDC43-204ENST00000588687 LRCH3Q96II8 777 aa22.53■■□□□ 1.2
CCDC43-204ENST00000588687 NBPF3Q9H094 633 aa22.53■■□□□ 1.2
CCDC43-204ENST00000588687 CCDC8Q9H0W5 538 aaPredicted RBP22.53■■□□□ 1.2
CCDC43-204ENST00000588687 NDUFB9Q9Y6M9 179 aa22.53■■□□□ 1.2
CCDC43-204ENST00000588687 GH2P01242 217 aa22.52■■□□□ 1.2
CCDC43-204ENST00000588687 HLA-DOAP06340 250 aa22.52■■□□□ 1.2
CCDC43-204ENST00000588687 MAPK4P31152 587 aa22.52■■□□□ 1.2
CCDC43-204ENST00000588687 C7orf61Q8IZ16 206 aa22.52■■□□□ 1.2
CCDC43-204ENST00000588687 MIGA1Q8NAN2 632 aa22.52■■□□□ 1.2
CCDC43-204ENST00000588687 NUDT12Q9BQG2 462 aa22.52■■□□□ 1.2
CCDC43-204ENST00000588687 EHD4Q9H223 541 aa22.52■■□□□ 1.2
CCDC43-204ENST00000588687 A0A0G2JMZ2 1700 aa22.51■■□□□ 1.19
CCDC43-204ENST00000588687 UNC80Q8N2C7 3258 aa22.51■■□□□ 1.19
CCDC43-204ENST00000588687 CNMDO75829 334 aa22.51■■□□□ 1.19
CCDC43-204ENST00000588687 BMP8BP34820 402 aa22.51■■□□□ 1.19
CCDC43-204ENST00000588687 GPR142Q7Z601 462 aa22.51■■□□□ 1.19
CCDC43-204ENST00000588687 GTF3C2Q8WUA4 911 aaPredicted RBP22.51■■□□□ 1.19
CCDC43-204ENST00000588687 TRIM34Q9BYJ4 488 aa22.51■■□□□ 1.19
CCDC43-204ENST00000588687 ANTXR1Q9H6X2 564 aa22.51■■□□□ 1.19
CCDC43-204ENST00000588687 IDH1O75874 414 aaKnown RBP22.5■■□□□ 1.19
CCDC43-204ENST00000588687 COL6A1P12109 1028 aa22.5■■□□□ 1.19
CCDC43-204ENST00000588687 CACNB2Q08289 660 aaPredicted RBP22.5■■□□□ 1.19
CCDC43-204ENST00000588687 CCL14Q16627 93 aa22.5■■□□□ 1.19
CCDC43-204ENST00000588687 CEP85Q6P2H3 762 aa22.5■■□□□ 1.19
CCDC43-204ENST00000588687 USP17L2Q6R6M4 530 aa22.5■■□□□ 1.19
CCDC43-204ENST00000588687 C11orf49Q9H6J7 331 aa22.5■■□□□ 1.19
CCDC43-204ENST00000588687 ZMYND8Q9ULU4 1186 aaPredicted RBP22.5■■□□□ 1.19
CCDC43-204ENST00000588687 ZKSCAN1P17029 563 aaPredicted RBP22.49■■□□□ 1.19
CCDC43-204ENST00000588687 LHX8Q68G74 356 aa22.49■■□□□ 1.19
CCDC43-204ENST00000588687 MAGEB6Q8N7X4 407 aa22.49■■□□□ 1.19
CCDC43-204ENST00000588687 APBA2Q99767 749 aa22.49■■□□□ 1.19
CCDC43-204ENST00000588687 RIOK1Q9BRS2 568 aaKnown RBP22.49■■□□□ 1.19
CCDC43-204ENST00000588687 SERPINB13Q9UIV8 391 aa22.49■■□□□ 1.19
CCDC43-204ENST00000588687 ZNF236Q9UL36 1845 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms