RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 PTPRAP18433 802 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 CHMLP26374 656 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 INHBEP58166 350 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 GABPAQ06546 454 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 PDE4BQ07343 736 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 ABCB5Q2M3G0 1257 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 OTUD7BQ6GQQ9 843 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 C16orf86Q6ZW13 317 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 MKNK2Q9HBH9 465 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 ZBTB21Q9ULJ3 1066 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 ZHX2Q9Y6X8 837 aa14.14□□□□□ -0.15
SDHDP1-201ENST00000588055 LAMA4Q16363 1823 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 PCNTO95613 3336 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 USP17L5A8MUK1 530 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 CA12O43570 354 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 CDC45O75419 566 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 CETPP11597 493 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 SHMT1P34896 483 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 PPARAQ07869 468 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 RAB3GAP1Q15042 981 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 VPS53Q5VIR6 699 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 TATDN1Q6P1N9 297 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 KIAA1211Q6ZU35 1233 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 DYNLL2Q96FJ2 89 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 CCDC17Q96LX7 622 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 DSCC1Q9BVC3 393 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 CTNNA3Q9UI47 895 aa14.13□□□□□ -0.15
SDHDP1-201ENST00000588055 CCL15-CCL14A0A0B4J2E2 113 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 TRIM75PA6NK02 468 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 IRF6O14896 467 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 ALDH1A1P00352 501 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 GH2P01242 217 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 CDK8P49336 464 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 ALX1Q15699 326 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 CCL15Q16663 113 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 TMEM179Q6ZVK1 233 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 SLC44A5Q8NCS7 719 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 FEZ1Q99689 392 aa14.12□□□□□ -0.15
SDHDP1-201ENST00000588055 CXCL11O14625 94 aa14.11□□□□□ -0.15
SDHDP1-201ENST00000588055 GJA5P36382 358 aa14.11□□□□□ -0.15
SDHDP1-201ENST00000588055 IMMTQ16891 758 aaKnown RBP14.11□□□□□ -0.15
SDHDP1-201ENST00000588055 STK11IPQ8N1F8 1099 aa14.11□□□□□ -0.15
SDHDP1-201ENST00000588055 ZNF280CQ8ND82 737 aa14.11□□□□□ -0.15
SDHDP1-201ENST00000588055 SH2D4AQ9H788 454 aa14.11□□□□□ -0.15
SDHDP1-201ENST00000588055 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
SDHDP1-201ENST00000588055 PHIPQ8WWQ0 1821 aa14.11□□□□□ -0.15
SDHDP1-201ENST00000588055 ZNF213O14771 459 aa14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 SGSM2O43147 1006 aa14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 FGAP02671 866 aa14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 HSPA1AP0DMV8 641 aaKnown RBP14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 HSPA1BP0DMV9 641 aaKnown RBP14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 PCP11498 1178 aaKnown RBP14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 EVX2Q03828 476 aa14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 FASTKD5Q7L8L6 764 aaKnown RBP14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 ZNF444Q8N0Y2 327 aaPredicted RBP14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 RNF41Q9H4P4 317 aaPredicted RBP14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 SAGE1Q9NXZ1 904 aa14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 KCNH4Q9UQ05 1017 aa14.1□□□□□ -0.15
SDHDP1-201ENST00000588055 FOXP2O15409 715 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 TSPY3P0CV98 308 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 TSPY8P0CW00 308 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 TM4SF4P48230 202 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 ICA1Q05084 483 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 SPP2Q13103 211 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 RRP1BQ14684 758 aaKnown RBP14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 PPP4R3BQ5MIZ7 849 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 GADL1Q6ZQY3 521 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 IFNL1Q8IU54 200 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 ZIC5Q96T25 663 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 ESYT1Q9BSJ8 1104 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 WDR18Q9BV38 432 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 ARHGEF10LQ9HCE6 1279 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 WBP1LQ9NX94 342 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 TMOD4Q9NZQ9 345 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 ANAPC4Q9UJX5 808 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 AFG3L2Q9Y4W6 797 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 U3KPZ7 1027 aaPredicted RBP14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 PTPRFP10586 1907 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 LOC285556D6RIA3 1793 aa14.09□□□□□ -0.15
SDHDP1-201ENST00000588055 A0A0G2JLL6 359 aaPredicted RBP14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 USP17L10C9JJH3 530 aa14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 PRDM1O75626 825 aa14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 AKR1B1P15121 316 aa14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 USP14P54578 494 aa14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 HAND2P61296 217 aa14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 CTDSPL2Q05D32 466 aa14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 PABPC4Q13310 644 aaKnown RBP eCLIP14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 MTMR2Q13614 643 aa14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 PRRT2Q7Z6L0 340 aaPredicted RBP14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 CCDC84Q86UT8 332 aaPredicted RBP14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 BRI3BPQ8WY22 251 aa14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 MS4A4AQ96JQ5 239 aa14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 ZCCHC17Q9NP64 241 aaKnown RBP14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 ANO2Q9NQ90 1003 aa14.08□□□□□ -0.16
SDHDP1-201ENST00000588055 TESPA1A2RU30 521 aaPredicted RBP14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 TSPY2A6NKD2 308 aa14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 C19orf81C9J6K1 198 aa14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 RASA1P20936 1047 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms