RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
NCLN-203ENST00000587740 C11orf49Q9H6J7 331 aa19.17■□□□□ 0.66
NCLN-203ENST00000587740 AKAP2Q9Y2D5 859 aa19.17■□□□□ 0.66
NCLN-203ENST00000587740 UNC80Q8N2C7 3258 aa19.17■□□□□ 0.66
NCLN-203ENST00000587740 LAMA2P24043 3122 aaKnown RBP19.16■□□□□ 0.66
NCLN-203ENST00000587740 MAP3K21Q5TCX8 1036 aa19.16■□□□□ 0.66
NCLN-203ENST00000587740 TBC1D9Q6ZT07 1266 aa19.16■□□□□ 0.66
NCLN-203ENST00000587740 NSUN4Q96CB9 384 aaKnown RBP19.16■□□□□ 0.66
NCLN-203ENST00000587740 MTMR10Q9NXD2 777 aa19.16■□□□□ 0.66
NCLN-203ENST00000587740 HMG20BQ9P0W2 317 aa19.16■□□□□ 0.66
NCLN-203ENST00000587740 MORF4L1Q9UBU8 362 aa19.16■□□□□ 0.66
NCLN-203ENST00000587740 PFASO15067 1338 aa19.16■□□□□ 0.66
NCLN-203ENST00000587740 DNAH12Q6ZR08 3092 aa19.16■□□□□ 0.66
NCLN-203ENST00000587740 COL2A1P02458 1487 aaPredicted RBP19.16■□□□□ 0.66
NCLN-203ENST00000587740 USP17L5A8MUK1 530 aa19.15■□□□□ 0.66
NCLN-203ENST00000587740 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
NCLN-203ENST00000587740 CYP2B6P20813 491 aa19.15■□□□□ 0.66
NCLN-203ENST00000587740 JAG1P78504 1218 aa19.15■□□□□ 0.66
NCLN-203ENST00000587740 PABPC4Q13310 644 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■■□□ 15.6
NCLN-203ENST00000587740 ERC1Q8IUD2 1116 aa19.15■□□□□ 0.66
NCLN-203ENST00000587740 TXNRD2Q9NNW7 524 aa19.15■□□□□ 0.66
NCLN-203ENST00000587740 EXOC6BQ9Y2D4 811 aa19.15■□□□□ 0.66
NCLN-203ENST00000587740 SIPA1L1O43166 1804 aa19.14■□□□□ 0.65
NCLN-203ENST00000587740 TDHQ8IZJ6 230 aa19.14■□□□□ 0.65
NCLN-203ENST00000587740 EXOC6Q8TAG9 804 aa19.14■□□□□ 0.65
NCLN-203ENST00000587740 P2RX7Q99572 595 aaKnown RBP19.14■□□□□ 0.65
NCLN-203ENST00000587740 TBC1D2Q9BYX2 928 aa19.14■□□□□ 0.65
NCLN-203ENST00000587740 STXBP5LQ9Y2K9 1186 aa19.14■□□□□ 0.65
NCLN-203ENST00000587740 PRKAR2AP13861 404 aaKnown RBP19.13■□□□□ 0.65
NCLN-203ENST00000587740 IRX6P78412 446 aaPredicted RBP19.13■□□□□ 0.65
NCLN-203ENST00000587740 SHROOM1Q2M3G4 852 aaPredicted RBP19.13■□□□□ 0.65
NCLN-203ENST00000587740 WDR18Q9BV38 432 aa19.13■□□□□ 0.65
NCLN-203ENST00000587740 PCDHB15Q9Y5E8 787 aa19.13■□□□□ 0.65
NCLN-203ENST00000587740 MAP4K4O95819 1239 aaPredicted RBP19.12■□□□□ 0.65
NCLN-203ENST00000587740 LDHCP07864 332 aa19.12■□□□□ 0.65
NCLN-203ENST00000587740 COL6A1P12109 1028 aa19.12■□□□□ 0.65
NCLN-203ENST00000587740 HOXA7P31268 230 aaPredicted RBP19.12■□□□□ 0.65
NCLN-203ENST00000587740 MTMR2Q13614 643 aa19.12■□□□□ 0.65
NCLN-203ENST00000587740 POTEEQ6S8J3 1075 aa19.12■□□□□ 0.65
NCLN-203ENST00000587740 SPATA5Q8NB90 893 aa19.12■□□□□ 0.65
NCLN-203ENST00000587740 NEUROD6Q96NK8 337 aa19.12■□□□□ 0.65
NCLN-203ENST00000587740 UBE2OQ9C0C9 1292 aaKnown RBP19.12■□□□□ 0.65
NCLN-203ENST00000587740 GPR108Q9NPR9 543 aa19.12■□□□□ 0.65
NCLN-203ENST00000587740 RAB11FIP3O75154 756 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 XRCC5P13010 732 aaKnown RBP19.11■□□□□ 0.65
NCLN-203ENST00000587740 BACE1P56817 501 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 IRX3P78415 501 aaPredicted RBP19.11■□□□□ 0.65
NCLN-203ENST00000587740 GSTO1P78417 241 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 CACNB2Q08289 660 aaPredicted RBP19.11■□□□□ 0.65
NCLN-203ENST00000587740 Q3C1V9 767 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 LHX8Q68G74 356 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 TEX11Q8IYF3 940 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 SH3RF3Q8TEJ3 882 aaPredicted RBP19.11■□□□□ 0.65
NCLN-203ENST00000587740 USP6NLQ92738 828 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 NUDT12Q9BQG2 462 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 DNAJC18Q9H819 358 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 AS3MTQ9HBK9 375 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 RBPJLQ9UBG7 517 aa19.11■□□□□ 0.65
NCLN-203ENST00000587740 HERC5Q9UII4 1024 aaKnown RBP19.11■□□□□ 0.65
NCLN-203ENST00000587740 APBB1O00213 710 aa19.1■□□□□ 0.65
NCLN-203ENST00000587740 ARID4AP29374 1257 aaPredicted RBP19.1■□□□□ 0.65
NCLN-203ENST00000587740 HERVK_113P62684 666 aa19.1■□□□□ 0.65
NCLN-203ENST00000587740 GPRC5AQ8NFJ5 357 aa19.1■□□□□ 0.65
NCLN-203ENST00000587740 KIF1BPQ96EK5 621 aa19.1■□□□□ 0.65
NCLN-203ENST00000587740 RAI14Q9P0K7 980 aa19.1■□□□□ 0.65
NCLN-203ENST00000587740 CCND3P30281 292 aaPredicted RBP19.09■□□□□ 0.65
NCLN-203ENST00000587740 MCAMP43121 646 aa19.09■□□□□ 0.65
NCLN-203ENST00000587740 CCL14Q16627 93 aa19.09■□□□□ 0.65
NCLN-203ENST00000587740 LRRC26Q2I0M4 334 aa19.09■□□□□ 0.65
NCLN-203ENST00000587740 TNNI3KQ59H18 835 aa19.09■□□□□ 0.65
NCLN-203ENST00000587740 GORABQ5T7V8 394 aa19.09■□□□□ 0.65
NCLN-203ENST00000587740 RHPN1Q8TCX5 695 aa19.09■□□□□ 0.65
NCLN-203ENST00000587740 PORCNQ9H237 461 aa19.09■□□□□ 0.65
NCLN-203ENST00000587740 PI4KBQ9UBF8 816 aa19.09■□□□□ 0.65
NCLN-203ENST00000587740 FPGT-TNNI3KV9GXZ4 949 aa19.09■□□□□ 0.65
NCLN-203ENST00000587740 SOCS4Q8WXH5 440 aa19.08■□□□□ 0.64
NCLN-203ENST00000587740 DCTPP1Q9H773 170 aa19.08■□□□□ 0.64
NCLN-203ENST00000587740 ASNSP08243 561 aa19.07■□□□□ 0.64
NCLN-203ENST00000587740 ZKSCAN1P17029 563 aaPredicted RBP19.07■□□□□ 0.64
NCLN-203ENST00000587740 MORN1Q5T089 497 aa19.07■□□□□ 0.64
NCLN-203ENST00000587740 METTL16Q86W50 562 aaKnown RBP19.07■□□□□ 0.64
NCLN-203ENST00000587740 TMOD4Q9NZQ9 345 aa19.07■□□□□ 0.64
NCLN-203ENST00000587740 CDK5RAP2Q96SN8 1893 aa19.07■□□□□ 0.64
NCLN-203ENST00000587740 C19orf81C9J6K1 198 aa19.06■□□□□ 0.64
NCLN-203ENST00000587740 USP17L10C9JJH3 530 aa19.06■□□□□ 0.64
NCLN-203ENST00000587740 GDF11O95390 407 aa19.06■□□□□ 0.64
NCLN-203ENST00000587740 MAPK4P31152 587 aa19.06■□□□□ 0.64
NCLN-203ENST00000587740 ERVK-9P63128 1117 aa19.06■□□□□ 0.64
NCLN-203ENST00000587740 ERVK-24P63145 666 aa19.06■□□□□ 0.64
NCLN-203ENST00000587740 MDM2Q00987 491 aaPredicted RBP19.06■□□□□ 0.64
NCLN-203ENST00000587740 GPR142Q7Z601 462 aa19.06■□□□□ 0.64
NCLN-203ENST00000587740 CLASRPQ8N2M8 674 aaKnown RBP19.06■□□□□ 0.64
NCLN-203ENST00000587740 DHX36Q9H2U1 1008 aaKnown RBP19.06■□□□□ 0.64
NCLN-203ENST00000587740 IL1RAPL2Q9NP60 686 aa19.06■□□□□ 0.64
NCLN-203ENST00000587740 EMILIN3Q9NT22 766 aa19.06■□□□□ 0.64
NCLN-203ENST00000587740 AATFQ9NY61 560 aaKnown RBP eCLIP19.06■□□□□ 0.64
NCLN-203ENST00000587740 POTEB2H3BUK9 544 aa19.05■□□□□ 0.64
NCLN-203ENST00000587740 HDAC1Q13547 482 aaPredicted RBP19.05■□□□□ 0.64
NCLN-203ENST00000587740 ADGRA1Q86SQ6 560 aa19.05■□□□□ 0.64
NCLN-203ENST00000587740 MAPKAPK5Q8IW41 473 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms