RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 FLT1P17948 1338 aa17.22■□□□□ 0.35
DNMT1-213ENST00000587604 PLXNB2O15031 1838 aa17.22■□□□□ 0.35
DNMT1-213ENST00000587604 ALPK3Q96L96 1907 aa17.22■□□□□ 0.35
DNMT1-213ENST00000587604 A0A1W2PPC1 479 aa17.22■□□□□ 0.35
DNMT1-213ENST00000587604 SURF6O75683 361 aaKnown RBP17.22■□□□□ 0.35
DNMT1-213ENST00000587604 JAG1P78504 1218 aa17.22■□□□□ 0.35
DNMT1-213ENST00000587604 OS9Q13438 667 aaPredicted RBP17.22■□□□□ 0.35
DNMT1-213ENST00000587604 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
DNMT1-213ENST00000587604 CRACR2BQ8N4Y2 399 aaPredicted RBP17.22■□□□□ 0.35
DNMT1-213ENST00000587604 P2RX7Q99572 595 aaKnown RBP17.22■□□□□ 0.35
DNMT1-213ENST00000587604 TRIM34Q9BYJ4 488 aa17.22■□□□□ 0.35
DNMT1-213ENST00000587604 DNAJC18Q9H819 358 aa17.22■□□□□ 0.35
DNMT1-213ENST00000587604 HMX1Q9NP08 348 aaPredicted RBP17.22■□□□□ 0.35
DNMT1-213ENST00000587604 PALD1Q9ULE6 856 aa17.22■□□□□ 0.35
DNMT1-213ENST00000587604 MAST2Q6P0Q8 1798 aa17.22■□□□□ 0.35
DNMT1-213ENST00000587604 USP17L10C9JJH3 530 aa17.21■□□□□ 0.35
DNMT1-213ENST00000587604 GPRC5AQ8NFJ5 357 aa17.21■□□□□ 0.35
DNMT1-213ENST00000587604 DIS3LQ8TF46 1054 aaKnown RBP17.21■□□□□ 0.35
DNMT1-213ENST00000587604 XRCC5P13010 732 aaKnown RBP17.2■□□□□ 0.34
DNMT1-213ENST00000587604 ZAP70P43403 619 aa17.2■□□□□ 0.34
DNMT1-213ENST00000587604 HERVK_113P62684 666 aa17.2■□□□□ 0.34
DNMT1-213ENST00000587604 TRIM32Q13049 653 aa17.2■□□□□ 0.34
DNMT1-213ENST00000587604 NUDT12Q9BQG2 462 aa17.2■□□□□ 0.34
DNMT1-213ENST00000587604 TXNRD2Q9NNW7 524 aa17.2■□□□□ 0.34
DNMT1-213ENST00000587604 STAP2Q9UGK3 403 aa17.2■□□□□ 0.34
DNMT1-213ENST00000587604 NOP58Q9Y2X3 529 aaKnown RBP17.2■□□□□ 0.34
DNMT1-213ENST00000587604 GDF11O95390 407 aa17.19■□□□□ 0.34
DNMT1-213ENST00000587604 HLA-DOAP06340 250 aa17.19■□□□□ 0.34
DNMT1-213ENST00000587604 CYP2B6P20813 491 aa17.19■□□□□ 0.34
DNMT1-213ENST00000587604 TRIB2Q92519 343 aa17.19■□□□□ 0.34
DNMT1-213ENST00000587604 NBPF3Q9H094 633 aa17.19■□□□□ 0.34
DNMT1-213ENST00000587604 PIH1D3Q9NQM4 214 aaKnown RBP17.19■□□□□ 0.34
DNMT1-213ENST00000587604 RBPJLQ9UBG7 517 aa17.19■□□□□ 0.34
DNMT1-213ENST00000587604 ZBTB21Q9ULJ3 1066 aa17.19■□□□□ 0.34
DNMT1-213ENST00000587604 MYH1P12882 1939 aa17.19■□□□□ 0.34
DNMT1-213ENST00000587604 CYP7A1P22680 504 aa17.18■□□□□ 0.34
DNMT1-213ENST00000587604 SHROOM1Q2M3G4 852 aaPredicted RBP17.18■□□□□ 0.34
DNMT1-213ENST00000587604 MAP3K21Q5TCX8 1036 aa17.18■□□□□ 0.34
DNMT1-213ENST00000587604 GTF3C2Q8WUA4 911 aaPredicted RBP17.18■□□□□ 0.34
DNMT1-213ENST00000587604 SOCS4Q8WXH5 440 aa17.18■□□□□ 0.34
DNMT1-213ENST00000587604 SAP30BPQ9UHR5 308 aaKnown RBP17.18■□□□□ 0.34
DNMT1-213ENST00000587604 DBNLQ9UJU6 430 aaKnown RBP17.18■□□□□ 0.34
DNMT1-213ENST00000587604 OGDHLQ9ULD0 1010 aa17.18■□□□□ 0.34
DNMT1-213ENST00000587604 PEX10O60683 326 aa17.17■□□□□ 0.34
DNMT1-213ENST00000587604 MAPK4P31152 587 aa17.17■□□□□ 0.34
DNMT1-213ENST00000587604 MNX1P50219 401 aaPredicted RBP17.17■□□□□ 0.34
DNMT1-213ENST00000587604 DYNLL1P63167 89 aaKnown RBP17.17■□□□□ 0.34
DNMT1-213ENST00000587604 Q3C1V9 767 aa17.17■□□□□ 0.34
DNMT1-213ENST00000587604 USP17L2Q6R6M4 530 aa17.17■□□□□ 0.34
DNMT1-213ENST00000587604 CERS3Q8IU89 383 aa17.17■□□□□ 0.34
DNMT1-213ENST00000587604 TRMT44Q8IYL2 757 aaKnown RBP17.17■□□□□ 0.34
DNMT1-213ENST00000587604 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
DNMT1-213ENST00000587604 EMILIN3Q9NT22 766 aa17.17■□□□□ 0.34
DNMT1-213ENST00000587604 PRKAR2AP13861 404 aaKnown RBP17.16■□□□□ 0.34
DNMT1-213ENST00000587604 BMP8BP34820 402 aa17.16■□□□□ 0.34
DNMT1-213ENST00000587604 ERVK-9P63128 1117 aa17.16■□□□□ 0.34
DNMT1-213ENST00000587604 ERVK-24P63145 666 aa17.16■□□□□ 0.34
DNMT1-213ENST00000587604 PDE3AQ14432 1141 aa17.16■□□□□ 0.34
DNMT1-213ENST00000587604 TATDN1Q6P1N9 297 aa17.16■□□□□ 0.34
DNMT1-213ENST00000587604 CCAR1Q8IX12 1150 aaKnown RBP17.16■□□□□ 0.34
DNMT1-213ENST00000587604 USP6NLQ92738 828 aa17.16■□□□□ 0.34
DNMT1-213ENST00000587604 EAF2Q96CJ1 260 aaPredicted RBP17.16■□□□□ 0.34
DNMT1-213ENST00000587604 GDF15Q99988 308 aa17.16■□□□□ 0.34
DNMT1-213ENST00000587604 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
DNMT1-213ENST00000587604 C11orf49Q9H6J7 331 aa17.16■□□□□ 0.34
DNMT1-213ENST00000587604 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
DNMT1-213ENST00000587604 GH2P01242 217 aa17.15■□□□□ 0.34
DNMT1-213ENST00000587604 USP5P45974 858 aa17.15■□□□□ 0.34
DNMT1-213ENST00000587604 TMED8Q6PL24 325 aaPredicted RBP17.15■□□□□ 0.34
DNMT1-213ENST00000587604 GPR142Q7Z601 462 aa17.15■□□□□ 0.34
DNMT1-213ENST00000587604 FTSJ3Q8IY81 847 aaKnown RBP17.15■□□□□ 0.34
DNMT1-213ENST00000587604 C7orf61Q8IZ16 206 aa17.15■□□□□ 0.34
DNMT1-213ENST00000587604 TLR7Q9NYK1 1049 aaKnown RBP17.15■□□□□ 0.34
DNMT1-213ENST00000587604 DDX60LQ5H9U9 1706 aaKnown RBP17.15■□□□□ 0.34
DNMT1-213ENST00000587604 SOX1O00570 391 aaPredicted RBP17.14■□□□□ 0.33
DNMT1-213ENST00000587604 ZKSCAN1P17029 563 aaPredicted RBP17.14■□□□□ 0.33
DNMT1-213ENST00000587604 RGS2P41220 211 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 MORN1Q5T089 497 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 POTEEQ6S8J3 1075 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 PLEKHH3Q7Z736 793 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 ITPRIPQ8IWB1 547 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 MAGEB6Q8N7X4 407 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 MIGA1Q8NAN2 632 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 C12orf42Q96LP6 360 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 PAGR1Q9BTK6 254 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 EHD4Q9H223 541 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 PORCNQ9H237 461 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 SERPINB13Q9UIV8 391 aa17.14■□□□□ 0.33
DNMT1-213ENST00000587604 USP17L15C9J2P7 530 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 USP17L13C9JLJ4 530 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 USP17L11C9JVI0 530 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 USP17L18D6R9N7 530 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 USP17L22D6RA61 530 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 USP17L17D6RBQ6 530 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 USP17L19D6RCP7 530 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 USP17L20D6RJB6 530 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 CACNB2Q08289 660 aaPredicted RBP17.13■□□□□ 0.33
DNMT1-213ENST00000587604 USP17L24Q0WX57 530 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 MAP3K12Q12852 859 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 TTC6Q86TZ1 520 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms