RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 DNAJC18Q9H819 358 aa16.82■□□□□ 0.28
TPM4-205ENST00000586833 ZBTB21Q9ULJ3 1066 aa16.82■□□□□ 0.28
TPM4-205ENST00000586833 RAD50Q92878 1312 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 FOXN1O15353 648 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 GDF11O95390 407 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 PABPC4Q13310 644 aaKnown RBP eCLIP16.81■□□□□ 0.28
TPM4-205ENST00000586833 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 CWC27Q6UX04 472 aaKnown RBP16.81■□□□□ 0.28
TPM4-205ENST00000586833 C16orf86Q6ZW13 317 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 MS4A4AQ96JQ5 239 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 FAM227BQ96M60 508 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 WDR18Q9BV38 432 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 ZFYVE28Q9HCC9 887 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 PRDM10Q9NQV6 1147 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 TMOD4Q9NZQ9 345 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 AFG3L2Q9Y4W6 797 aa16.81■□□□□ 0.28
TPM4-205ENST00000586833 A0A0D9SFI3 127 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 TRIM75PA6NK02 468 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 GH2P01242 217 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 CYP2D6P10635 497 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 GSPT1P15170 499 aaKnown RBP16.8■□□□□ 0.28
TPM4-205ENST00000586833 SHMT1P34896 483 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 CDK8P49336 464 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 RAB3GAP1Q15042 981 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 CCDC129Q6ZRS4 1044 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 TMEM179Q6ZVK1 233 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 ANKRD23Q86SG2 305 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 ZNF444Q8N0Y2 327 aaPredicted RBP16.8■□□□□ 0.28
TPM4-205ENST00000586833 BRI3BPQ8WY22 251 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 FEZ1Q99689 392 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 SH2D4AQ9H788 454 aa16.8■□□□□ 0.28
TPM4-205ENST00000586833 A0A0G2JLL6 359 aaPredicted RBP16.79■□□□□ 0.28
TPM4-205ENST00000586833 C19orf81C9J6K1 198 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 SLURP2P0DP57 97 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 HSPA8P11142 646 aaKnown RBP16.79■□□□□ 0.28
TPM4-205ENST00000586833 USP14P54578 494 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 SPP2Q13103 211 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 ALX1Q15699 326 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 PPP4R3BQ5MIZ7 849 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 GADL1Q6ZQY3 521 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 PRRT2Q7Z6L0 340 aaPredicted RBP16.79■□□□□ 0.28
TPM4-205ENST00000586833 PROCA1Q8NCQ7 364 aaPredicted RBP16.79■□□□□ 0.28
TPM4-205ENST00000586833 CFHR5Q9BXR6 569 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 CTNNA3Q9UI47 895 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 PNMA3Q9UL41 463 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 CEP350Q5VT06 3117 aa16.79■□□□□ 0.28
TPM4-205ENST00000586833 USP17L10C9JJH3 530 aa16.78■□□□□ 0.28
TPM4-205ENST00000586833 LBX1P52954 281 aa16.78■□□□□ 0.28
TPM4-205ENST00000586833 PPARAQ07869 468 aa16.78■□□□□ 0.28
TPM4-205ENST00000586833 TAF1CQ15572 869 aaPredicted RBP16.78■□□□□ 0.28
TPM4-205ENST00000586833 NOM1Q5C9Z4 860 aaKnown RBP16.78■□□□□ 0.28
TPM4-205ENST00000586833 BMP2KLQ5H9B9 411 aa16.78■□□□□ 0.28
TPM4-205ENST00000586833 DYNLL2Q96FJ2 89 aa16.78■□□□□ 0.28
TPM4-205ENST00000586833 PARK7Q99497 189 aaKnown RBP16.78■□□□□ 0.28
TPM4-205ENST00000586833 ARHGEF10LQ9HCE6 1279 aa16.78■□□□□ 0.28
TPM4-205ENST00000586833 EPB41L4AQ9HCS5 686 aaPredicted RBP16.78■□□□□ 0.28
TPM4-205ENST00000586833 SLC45A1Q9Y2W3 748 aa16.78■□□□□ 0.28
TPM4-205ENST00000586833 ROBO3Q96MS0 1386 aa16.77■□□□□ 0.28
TPM4-205ENST00000586833 ZMYM6O95789 1325 aa16.77■□□□□ 0.28
TPM4-205ENST00000586833 CYP2D7A0A087X1C5 515 aa16.77■□□□□ 0.28
TPM4-205ENST00000586833 IGF2BP3O00425 579 aaKnown RBP eCLIP16.77■□□□□ 0.28
TPM4-205ENST00000586833 HSPD1P10809 573 aaKnown RBP16.77■□□□□ 0.28
TPM4-205ENST00000586833 OSBPP22059 807 aa16.77■□□□□ 0.28
TPM4-205ENST00000586833 NT5C2P49902 561 aa16.77■□□□□ 0.28
TPM4-205ENST00000586833 BACE1P56817 501 aa16.77■□□□□ 0.28
TPM4-205ENST00000586833 RRP1BQ14684 758 aaKnown RBP16.77■□□□□ 0.28
TPM4-205ENST00000586833 ARHGEF6Q15052 776 aa16.77■□□□□ 0.28
TPM4-205ENST00000586833 USP17L2Q6R6M4 530 aa16.77■□□□□ 0.28
TPM4-205ENST00000586833 BTBD19C9JJ37 291 aa16.76■□□□□ 0.27
TPM4-205ENST00000586833 PDHXO00330 501 aa16.76■□□□□ 0.27
TPM4-205ENST00000586833 PCP11498 1178 aaKnown RBP16.76■□□□□ 0.27
TPM4-205ENST00000586833 DSCC1Q9BVC3 393 aa16.76■□□□□ 0.27
TPM4-205ENST00000586833 RNF41Q9H4P4 317 aaPredicted RBP16.76■□□□□ 0.27
TPM4-205ENST00000586833 AGTPBP1Q9UPW5 1226 aa16.76■□□□□ 0.27
TPM4-205ENST00000586833 TBC1D8O95759 1140 aa16.75■□□□□ 0.27
TPM4-205ENST00000586833 CHMLP26374 656 aa16.75■□□□□ 0.27
TPM4-205ENST00000586833 ICA1Q05084 483 aa16.75■□□□□ 0.27
TPM4-205ENST00000586833 MTMR2Q13614 643 aa16.75■□□□□ 0.27
TPM4-205ENST00000586833 SH3D19Q5HYK7 790 aa16.75■□□□□ 0.27
TPM4-205ENST00000586833 KIAA1211Q6ZU35 1233 aa16.75■□□□□ 0.27
TPM4-205ENST00000586833 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
TPM4-205ENST00000586833 SLC44A5Q8NCS7 719 aa16.75■□□□□ 0.27
TPM4-205ENST00000586833 PTPN18Q99952 460 aa16.75■□□□□ 0.27
TPM4-205ENST00000586833 KANSL2Q9H9L4 492 aa16.75■□□□□ 0.27
TPM4-205ENST00000586833 TSKSQ9UJT2 592 aa16.75■□□□□ 0.27
TPM4-205ENST00000586833 AK9Q5TCS8 1911 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 GPR25O00155 361 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 ZNF213O14771 459 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 FGAP02671 866 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 TSPY3P0CV98 308 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 TSPY8P0CW00 308 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 HMGCS2P54868 508 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 IMMTQ16891 758 aaKnown RBP16.74■□□□□ 0.27
TPM4-205ENST00000586833 VPS53Q5VIR6 699 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 CCDC84Q86UT8 332 aaPredicted RBP16.74■□□□□ 0.27
TPM4-205ENST00000586833 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 FAM43AQ8N2R8 423 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 KIAA1683Q9H0B3 1180 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 ANAPC4Q9UJX5 808 aa16.74■□□□□ 0.27
TPM4-205ENST00000586833 FKTNO75072 461 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms