RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 DBNLQ9UJU6 430 aaKnown RBP18.33■□□□□ 0.52
VAPA-209ENST00000585042 PALD1Q9ULE6 856 aa18.33■□□□□ 0.52
VAPA-209ENST00000585042 DOCK3Q8IZD9 2030 aa18.33■□□□□ 0.52
VAPA-209ENST00000585042 CYP7A1P22680 504 aa18.32■□□□□ 0.52
VAPA-209ENST00000585042 IRX3P78415 501 aaPredicted RBP18.32■□□□□ 0.52
VAPA-209ENST00000585042 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
VAPA-209ENST00000585042 GTF3C2Q8WUA4 911 aaPredicted RBP18.32■□□□□ 0.52
VAPA-209ENST00000585042 EAF2Q96CJ1 260 aaPredicted RBP18.32■□□□□ 0.52
VAPA-209ENST00000585042 DNAJC18Q9H819 358 aa18.32■□□□□ 0.52
VAPA-209ENST00000585042 PIH1D3Q9NQM4 214 aaKnown RBP18.32■□□□□ 0.52
VAPA-209ENST00000585042 FOCADQ5VW36 1801 aa18.32■□□□□ 0.52
VAPA-209ENST00000585042 HMGCRP04035 888 aa18.31■□□□□ 0.52
VAPA-209ENST00000585042 MTMR2Q13614 643 aa18.31■□□□□ 0.52
VAPA-209ENST00000585042 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
VAPA-209ENST00000585042 ANKLE1Q8NAG6 615 aa18.31■□□□□ 0.52
VAPA-209ENST00000585042 DEFB118Q96PH6 123 aa18.31■□□□□ 0.52
VAPA-209ENST00000585042 CCDC8Q9H0W5 538 aaPredicted RBP18.31■□□□□ 0.52
VAPA-209ENST00000585042 RPTORQ8N122 1335 aa18.3■□□□□ 0.52
VAPA-209ENST00000585042 RLBP1P12271 317 aa18.3■□□□□ 0.52
VAPA-209ENST00000585042 XRCC5P13010 732 aaKnown RBP18.3■□□□□ 0.52
VAPA-209ENST00000585042 MAP3K12Q12852 859 aa18.3■□□□□ 0.52
VAPA-209ENST00000585042 TATDN1Q6P1N9 297 aa18.3■□□□□ 0.52
VAPA-209ENST00000585042 CEP85Q6P2H3 762 aa18.3■□□□□ 0.52
VAPA-209ENST00000585042 TRMT44Q8IYL2 757 aaKnown RBP18.3■□□□□ 0.52
VAPA-209ENST00000585042 GPRC5AQ8NFJ5 357 aa18.3■□□□□ 0.52
VAPA-209ENST00000585042 P2RX7Q99572 595 aaKnown RBP18.3■□□□□ 0.52
VAPA-209ENST00000585042 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
VAPA-209ENST00000585042 ZBTB21Q9ULJ3 1066 aa18.3■□□□□ 0.52
VAPA-209ENST00000585042 SIPA1L1O43166 1804 aa18.3■□□□□ 0.52
VAPA-209ENST00000585042 CDK5RAP2Q96SN8 1893 aa18.29■□□□□ 0.52
VAPA-209ENST00000585042 IDH1O75874 414 aaKnown RBP18.29■□□□□ 0.52
VAPA-209ENST00000585042 MS4A1P11836 297 aa18.29■□□□□ 0.52
VAPA-209ENST00000585042 HERVK_113P62684 666 aa18.29■□□□□ 0.52
VAPA-209ENST00000585042 JAG1P78504 1218 aa18.29■□□□□ 0.52
VAPA-209ENST00000585042 CHRDL2Q6WN34 429 aa18.29■□□□□ 0.52
VAPA-209ENST00000585042 TTC6Q86TZ1 520 aa18.29■□□□□ 0.52
VAPA-209ENST00000585042 MIER1Q8N108 512 aa18.29■□□□□ 0.52
VAPA-209ENST00000585042 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.523e-10■■■■■ 28.4
VAPA-209ENST00000585042 EHD4Q9H223 541 aa18.29■□□□□ 0.52
VAPA-209ENST00000585042 HMX1Q9NP08 348 aaPredicted RBP18.29■□□□□ 0.52
VAPA-209ENST00000585042 TAOK2Q9UL54 1235 aa18.29■□□□□ 0.52
VAPA-209ENST00000585042 EVI5O60447 810 aa18.28■□□□□ 0.52
VAPA-209ENST00000585042 MAPK4P31152 587 aa18.28■□□□□ 0.52
VAPA-209ENST00000585042 DYNLL1P63167 89 aaKnown RBP18.28■□□□□ 0.52
VAPA-209ENST00000585042 USP17L2Q6R6M4 530 aa18.28■□□□□ 0.52
VAPA-209ENST00000585042 NECAB2Q7Z6G3 386 aa18.28■□□□□ 0.52
VAPA-209ENST00000585042 SOCS4Q8WXH5 440 aa18.28■□□□□ 0.52
VAPA-209ENST00000585042 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
VAPA-209ENST00000585042 PRO3102Q9H379 93 aa18.28■□□□□ 0.52
VAPA-209ENST00000585042 TLR7Q9NYK1 1049 aaKnown RBP18.28■□□□□ 0.52
VAPA-209ENST00000585042 MYO5AQ9Y4I1 1855 aaKnown RBP18.27■□□□□ 0.52
VAPA-209ENST00000585042 A0A1W2PPC1 479 aa18.27■□□□□ 0.52
VAPA-209ENST00000585042 USP5P45974 858 aa18.27■□□□□ 0.52
VAPA-209ENST00000585042 TTF1Q15361 905 aaPredicted RBP18.27■□□□□ 0.52
VAPA-209ENST00000585042 MAGEB6Q8N7X4 407 aa18.27■□□□□ 0.52
VAPA-209ENST00000585042 C12orf42Q96LP6 360 aa18.27■□□□□ 0.52
VAPA-209ENST00000585042 RBM27Q9P2N5 1060 aaKnown RBP18.27■□□□□ 0.52
VAPA-209ENST00000585042 RBPJLQ9UBG7 517 aa18.27■□□□□ 0.52
VAPA-209ENST00000585042 SAP30BPQ9UHR5 308 aaKnown RBP18.27■□□□□ 0.52
VAPA-209ENST00000585042 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
VAPA-209ENST00000585042 GDF11O95390 407 aa18.26■□□□□ 0.51
VAPA-209ENST00000585042 EMILIN3Q9NT22 766 aa18.26■□□□□ 0.51
VAPA-209ENST00000585042 GH2P01242 217 aa18.25■□□□□ 0.51
VAPA-209ENST00000585042 USP14P54578 494 aa18.25■□□□□ 0.51
VAPA-209ENST00000585042 ERVK-9P63128 1117 aa18.25■□□□□ 0.51
VAPA-209ENST00000585042 ERVK-24P63145 666 aa18.25■□□□□ 0.51
VAPA-209ENST00000585042 MAP3K21Q5TCX8 1036 aa18.25■□□□□ 0.51
VAPA-209ENST00000585042 AACSQ86V21 672 aa18.25■□□□□ 0.51
VAPA-209ENST00000585042 MIGA1Q8NAN2 632 aa18.25■□□□□ 0.51
VAPA-209ENST00000585042 PAWRQ96IZ0 340 aaKnown RBP18.25■□□□□ 0.51
VAPA-209ENST00000585042 KIAA1683Q9H0B3 1180 aa18.25■□□□□ 0.51
VAPA-209ENST00000585042 TXNRD2Q9NNW7 524 aa18.25■□□□□ 0.51
VAPA-209ENST00000585042 TRIOBPQ9H2D6 2365 aa18.25■□□□□ 0.51
VAPA-209ENST00000585042 MYH1P12882 1939 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 USP17L15C9J2P7 530 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 USP17L13C9JLJ4 530 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 USP17L11C9JVI0 530 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 USP17L18D6R9N7 530 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 USP17L22D6RA61 530 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 USP17L17D6RBQ6 530 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 USP17L19D6RCP7 530 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 USP17L20D6RJB6 530 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 USP17L24Q0WX57 530 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 PDE3AQ14432 1141 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 CERKLQ49MI3 558 aaPredicted RBP18.24■□□□□ 0.51
VAPA-209ENST00000585042 CCAR1Q8IX12 1150 aaKnown RBP18.24■□□□□ 0.51
VAPA-209ENST00000585042 RPAP2Q8IXW5 612 aaPredicted RBP18.24■□□□□ 0.51
VAPA-209ENST00000585042 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.24■□□□□ 0.51
VAPA-209ENST00000585042 USP6NLQ92738 828 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 ANTXR1Q9H6X2 564 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 CABP5Q9NP86 173 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 EXOC6BQ9Y2D4 811 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 RABGAP1Q9Y3P9 1069 aa18.24■□□□□ 0.51
VAPA-209ENST00000585042 ZBED9Q6R2W3 1325 aa18.23■□□□□ 0.51
VAPA-209ENST00000585042 Q3C1V9 767 aa18.23■□□□□ 0.51
VAPA-209ENST00000585042 LBX2Q6XYB7 198 aa18.23■□□□□ 0.51
VAPA-209ENST00000585042 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
VAPA-209ENST00000585042 TRIB2Q92519 343 aa18.23■□□□□ 0.51
VAPA-209ENST00000585042 RIOK1Q9BRS2 568 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms