RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 CCDC152Q4G0S7 254 aa14.52□□□□□ -0.08
ITGB4-212ENST00000584558 PUF60Q9UHX1 559 aaKnown RBP14.52□□□□□ -0.08
ITGB4-212ENST00000584558 ADD1P35611 737 aaKnown RBP14.52□□□□□ -0.09
ITGB4-212ENST00000584558 KRT32Q14532 448 aa14.52□□□□□ -0.09
ITGB4-212ENST00000584558 DEFB132Q7Z7B7 95 aa14.52□□□□□ -0.09
ITGB4-212ENST00000584558 TADA2BQ86TJ2 420 aa14.52□□□□□ -0.09
ITGB4-212ENST00000584558 EFCAB13Q8IY85 973 aa14.52□□□□□ -0.09
ITGB4-212ENST00000584558 ANKRD20A12PQ8NF67 263 aa14.52□□□□□ -0.09
ITGB4-212ENST00000584558 CCDC12Q8WUD4 166 aaPredicted RBP14.52□□□□□ -0.09
ITGB4-212ENST00000584558 LPIN2Q92539 896 aa14.52□□□□□ -0.09
ITGB4-212ENST00000584558 ZNF622Q969S3 477 aaKnown RBP eCLIP14.52□□□□□ -0.09
ITGB4-212ENST00000584558 ZFYP08048 801 aaPredicted RBP14.52□□□□□ -0.09
ITGB4-212ENST00000584558 HSPD1P10809 573 aaKnown RBP14.52□□□□□ -0.09
ITGB4-212ENST00000584558 MAP2K2P36507 400 aa14.52□□□□□ -0.09
ITGB4-212ENST00000584558 STOX1Q6ZVD7 989 aa14.52□□□□□ -0.09
ITGB4-212ENST00000584558 LRRC4BQ9NT99 713 aa14.52□□□□□ -0.09
ITGB4-212ENST00000584558 KIAA1468Q9P260 1216 aa14.52□□□□□ -0.09
ITGB4-212ENST00000584558 UBASH3AP57075 661 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 CHMP4BP1P59074 171 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 GUCY1B3Q02153 619 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 BEND6Q5SZJ8 279 aaPredicted RBP14.51□□□□□ -0.09
ITGB4-212ENST00000584558 CCDC102BQ68D86 513 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 DPF2Q92785 391 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 NARFQ9UHQ1 456 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 PHKA1P46020 1223 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 MNAT1P51948 309 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 KARSQ15046 597 aaKnown RBP14.51□□□□□ -0.09
ITGB4-212ENST00000584558 ERFEQ4G0M1 354 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 PROM2Q8N271 834 aa14.51□□□□□ -0.09
ITGB4-212ENST00000584558 MRPS27Q92552 414 aaKnown RBP14.51□□□□□ -0.09
ITGB4-212ENST00000584558 TOP1P11387 765 aaKnown RBP14.5□□□□□ -0.09
ITGB4-212ENST00000584558 SF3B3Q15393 1217 aaKnown RBP14.5□□□□□ -0.09
ITGB4-212ENST00000584558 TBC1D9BQ66K14 1250 aa14.5□□□□□ -0.09
ITGB4-212ENST00000584558 HELBQ8NG08 1087 aaPredicted RBP14.5□□□□□ -0.09
ITGB4-212ENST00000584558 NDUFA8P51970 172 aa14.5□□□□□ -0.09
ITGB4-212ENST00000584558 SLC10A5Q5PT55 438 aa14.5□□□□□ -0.09
ITGB4-212ENST00000584558 SWT1Q5T5J6 900 aaKnown RBP14.5□□□□□ -0.09
ITGB4-212ENST00000584558 FMR1NBQ8N0W7 255 aaPredicted RBP14.5□□□□□ -0.09
ITGB4-212ENST00000584558 PDILTQ8N807 584 aa14.5□□□□□ -0.09
ITGB4-212ENST00000584558 NEK1Q96PY6 1258 aa14.5□□□□□ -0.09
ITGB4-212ENST00000584558 FAM204AQ9H8W3 233 aa14.5□□□□□ -0.09
ITGB4-212ENST00000584558 ABCB6Q9NP58 842 aa14.5□□□□□ -0.09
ITGB4-212ENST00000584558 CCNL1Q9UK58 526 aaPredicted RBP14.5□□□□□ -0.09
ITGB4-212ENST00000584558 TAF1P21675 1872 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 A0A0G2JLW4 131 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 ARHGAP6O43182 974 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 ERLIN1O75477 346 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 APBA3O96018 575 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 NCAPHQ15003 741 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 DHX37Q8IY37 1157 aaKnown RBP14.49□□□□□ -0.09
ITGB4-212ENST00000584558 APPBP2Q92624 585 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 PNKPQ96T60 521 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 LRRC2Q9BYS8 371 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 PIH1D3Q9NQM4 214 aaKnown RBP14.49□□□□□ -0.09
ITGB4-212ENST00000584558 SUFUQ9UMX1 484 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 UQCRFS1P1P0C7P4 283 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 DNAJC21Q5F1R6 531 aaKnown RBP14.49□□□□□ -0.09
ITGB4-212ENST00000584558 FAM196AQ6ZSG2 479 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 ZNF396Q96N95 335 aaPredicted RBP14.49□□□□□ -0.09
ITGB4-212ENST00000584558 ANKZF1Q9H8Y5 726 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 PCDHA7Q9UN72 937 aa14.49□□□□□ -0.09
ITGB4-212ENST00000584558 TMEM232C9JQI7 657 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 WDHD1O75717 1129 aaPredicted RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 ADD2P35612 726 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 LIG3P49916 1009 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 GSCP56915 257 aaPredicted RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 TOGARAM2Q6ZUX3 1019 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 ILDR2Q71H61 639 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 KIFC2Q96AC6 838 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 CEP89Q96ST8 783 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 BPIFA3Q9BQP9 254 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 DESI2Q9BSY9 194 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 PUS7LQ9H0K6 701 aaKnown RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 DONSONQ9NYP3 566 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 SRP68Q9UHB9 627 aaKnown RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 KCNG1Q9UIX4 513 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 A0A087WUV0 522 aaPredicted RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 PPFIA4O75335 1185 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 CPP00450 1065 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 SLC3A2P08195 630 aaKnown RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 RHOXF2BP0C7M4 288 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 EN1Q05925 392 aaPredicted RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 SF3A1Q15459 793 aaKnown RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 Q6ZUG5 572 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 RHOXF2Q9BQY4 288 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 IRX2Q9BZI1 471 aaPredicted RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 SNAP23O00161 211 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 ERLIN2O94905 339 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 SLC5A1P13866 664 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 IGHMBP2P38935 993 aaKnown RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 TTF1Q15361 905 aaPredicted RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 FCHSD1Q86WN1 690 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 FAM212AQ96EL1 285 aa14.48□□□□□ -0.09
ITGB4-212ENST00000584558 BAG1Q99933 345 aaPredicted RBP14.48□□□□□ -0.09
ITGB4-212ENST00000584558 GOLGA6L9A6NEM1 432 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 GNPATO15228 680 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 NLRP12P59046 1061 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 CASP8Q14790 479 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 HSP90AA4PQ58FG1 418 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms