RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 FAM87AP0C7U9 286 aa7.98□□□□□ -1.13
NF1-223ENST00000584328 LIG3P49916 1009 aa7.98□□□□□ -1.13
NF1-223ENST00000584328 ST13P50502 369 aaKnown RBP7.98□□□□□ -1.13
NF1-223ENST00000584328 INPP5AQ14642 412 aa7.98□□□□□ -1.13
NF1-223ENST00000584328 GAL3ST3Q96A11 431 aa7.98□□□□□ -1.13
NF1-223ENST00000584328 VTI1BQ9UEU0 232 aa7.98□□□□□ -1.13
NF1-223ENST00000584328 TTBK1Q5TCY1 1321 aaPredicted RBP7.98□□□□□ -1.13
NF1-223ENST00000584328 MAP3K1Q13233 1512 aa7.98□□□□□ -1.13
NF1-223ENST00000584328 MAGI3Q5TCQ9 1506 aa7.98□□□□□ -1.13
NF1-223ENST00000584328 FANCGO15287 622 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 NTF4P34130 210 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 RING1Q06587 406 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 MSMPQ1L6U9 139 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 CYP27C1Q4G0S4 372 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 ZBTB37Q5TC79 503 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 TMCO4Q5TGY1 634 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 LRFN4Q6PJG9 635 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.97□□□□□ -1.13
NF1-223ENST00000584328 CRELD1Q96HD1 420 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 BCL2L13Q9BXK5 485 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 PCDHB5Q9Y5E4 795 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 USP31Q70CQ4 1352 aa7.97□□□□□ -1.13
NF1-223ENST00000584328 PRAMEF27A3QJZ7 478 aa7.96□□□□□ -1.14
NF1-223ENST00000584328 ADAMTS4O75173 837 aa7.96□□□□□ -1.14
NF1-223ENST00000584328 SEPT6Q14141 434 aa7.96□□□□□ -1.14
NF1-223ENST00000584328 AGMOQ6ZNB7 445 aa7.96□□□□□ -1.14
NF1-223ENST00000584328 HDXQ7Z353 690 aa7.96□□□□□ -1.14
NF1-223ENST00000584328 PLPPR2Q96GM1 343 aa7.96□□□□□ -1.14
NF1-223ENST00000584328 NOC4LQ9BVI4 516 aaKnown RBP7.96□□□□□ -1.14
NF1-223ENST00000584328 LEFTY1O75610 366 aa7.95□□□□□ -1.14
NF1-223ENST00000584328 RLBP1P12271 317 aa7.95□□□□□ -1.14
NF1-223ENST00000584328 ITGAEP38570 1179 aa7.95□□□□□ -1.14
NF1-223ENST00000584328 CDC37L1Q7L3B6 337 aa7.95□□□□□ -1.14
NF1-223ENST00000584328 UBE3DQ7Z6J8 389 aa7.95□□□□□ -1.14
NF1-223ENST00000584328 GIPC2Q8TF65 315 aa7.95□□□□□ -1.14
NF1-223ENST00000584328 PSMG3-AS1Q96PY0 264 aa7.95□□□□□ -1.14
NF1-223ENST00000584328 TROQ12816 1431 aaPredicted RBP7.95□□□□□ -1.14
NF1-223ENST00000584328 KIF13AQ9H1H9 1805 aa7.94□□□□□ -1.14
NF1-223ENST00000584328 ABCA9Q8IUA7 1624 aa7.94□□□□□ -1.14
NF1-223ENST00000584328 MAP3K4Q9Y6R4 1608 aa7.94□□□□□ -1.14
NF1-223ENST00000584328 WNT11O96014 354 aa7.94□□□□□ -1.14
NF1-223ENST00000584328 CDK8P49336 464 aa7.94□□□□□ -1.14
NF1-223ENST00000584328 WIPI1Q5MNZ9 446 aaPredicted RBP7.94□□□□□ -1.14
NF1-223ENST00000584328 CYFIP1Q7L576 1253 aa7.94□□□□□ -1.14
NF1-223ENST00000584328 TOP6BLQ8N6T0 577 aa7.94□□□□□ -1.14
NF1-223ENST00000584328 DUSP23Q9BVJ7 150 aa7.94□□□□□ -1.14
NF1-223ENST00000584328 MIR1-1HGQ9H1L0 117 aa7.94□□□□□ -1.14
NF1-223ENST00000584328 ZC3H7BQ9UGR2 993 aaKnown RBP7.94□□□□□ -1.14
NF1-223ENST00000584328 SNCAIPQ9Y6H5 919 aa7.94□□□□□ -1.14
NF1-223ENST00000584328 TIAM1Q13009 1591 aa7.93□□□□□ -1.14
NF1-223ENST00000584328 TFE3P19532 575 aaPredicted RBP7.93□□□□□ -1.14
NF1-223ENST00000584328 GP2P55259 537 aaKnown RBP7.93□□□□□ -1.14
NF1-223ENST00000584328 ZNF326Q5BKZ1 582 aaKnown RBP7.93□□□□□ -1.14
NF1-223ENST00000584328 KCT2Q8NC54 265 aa7.93□□□□□ -1.14
NF1-223ENST00000584328 ZNF507Q8TCN5 953 aa7.93□□□□□ -1.14
NF1-223ENST00000584328 BSDC1Q9NW68 430 aaPredicted RBP7.93□□□□□ -1.14
NF1-223ENST00000584328 ANGEL1Q9UNK9 670 aaKnown RBP7.93□□□□□ -1.14
NF1-223ENST00000584328 TLR6Q9Y2C9 796 aa7.93□□□□□ -1.14
NF1-223ENST00000584328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.93□□□□□ -1.14
NF1-223ENST00000584328 CFAP43Q8NDM7 1665 aa7.92□□□□□ -1.14
NF1-223ENST00000584328 WNT10AQ9GZT5 417 aa7.92□□□□□ -1.14
NF1-223ENST00000584328 CCDC39Q9UFE4 941 aa7.92□□□□□ -1.14
NF1-223ENST00000584328 ARAP3Q8WWN8 1544 aa7.92□□□□□ -1.14
NF1-223ENST00000584328 PPRC1Q5VV67 1664 aaKnown RBP7.92□□□□□ -1.14
NF1-223ENST00000584328 PLEKHD1A6NEE1 506 aa7.91□□□□□ -1.14
NF1-223ENST00000584328 F6X3S4 739 aa7.91□□□□□ -1.14
NF1-223ENST00000584328 PRNPP04156 253 aa7.91□□□□□ -1.14
NF1-223ENST00000584328 ETF1P62495 437 aaKnown RBP7.91□□□□□ -1.14
NF1-223ENST00000584328 FAM181AQ8N9Y4 354 aa7.91□□□□□ -1.14
NF1-223ENST00000584328 PHC3Q8NDX5 983 aa7.91□□□□□ -1.14
NF1-223ENST00000584328 JARID2Q92833 1246 aaPredicted RBP7.91□□□□□ -1.14
NF1-223ENST00000584328 PRDM10Q9NQV6 1147 aa7.91□□□□□ -1.14
NF1-223ENST00000584328 OAS3Q9Y6K5 1087 aaKnown RBP7.91□□□□□ -1.14
NF1-223ENST00000584328 EHBP1L1Q8N3D4 1523 aa7.91□□□□□ -1.14
NF1-223ENST00000584328 TTC37Q6PGP7 1564 aa7.91□□□□□ -1.14
NF1-223ENST00000584328 KIF14Q15058 1648 aa7.9□□□□□ -1.14
NF1-223ENST00000584328 LRRC9Q6ZRR7 1453 aa7.9□□□□□ -1.14
NF1-223ENST00000584328 ARHGAP27Q6ZUM4 889 aa7.9□□□□□ -1.14
NF1-223ENST00000584328 ARMCX6Q7L4S7 300 aa7.9□□□□□ -1.14
NF1-223ENST00000584328 VSIG10LQ86VR7 867 aa7.9□□□□□ -1.14
NF1-223ENST00000584328 FBRSQ9HAH7 460 aa7.9□□□□□ -1.14
NF1-223ENST00000584328 CDK11AQ9UQ88 783 aaPredicted RBP7.9□□□□□ -1.14
NF1-223ENST00000584328 PLCH2O75038 1416 aa7.89□□□□□ -1.15
NF1-223ENST00000584328 GFRA2O00451 464 aa7.89□□□□□ -1.15
NF1-223ENST00000584328 LRIG2O94898 1065 aa7.89□□□□□ -1.15
NF1-223ENST00000584328 GRK4P32298 578 aa7.89□□□□□ -1.15
NF1-223ENST00000584328 MFAP1P55081 439 aaKnown RBP7.89□□□□□ -1.15
NF1-223ENST00000584328 TSNAXIP1Q2TAA8 658 aa7.89□□□□□ -1.15
NF1-223ENST00000584328 BCL11AQ9H165 835 aa7.89□□□□□ -1.15
NF1-223ENST00000584328 CD109Q6YHK3 1445 aa7.88□□□□□ -1.15
NF1-223ENST00000584328 RPL6Q02878 288 aaKnown RBP7.88□□□□□ -1.15
NF1-223ENST00000584328 SLBPQ14493 270 aaKnown RBP eCLIP7.88□□□□□ -1.15
NF1-223ENST00000584328 RELL1Q8IUW5 271 aa7.88□□□□□ -1.15
NF1-223ENST00000584328 HID1Q8IV36 788 aa7.88□□□□□ -1.15
NF1-223ENST00000584328 PLD6Q8N2A8 252 aaKnown RBP7.88□□□□□ -1.15
NF1-223ENST00000584328 NETO1Q8TDF5 533 aa7.88□□□□□ -1.15
NF1-223ENST00000584328 U3KQE9 123 aa7.88□□□□□ -1.15
NF1-223ENST00000584328 PF4P02776 101 aa7.87□□□□□ -1.15
NF1-223ENST00000584328 GBP2P32456 591 aaPredicted RBP7.87□□□□□ -1.15
NF1-223ENST00000584328 LMNB2Q03252 620 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms