RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ARMC10Q8N2F6 343 aa8.74□□□□□ -1.01
SMARCE1-219ENST00000583294 ACSF2Q96CM8 615 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-219ENST00000583294 KCNF1Q9H3M0 494 aa8.74□□□□□ -1.01
SMARCE1-219ENST00000583294 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 UPK3BL1B0FP48 263 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 CHURC1-FNTBB4DL54 471 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 UPK3BL2E5RIL1 263 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 DNAJA2O60884 412 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 NKG7Q16617 165 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 HID1Q8IV36 788 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 ACSS3Q9H6R3 686 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 TJP2Q9UDY2 1190 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 ADAM30Q9UKF2 790 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 STRIP2Q9ULQ0 834 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 RAXQ9Y2V3 346 aa8.73□□□□□ -1.01
SMARCE1-219ENST00000583294 STK10O94804 968 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 MAP4P27816 1152 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 ETFBP38117 255 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 MLECQ14165 292 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 UVSSAQ2YD98 709 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 FAM20CQ8IXL6 584 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 SHDQ96IW2 340 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 TMEM87BQ96K49 555 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 MYRFLQ96LU7 910 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 PSMG3-AS1Q96PY0 264 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 DPH2Q9BQC3 489 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 YIPF2Q9BWQ6 316 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 SEMA6CQ9H3T2 930 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 ZNF408Q9H9D4 720 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 PCOLCE2Q9UKZ9 415 aa8.72□□□□□ -1.01
SMARCE1-219ENST00000583294 SLC22A31A6NKX4 558 aa8.71□□□□□ -1.02
SMARCE1-219ENST00000583294 DYNC1LI2O43237 492 aaPredicted RBP8.71□□□□□ -1.02
SMARCE1-219ENST00000583294 IMPDH2P12268 514 aa8.71□□□□□ -1.02
SMARCE1-219ENST00000583294 NFKBIBQ15653 356 aa8.71□□□□□ -1.02
SMARCE1-219ENST00000583294 TMEM201Q5SNT2 666 aa8.71□□□□□ -1.02
SMARCE1-219ENST00000583294 RUFY4Q6ZNE9 571 aa8.71□□□□□ -1.02
SMARCE1-219ENST00000583294 FAM13CQ8NE31 585 aa8.71□□□□□ -1.02
SMARCE1-219ENST00000583294 STOML1Q9UBI4 398 aa8.71□□□□□ -1.02
SMARCE1-219ENST00000583294 GIPRP48546 466 aa8.7□□□□□ -1.02
SMARCE1-219ENST00000583294 SLBPQ14493 270 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMARCE1-219ENST00000583294 ARSHQ5FYA8 562 aa8.7□□□□□ -1.02
SMARCE1-219ENST00000583294 OVOS1Q6IE37 1185 aa8.7□□□□□ -1.02
SMARCE1-219ENST00000583294 LSRQ86X29 649 aaPredicted RBP8.7□□□□□ -1.02
SMARCE1-219ENST00000583294 MCATQ8IVS2 390 aaKnown RBP8.7□□□□□ -1.02
SMARCE1-219ENST00000583294 FAM169BQ8N8A8 192 aa8.7□□□□□ -1.02
SMARCE1-219ENST00000583294 KCT2Q8NC54 265 aa8.7□□□□□ -1.02
SMARCE1-219ENST00000583294 XAGE3Q8WTP9 111 aa8.7□□□□□ -1.02
SMARCE1-219ENST00000583294 DNAJC2Q99543 621 aaKnown RBP8.7□□□□□ -1.02
SMARCE1-219ENST00000583294 FAM95CA0A1B0GW59 222 aa8.69□□□□□ -1.02
SMARCE1-219ENST00000583294 DHX15O43143 795 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-219ENST00000583294 LRRFIP1Q32MZ4 808 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-219ENST00000583294 PRAMEF13Q5VWM6 474 aa8.69□□□□□ -1.02
SMARCE1-219ENST00000583294 SLC6A19Q695T7 634 aa8.69□□□□□ -1.02
SMARCE1-219ENST00000583294 BEND4Q6ZU67 534 aa8.69□□□□□ -1.02
SMARCE1-219ENST00000583294 SLC51AQ86UW1 340 aa8.69□□□□□ -1.02
SMARCE1-219ENST00000583294 TMEM40Q8WWA1 233 aa8.69□□□□□ -1.02
SMARCE1-219ENST00000583294 ATG4CQ96DT6 458 aa8.69□□□□□ -1.02
SMARCE1-219ENST00000583294 GMIPQ9P107 970 aa8.69□□□□□ -1.02
SMARCE1-219ENST00000583294 SMAD7O15105 426 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-219ENST00000583294 SSTR4P31391 388 aa8.68□□□□□ -1.02
SMARCE1-219ENST00000583294 YARSP54577 528 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-219ENST00000583294 MAP7Q14244 749 aa8.68□□□□□ -1.02
SMARCE1-219ENST00000583294 MRPL41Q8IXM3 137 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-219ENST00000583294 RBBP8NLQ8NC74 664 aaPredicted RBP8.68□□□□□ -1.02
SMARCE1-219ENST00000583294 UBXN4Q92575 508 aa8.68□□□□□ -1.02
SMARCE1-219ENST00000583294 EZH1Q92800 747 aaPredicted RBP8.68□□□□□ -1.02
SMARCE1-219ENST00000583294 FAM86C2PA6NEL3 165 aa8.67□□□□□ -1.02
SMARCE1-219ENST00000583294 IGLV1-40P01703 118 aa8.67□□□□□ -1.02
SMARCE1-219ENST00000583294 PPP2R5EQ16537 467 aa8.67□□□□□ -1.02
SMARCE1-219ENST00000583294 ANKS3Q6ZW76 656 aa8.67□□□□□ -1.02
SMARCE1-219ENST00000583294 ARMCX6Q7L4S7 300 aa8.67□□□□□ -1.02
SMARCE1-219ENST00000583294 PMFBP1Q8TBY8 1022 aa8.67□□□□□ -1.02
SMARCE1-219ENST00000583294 FOXQ1Q9C009 403 aa8.67□□□□□ -1.02
SMARCE1-219ENST00000583294 HMX2A2RU54 273 aa8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 MEIS3P2A8K0S8 358 aa8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 CST3P01034 146 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 NME1P15531 152 aaKnown RBP8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 RAG1P15918 1043 aa8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 CDK5R2Q13319 367 aa8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 PAOXQ6QHF9 649 aa8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 NLRC3Q7RTR2 1065 aa8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 CLEC10AQ8IUN9 316 aa8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 PHACTR4Q8IZ21 702 aa8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 OR6P1Q8NGX9 317 aa8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 KIF2CQ99661 725 aa8.66□□□□□ -1.02
SMARCE1-219ENST00000583294 MED26O95402 600 aa8.65□□□□□ -1.02
SMARCE1-219ENST00000583294 POLR2BP30876 1174 aaKnown RBP8.65□□□□□ -1.02
SMARCE1-219ENST00000583294 HNRNPLLQ8WVV9 542 aaKnown RBP8.65□□□□□ -1.02
SMARCE1-219ENST00000583294 C7orf69Q9H7B7 122 aa8.65□□□□□ -1.02
SMARCE1-219ENST00000583294 CNNM2Q9H8M5 875 aa8.65□□□□□ -1.02
SMARCE1-219ENST00000583294 PCMTD2Q9NV79 361 aa8.65□□□□□ -1.02
SMARCE1-219ENST00000583294 PRKAG3Q9UGI9 489 aa8.65□□□□□ -1.02
SMARCE1-219ENST00000583294 LRIG2O94898 1065 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 TGFB1P01137 390 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 GUCY2CP25092 1073 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 CAP2P40123 477 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 CDCP2Q5VXM1 449 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 SEZ6L2Q6UXD5 910 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 CKAP2LQ8IYA6 745 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms