RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	CDK5RAP2	Q96SN8	1893 aa		11.52	□□□□□ -0.57
TRIM16-222	ENST00000581224	USP17L3	A6NCW0	530 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	USP17L4	A6NCW7	530 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	TSPY3	P0CV98	308 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	TSPY8	P0CW00	308 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	FDPS	P14324	419 aa	Known RBP	11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	ADD1	P35611	737 aa	Known RBP	11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	KIAA2012	Q0VF49	1180 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	ZSCAN23	Q3MJ62	389 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	USP17L1	Q7RTZ2	530 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	FERMT3	Q86UX7	667 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	ENAH	Q8N8S7	591 aa	Predicted RBP	11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	JMY	Q8N9B5	988 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	GPT2	Q8TD30	523 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	KCNG4	Q8TDN1	519 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	TGFBRAP1	Q8WUH2	860 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	PSMD1	Q99460	953 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	DHX36	Q9H2U1	1008 aa	Known RBP	11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	KAT14	Q9H8E8	782 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	BRMS1	Q9HCU9	246 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	GPHN	Q9NQX3	736 aa	Predicted RBP	11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	DDX19A	Q9NUU7	478 aa	Known RBP	11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	TTF2	Q9UNY4	1162 aa	Known RBP	11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	SLX4	Q8IY92	1834 aa		11.51	□□□□□ -0.57
TRIM16-222	ENST00000581224	CTAGE5	O15320	804 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	YEATS4	O95619	227 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	HLA-DOA	P06340	250 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	DIXDC1	Q155Q3	683 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	NTRK3	Q16288	839 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	LRSAM1	Q6UWE0	723 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	C16orf86	Q6ZW13	317 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	LEO1	Q8WVC0	666 aa	Predicted RBP	11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	C7orf43	Q8WVR3	580 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	FBXW7	Q969H0	707 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	ZDHHC15	Q96MV8	337 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	RTEL1	Q9NZ71	1219 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	SERPINA10	Q9UK55	444 aa		11.5	□□□□□ -0.57
TRIM16-222	ENST00000581224	PRPF3	O43395	683 aa	Known RBP	11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	USP17L8	P0C7I0	530 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	SMARCA1	P28370	1054 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	TFAP4	Q01664	338 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	SF3A1	Q15459	793 aa	Known RBP	11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	NUP133	Q8WUM0	1156 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	CCDC17	Q96LX7	622 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	GPR101	Q96P66	508 aa	Predicted RBP	11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	ZKSCAN3	Q9BRR0	538 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	SLC26A6	Q9BXS9	759 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	FOXP1	Q9H334	677 aa	Predicted RBP	11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	GRPEL1	Q9HAV7	217 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	POLR3E	Q9NVU0	708 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	JAG2	Q9Y219	1238 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	DAGLA	Q9Y4D2	1042 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	ECM29	Q5VYK3	1845 aa		11.49	□□□□□ -0.57
TRIM16-222	ENST00000581224	MYH8	P13535	1937 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	C21orf2	O43822	256 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	ECE2	O60344	883 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	CAVIN2	O95810	425 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	U2AF2	P26368	475 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	CDC27	P30260	824 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	RHBDL3	P58872	404 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	TROAP	Q12815	778 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	DOK7	Q18PE1	504 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	KRT40	Q6A162	431 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	MAPKAPK5	Q8IW41	473 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	NEDD1	Q8NHV4	660 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	INCENP	Q9NQS7	918 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	USP40	Q9NVE5	1235 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	HDAC9	Q9UKV0	1011 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	CEP131	Q9UPN4	1083 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	FLT1	P17948	1338 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	PSME4	Q14997	1843 aa		11.48	□□□□□ -0.57
TRIM16-222	ENST00000581224	DDX60L	Q5H9U9	1706 aa	Known RBP	11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	CYP2D7	A0A087X1C5	515 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	BMP15	O95972	392 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	CALML3	P27482	149 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	CDK8	P49336	464 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	RASSF7	Q02833	373 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	STK38	Q15208	465 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	RILPL1	Q5EBL4	403 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	DACT2	Q5SW24	774 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	MYSM1	Q5VVJ2	828 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	GALNT17	Q6IS24	598 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	CCDC73	Q6ZRK6	1079 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	EHD4	Q9H223	541 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	GDPD2	Q9HCC8	539 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	SH3GLB2	Q9NR46	395 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	TFIP11	Q9UBB9	837 aa	Known RBP	11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224	TACC3	Q9Y6A5	838 aa		11.47	□□□□□ -0.57
TRIM16-222	ENST00000581224		A0A1W2PQ27	194 aa		11.46	□□□□□ -0.57
TRIM16-222	ENST00000581224		A0A1W2PQ64	194 aa		11.46	□□□□□ -0.57
TRIM16-222	ENST00000581224		A0A1W2PQD8	194 aa		11.46	□□□□□ -0.57
TRIM16-222	ENST00000581224	PPIP5K2	O43314	1243 aa		11.46	□□□□□ -0.57
TRIM16-222	ENST00000581224	GADD45B	O75293	160 aa	Predicted RBP	11.46	□□□□□ -0.57
TRIM16-222	ENST00000581224	PRDM1	O75626	825 aa		11.46	□□□□□ -0.57
TRIM16-222	ENST00000581224	MMP1	P03956	469 aa		11.46	□□□□□ -0.57
TRIM16-222	ENST00000581224	TOP1	P11387	765 aa	Known RBP	11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms