RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 PHF12Q96QT6 1004 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 MXD3Q9BW11 206 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 CXXC1Q9P0U4 656 aaPredicted RBP4.22□□□□□ -1.73
CDH19-204ENST00000579658 ZNF112Q9UJU3 913 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 SUGT1Q9Y2Z0 365 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 DOCK1Q14185 1865 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 DOCK2Q92608 1830 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 POM121CA8CG34 1229 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 NEURL1BA8MQ27 555 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 EMP3P54852 163 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 BEND3Q5T5X7 828 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 TBC1D22AQ8WUA7 517 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 FRAT1Q92837 279 aaPredicted RBP4.22□□□□□ -1.73
CDH19-204ENST00000579658 CCDC85AQ96PX6 553 aaPredicted RBP4.22□□□□□ -1.73
CDH19-204ENST00000579658 FZD1Q9UP38 647 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 PTPRFP10586 1907 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 PFASO15067 1338 aa4.22□□□□□ -1.73
CDH19-204ENST00000579658 A0A0G2JLL6 359 aaPredicted RBP4.21□□□□□ -1.73
CDH19-204ENST00000579658 ELNP15502 786 aa4.21□□□□□ -1.73
CDH19-204ENST00000579658 MDM2Q00987 491 aaPredicted RBP4.21□□□□□ -1.73
CDH19-204ENST00000579658 ALDH1L2Q3SY69 923 aa4.21□□□□□ -1.73
CDH19-204ENST00000579658 PRRT2Q7Z6L0 340 aaPredicted RBP4.21□□□□□ -1.73
CDH19-204ENST00000579658 CERS5Q8N5B7 392 aa4.21□□□□□ -1.73
CDH19-204ENST00000579658 TDRD7Q8NHU6 1098 aaKnown RBP4.21□□□□□ -1.73
CDH19-204ENST00000579658 LRFN3Q9BTN0 628 aa4.21□□□□□ -1.73
CDH19-204ENST00000579658 PLA2G12BQ9BX93 195 aa4.21□□□□□ -1.73
CDH19-204ENST00000579658 PLXNB2O15031 1838 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.21□□□□□ -1.74
CDH19-204ENST00000579658 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.21□□□□□ -1.74
CDH19-204ENST00000579658 RLBP1P12271 317 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 CASP7P55210 303 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 MOGSQ13724 837 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 GCKRQ14397 625 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 EPHA10Q5JZY3 1008 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 C1orf53Q5VUE5 145 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 GPAT2Q6NUI2 795 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 DZIP1LQ8IYY4 767 aaKnown RBP4.21□□□□□ -1.74
CDH19-204ENST00000579658 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.21□□□□□ -1.74
CDH19-204ENST00000579658 SMCR8Q8TEV9 937 aaPredicted RBP4.21□□□□□ -1.74
CDH19-204ENST00000579658 FAM161BQ96MY7 647 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 MPHOSPH8Q99549 860 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 TTYH1Q9H313 450 aaPredicted RBP4.21□□□□□ -1.74
CDH19-204ENST00000579658 RAPGEFL1Q9UHV5 662 aa4.21□□□□□ -1.74
CDH19-204ENST00000579658 RLFQ13129 1914 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 AK9Q5TCS8 1911 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 H7C1W4 665 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 NBPF7P0C2Y1 421 aaPredicted RBP4.2□□□□□ -1.74
CDH19-204ENST00000579658 TRIM27P14373 513 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 CRKP46108 304 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 LRRC26Q2I0M4 334 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 SH3D19Q5HYK7 790 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 C20orf194Q5TEA3 1177 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 UBE3BQ7Z3V4 1068 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 ZNF467Q7Z7K2 595 aaPredicted RBP4.2□□□□□ -1.74
CDH19-204ENST00000579658 TTLL11Q8NHH1 800 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 TEKT1Q969V4 418 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 HS3ST6Q96QI5 342 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 AGTPBP1Q9UPW5 1226 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 PHIPQ8WWQ0 1821 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 DNM1LO00429 736 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 CT47B1P0C2W7 299 aaPredicted RBP4.2□□□□□ -1.74
CDH19-204ENST00000579658 ZKSCAN1P17029 563 aaPredicted RBP4.2□□□□□ -1.74
CDH19-204ENST00000579658 PDE3AQ14432 1141 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 ALYREFQ86V81 257 aaKnown RBP4.2□□□□□ -1.74
CDH19-204ENST00000579658 LINS1Q8NG48 757 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 PANK1Q8TE04 598 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 FAM151AQ8WW52 585 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 KAZALD1Q96I82 304 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 SUCLG2Q96I99 432 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 TMEM39BQ9GZU3 492 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 TDRD3Q9H7E2 651 aaKnown RBP4.2□□□□□ -1.74
CDH19-204ENST00000579658 PICK1Q9NRD5 415 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 MORF4L1Q9UBU8 362 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 TTF2Q9UNY4 1162 aaKnown RBP4.2□□□□□ -1.74
CDH19-204ENST00000579658 COG5Q9UP83 839 aa4.2□□□□□ -1.74
CDH19-204ENST00000579658 PRR33A8MZF0 331 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 TCP10L2B9ZVM9 353 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 MRE11P49959 708 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 NEXNQ0ZGT2 675 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 SNX17Q15036 470 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 SHHQ15465 462 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 RAB30Q15771 203 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 SCYL3Q8IZE3 742 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 TMEM57Q8N5G2 664 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 ZDHHC15Q96MV8 337 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 IPO9Q96P70 1041 aaKnown RBP4.19□□□□□ -1.74
CDH19-204ENST00000579658 NUDT12Q9BQG2 462 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 TMUB1Q9BVT8 246 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 SRCIN1Q9C0H9 1055 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 USP44Q9H0E7 712 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 KIAA1522Q9P206 1035 aaPredicted RBP4.19□□□□□ -1.74
CDH19-204ENST00000579658 RCAN3Q9UKA8 241 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 NOP58Q9Y2X3 529 aaKnown RBP4.19□□□□□ -1.74
CDH19-204ENST00000579658 LRRC37A2A6NM11 1700 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 ZNF236Q9UL36 1845 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 GLRX3O76003 335 aaKnown RBP4.19□□□□□ -1.74
CDH19-204ENST00000579658 MAPK4P31152 587 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 RGS2P41220 211 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 RTP1P59025 263 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 FOXO4P98177 505 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms