RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 ZKSCAN2Q63HK3 967 aa23.53■■□□□ 1.36
CDKN2A-213ENST00000579122 ADGRA1Q86SQ6 560 aa23.53■■□□□ 1.36
CDKN2A-213ENST00000579122 TRIM34Q9BYJ4 488 aa23.53■■□□□ 1.36
CDKN2A-213ENST00000579122 HMX1Q9NP08 348 aaPredicted RBP23.53■■□□□ 1.36
CDKN2A-213ENST00000579122 RPTORQ8N122 1335 aa23.53■■□□□ 1.36
CDKN2A-213ENST00000579122 JAG1P78504 1218 aa23.52■■□□□ 1.36
CDKN2A-213ENST00000579122 ATP8B2P98198 1209 aa23.52■■□□□ 1.36
CDKN2A-213ENST00000579122 CRACR2BQ8N4Y2 399 aaPredicted RBP23.52■■□□□ 1.36
CDKN2A-213ENST00000579122 P2RX7Q99572 595 aaKnown RBP23.52■■□□□ 1.36
CDKN2A-213ENST00000579122 DIS3LQ8TF46 1054 aaKnown RBP23.51■■□□□ 1.35
CDKN2A-213ENST00000579122 PALD1Q9ULE6 856 aa23.51■■□□□ 1.35
CDKN2A-213ENST00000579122 LAMA3Q16787 3333 aa23.5■■□□□ 1.35
CDKN2A-213ENST00000579122 FOCADQ5VW36 1801 aa23.5■■□□□ 1.35
CDKN2A-213ENST00000579122 USP17L10C9JJH3 530 aa23.5■■□□□ 1.35
CDKN2A-213ENST00000579122 SURF6O75683 361 aaKnown RBP23.5■■□□□ 1.35
CDKN2A-213ENST00000579122 ZAP70P43403 619 aa23.5■■□□□ 1.35
CDKN2A-213ENST00000579122 HERVK_113P62684 666 aa23.5■■□□□ 1.35
CDKN2A-213ENST00000579122 TRIM32Q13049 653 aa23.5■■□□□ 1.35
CDKN2A-213ENST00000579122 GPRC5AQ8NFJ5 357 aa23.5■■□□□ 1.35
CDKN2A-213ENST00000579122 ZBTB21Q9ULJ3 1066 aa23.5■■□□□ 1.35
CDKN2A-213ENST00000579122 GDF11O95390 407 aa23.49■■□□□ 1.35
CDKN2A-213ENST00000579122 HLA-DOAP06340 250 aa23.49■■□□□ 1.35
CDKN2A-213ENST00000579122 TRIB2Q92519 343 aa23.49■■□□□ 1.35
CDKN2A-213ENST00000579122 PIH1D3Q9NQM4 214 aaKnown RBP23.49■■□□□ 1.35
CDKN2A-213ENST00000579122 PLXNB2O15031 1838 aa23.49■■□□□ 1.35
CDKN2A-213ENST00000579122 CDK5RAP2Q96SN8 1893 aa23.49■■□□□ 1.35
CDKN2A-213ENST00000579122 XRCC5P13010 732 aaKnown RBP23.48■■□□□ 1.35
CDKN2A-213ENST00000579122 SHROOM1Q2M3G4 852 aaPredicted RBP23.48■■□□□ 1.35
CDKN2A-213ENST00000579122 GTF3C2Q8WUA4 911 aaPredicted RBP23.48■■□□□ 1.35
CDKN2A-213ENST00000579122 SOCS4Q8WXH5 440 aa23.48■■□□□ 1.35
CDKN2A-213ENST00000579122 NUDT12Q9BQG2 462 aa23.48■■□□□ 1.35
CDKN2A-213ENST00000579122 NBPF3Q9H094 633 aa23.48■■□□□ 1.35
CDKN2A-213ENST00000579122 TXNRD2Q9NNW7 524 aa23.48■■□□□ 1.35
CDKN2A-213ENST00000579122 DBNLQ9UJU6 430 aaKnown RBP23.48■■□□□ 1.35
CDKN2A-213ENST00000579122 NOP58Q9Y2X3 529 aaKnown RBP23.48■■□□□ 1.35
CDKN2A-213ENST00000579122 CYP2B6P20813 491 aa23.47■■□□□ 1.35
CDKN2A-213ENST00000579122 MAPK4P31152 587 aa23.47■■□□□ 1.35
CDKN2A-213ENST00000579122 MAP3K21Q5TCX8 1036 aa23.47■■□□□ 1.35
CDKN2A-213ENST00000579122 CERS3Q8IU89 383 aa23.47■■□□□ 1.35
CDKN2A-213ENST00000579122 TRMT44Q8IYL2 757 aaKnown RBP23.47■■□□□ 1.35
CDKN2A-213ENST00000579122 RBPJLQ9UBG7 517 aa23.47■■□□□ 1.35
CDKN2A-213ENST00000579122 STAP2Q9UGK3 403 aa23.47■■□□□ 1.35
CDKN2A-213ENST00000579122 SAP30BPQ9UHR5 308 aaKnown RBP23.47■■□□□ 1.35
CDKN2A-213ENST00000579122 MNX1P50219 401 aaPredicted RBP23.46■■□□□ 1.35
CDKN2A-213ENST00000579122 DYNLL1P63167 89 aaKnown RBP23.46■■□□□ 1.35
CDKN2A-213ENST00000579122 ALPK3Q96L96 1907 aa23.46■■□□□ 1.35
CDKN2A-213ENST00000579122 EMILIN3Q9NT22 766 aa23.46■■□□□ 1.35
CDKN2A-213ENST00000579122 OGDHLQ9ULD0 1010 aa23.46■■□□□ 1.35
CDKN2A-213ENST00000579122 PEX10O60683 326 aa23.45■■□□□ 1.34
CDKN2A-213ENST00000579122 CYP7A1P22680 504 aa23.45■■□□□ 1.34
CDKN2A-213ENST00000579122 ERVK-9P63128 1117 aa23.45■■□□□ 1.34
CDKN2A-213ENST00000579122 ERVK-24P63145 666 aa23.45■■□□□ 1.34
CDKN2A-213ENST00000579122 PDE3AQ14432 1141 aa23.45■■□□□ 1.34
CDKN2A-213ENST00000579122 USP17L2Q6R6M4 530 aa23.45■■□□□ 1.34
CDKN2A-213ENST00000579122 C1orf115Q9H7X2 142 aa23.45■■□□□ 1.34
CDKN2A-213ENST00000579122 TLR7Q9NYK1 1049 aaKnown RBP23.45■■□□□ 1.34
CDKN2A-213ENST00000579122 PRKAR2AP13861 404 aaKnown RBP23.44■■□□□ 1.34
CDKN2A-213ENST00000579122 BMP8BP34820 402 aa23.44■■□□□ 1.34
CDKN2A-213ENST00000579122 C7orf61Q8IZ16 206 aa23.44■■□□□ 1.34
CDKN2A-213ENST00000579122 USP6NLQ92738 828 aa23.44■■□□□ 1.34
CDKN2A-213ENST00000579122 CCDC8Q9H0W5 538 aaPredicted RBP23.44■■□□□ 1.34
CDKN2A-213ENST00000579122 C11orf49Q9H6J7 331 aa23.44■■□□□ 1.34
CDKN2A-213ENST00000579122 MYO5AQ9Y4I1 1855 aaKnown RBP23.44■■□□□ 1.34
CDKN2A-213ENST00000579122 IDH1O75874 414 aaKnown RBP23.43■■□□□ 1.34
CDKN2A-213ENST00000579122 GH2P01242 217 aa23.43■■□□□ 1.34
CDKN2A-213ENST00000579122 Q3C1V9 767 aa23.43■■□□□ 1.34
CDKN2A-213ENST00000579122 TATDN1Q6P1N9 297 aa23.43■■□□□ 1.34
CDKN2A-213ENST00000579122 TMED8Q6PL24 325 aaPredicted RBP23.43■■□□□ 1.34
CDKN2A-213ENST00000579122 CCAR1Q8IX12 1150 aaKnown RBP23.43■■□□□ 1.34
CDKN2A-213ENST00000579122 FTSJ3Q8IY81 847 aaKnown RBP23.43■■□□□ 1.34
CDKN2A-213ENST00000579122 EAF2Q96CJ1 260 aaPredicted RBP23.43■■□□□ 1.34
CDKN2A-213ENST00000579122 C12orf42Q96LP6 360 aa23.43■■□□□ 1.34
CDKN2A-213ENST00000579122 GDF15Q99988 308 aa23.43■■□□□ 1.34
CDKN2A-213ENST00000579122 DDX60LQ5H9U9 1706 aaKnown RBP23.42■■□□□ 1.34
CDKN2A-213ENST00000579122 SOX1O00570 391 aaPredicted RBP23.42■■□□□ 1.34
CDKN2A-213ENST00000579122 ZKSCAN1P17029 563 aaPredicted RBP23.42■■□□□ 1.34
CDKN2A-213ENST00000579122 GPR142Q7Z601 462 aa23.42■■□□□ 1.34
CDKN2A-213ENST00000579122 MIGA1Q8NAN2 632 aa23.42■■□□□ 1.34
CDKN2A-213ENST00000579122 PAGR1Q9BTK6 254 aa23.42■■□□□ 1.34
CDKN2A-213ENST00000579122 EHD4Q9H223 541 aa23.42■■□□□ 1.34
CDKN2A-213ENST00000579122 PORCNQ9H237 461 aa23.42■■□□□ 1.34
CDKN2A-213ENST00000579122 RGS2P41220 211 aa23.41■■□□□ 1.34
CDKN2A-213ENST00000579122 USP5P45974 858 aa23.41■■□□□ 1.34
CDKN2A-213ENST00000579122 MORN1Q5T089 497 aa23.41■■□□□ 1.34
CDKN2A-213ENST00000579122 POTEEQ6S8J3 1075 aa23.41■■□□□ 1.34
CDKN2A-213ENST00000579122 PLEKHH3Q7Z736 793 aa23.41■■□□□ 1.34
CDKN2A-213ENST00000579122 ITPRIPQ8IWB1 547 aa23.41■■□□□ 1.34
CDKN2A-213ENST00000579122 SERPINB13Q9UIV8 391 aa23.41■■□□□ 1.34
CDKN2A-213ENST00000579122 CACNB2Q08289 660 aaPredicted RBP23.4■■□□□ 1.34
CDKN2A-213ENST00000579122 MAGEB6Q8N7X4 407 aa23.4■■□□□ 1.34
CDKN2A-213ENST00000579122 ZMYND8Q9ULU4 1186 aaPredicted RBP23.4■■□□□ 1.34
CDKN2A-213ENST00000579122 RABGAP1Q9Y3P9 1069 aa23.4■■□□□ 1.34
CDKN2A-213ENST00000579122 USP17L15C9J2P7 530 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 USP17L13C9JLJ4 530 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 USP17L11C9JVI0 530 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 USP17L18D6R9N7 530 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 USP17L22D6RA61 530 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 USP17L17D6RBQ6 530 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 USP17L19D6RCP7 530 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 USP17L20D6RJB6 530 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms