RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 WFDC8Q8IUA0 241 aa6.51□□□□□ -1.37
KRT39-202ENST00000578029 WDR89Q96FK6 387 aaPredicted RBP6.51□□□□□ -1.37
KRT39-202ENST00000578029 KLHDC7BQ96G42 594 aa6.51□□□□□ -1.37
KRT39-202ENST00000578029 IPO9Q96P70 1041 aaKnown RBP6.51□□□□□ -1.37
KRT39-202ENST00000578029 USP26Q9BXU7 913 aa6.51□□□□□ -1.37
KRT39-202ENST00000578029 PICK1Q9NRD5 415 aa6.51□□□□□ -1.37
KRT39-202ENST00000578029 CHPF2Q9P2E5 772 aa6.51□□□□□ -1.37
KRT39-202ENST00000578029 CSADQ9Y600 493 aa6.51□□□□□ -1.37
KRT39-202ENST00000578029 LILRB5O75023 590 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 CTSBP07858 339 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 MYCLP1P12525 358 aaPredicted RBP6.5□□□□□ -1.37
KRT39-202ENST00000578029 AFF1P51825 1210 aaKnown RBP6.5□□□□□ -1.37
KRT39-202ENST00000578029 ERVK-24P63145 666 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 PABPC4Q13310 644 aaKnown RBP eCLIP6.5□□□□□ -1.37
KRT39-202ENST00000578029 GAS6Q14393 721 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 SV2CQ496J9 727 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 MAP4K3Q8IVH8 894 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 DHX37Q8IY37 1157 aaKnown RBP6.5□□□□□ -1.37
KRT39-202ENST00000578029 PRPF38AQ8NAV1 312 aaKnown RBP6.5□□□□□ -1.37
KRT39-202ENST00000578029 FAM13CQ8NE31 585 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 ACSF2Q96CM8 615 aaPredicted RBP6.5□□□□□ -1.37
KRT39-202ENST00000578029 KIF2CQ99661 725 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 CARD10Q9BWT7 1032 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 CAAP1Q9H8G2 361 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 GDF2Q9UK05 429 aaPredicted RBP6.5□□□□□ -1.37
KRT39-202ENST00000578029 STARD13Q9Y3M8 1113 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 ARID4BQ4LE39 1312 aaPredicted RBP6.5□□□□□ -1.37
KRT39-202ENST00000578029 SYNGAP1Q96PV0 1343 aa6.5□□□□□ -1.37
KRT39-202ENST00000578029 C11orf95C9JLR9 678 aaPredicted RBP6.49□□□□□ -1.37
KRT39-202ENST00000578029 EIF5BO60841 1220 aaKnown RBP6.49□□□□□ -1.37
KRT39-202ENST00000578029 AOC2O75106 756 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 SOX5P35711 763 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 PMS1P54277 932 aaKnown RBP6.49□□□□□ -1.37
KRT39-202ENST00000578029 NLRP12P59046 1061 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 RING1Q06587 406 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 MSL1Q68DK7 614 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 SLC6A19Q695T7 634 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 SLCO4C1Q6ZQN7 724 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 THNSL2Q86YJ6 484 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 MCATQ8IVS2 390 aaKnown RBP6.49□□□□□ -1.37
KRT39-202ENST00000578029 SLFN12Q8IYM2 578 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 PHACTR4Q8IZ21 702 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 CDC6Q99741 560 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 DHRS4Q9BTZ2 278 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 RAD18Q9NS91 495 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 G3BP2Q9UN86 482 aaKnown RBP6.49□□□□□ -1.37
KRT39-202ENST00000578029 HIF3AQ9Y2N7 669 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 ATP8A1Q9Y2Q0 1164 aa6.49□□□□□ -1.37
KRT39-202ENST00000578029 TRAV20A0A0B4J274 112 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 LOC100289279A0A1B0GTE1 492 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 ANKRD34BA5PLL1 514 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 IRS4O14654 1257 aaPredicted RBP6.48□□□□□ -1.37
KRT39-202ENST00000578029 PLD2O14939 933 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 FANCGO15287 622 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 ALBP02768 609 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 STAT3P40763 770 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 ID3Q02535 119 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 HSP90AA2PQ14568 343 aaPredicted RBP6.48□□□□□ -1.37
KRT39-202ENST00000578029 FNDC3BQ53EP0 1204 aaKnown RBP6.48□□□□□ -1.37
KRT39-202ENST00000578029 CT47A1Q5JQC4 288 aaPredicted RBP6.48□□□□□ -1.37
KRT39-202ENST00000578029 HID1Q8IV36 788 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 ZNF507Q8TCN5 953 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 SMARCC1Q92922 1105 aaPredicted RBP6.48□□□□□ -1.37
KRT39-202ENST00000578029 KISS1RQ969F8 398 aaPredicted RBP6.48□□□□□ -1.37
KRT39-202ENST00000578029 TMEM87BQ96K49 555 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 APBA2Q99767 749 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 WDR18Q9BV38 432 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 NCOA5Q9HCD5 579 aaKnown RBP6.48□□□□□ -1.37
KRT39-202ENST00000578029 LRP2BPQ9P2M1 347 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 TJP2Q9UDY2 1190 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 PCDHGC5Q9Y5F6 944 aa6.48□□□□□ -1.37
KRT39-202ENST00000578029 IGF1RP08069 1367 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 A0A1W2PQU0 124 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 RGS13O14921 159 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 KCNQ2O43526 872 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 EPXP11678 715 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 POLR2BP30876 1174 aaKnown RBP6.47□□□□□ -1.37
KRT39-202ENST00000578029 L1CAMP32004 1257 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 GBP1P32455 592 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 EXOSC10Q01780 885 aaKnown RBP6.47□□□□□ -1.37
KRT39-202ENST00000578029 CBX2Q14781 532 aaPredicted RBP6.47□□□□□ -1.37
KRT39-202ENST00000578029 PPM1JQ5JR12 505 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 ODR4Q5SWX8 454 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 ZBTB37Q5TC79 503 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 MRPL41Q8IXM3 137 aaKnown RBP6.47□□□□□ -1.37
KRT39-202ENST00000578029 DCAF11Q8TEB1 546 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 JDP2Q8WYK2 163 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 SLC6A18Q96N87 628 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 AARSD1Q9BTE6 412 aaKnown RBP6.47□□□□□ -1.37
KRT39-202ENST00000578029 RUSC1Q9BVN2 902 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 SUCOQ9UBS9 1254 aaKnown RBP6.47□□□□□ -1.37
KRT39-202ENST00000578029 MCM8Q9UJA3 840 aa6.47□□□□□ -1.37
KRT39-202ENST00000578029 MRPS23Q9Y3D9 190 aaKnown RBP6.47□□□□□ -1.37
KRT39-202ENST00000578029 A0A087X0B3 334 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 TRBV23-1A0A0A0MS06 115 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 ALG1L2C9J202 215 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 M0R082 166 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 PDE8AO60658 829 aa6.46□□□□□ -1.38
KRT39-202ENST00000578029 CD68P34810 354 aaPredicted RBP6.46□□□□□ -1.38
KRT39-202ENST00000578029 NFKB2Q00653 900 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms